RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 GUCA2BQ16661 112 aa9.71□□□□□ -0.86
USE1-209ENST00000601592 CD300EQ496F6 205 aaPredicted RBP9.71□□□□□ -0.86
USE1-209ENST00000601592 GGNBP1Q5YKI7 109 aa9.71□□□□□ -0.86
USE1-209ENST00000601592 MZT2BQ6NZ67 158 aa9.71□□□□□ -0.86
USE1-209ENST00000601592 UXS1Q8NBZ7 420 aa9.71□□□□□ -0.86
USE1-209ENST00000601592 TMEM190Q8WZ59 177 aa9.71□□□□□ -0.86
USE1-209ENST00000601592 ATP6V0BQ99437 205 aa9.71□□□□□ -0.86
USE1-209ENST00000601592 TXN2Q99757 166 aa9.71□□□□□ -0.86
USE1-209ENST00000601592 ZNF436Q9C0F3 470 aaPredicted RBP9.71□□□□□ -0.86
USE1-209ENST00000601592 NUDT15Q9NV35 164 aa9.71□□□□□ -0.86
USE1-209ENST00000601592 HSPB7Q9UBY9 170 aa9.71□□□□□ -0.86
USE1-209ENST00000601592 RPS10-NUDT3A0A1W2PQS6 291 aa9.7□□□□□ -0.86
USE1-209ENST00000601592 ADAP1O75689 374 aa9.7□□□□□ -0.86
USE1-209ENST00000601592 IFNA21P01568 189 aa9.7□□□□□ -0.86
USE1-209ENST00000601592 TCRBP04435 133 aa9.7□□□□□ -0.86
USE1-209ENST00000601592 CTSGP08311 255 aa9.7□□□□□ -0.86
USE1-209ENST00000601592 IAPPP10997 89 aa9.7□□□□□ -0.86
USE1-209ENST00000601592 BSXQ3C1V8 233 aa9.7□□□□□ -0.86
USE1-209ENST00000601592 BTNL8Q6UX41 500 aa9.7□□□□□ -0.86
USE1-209ENST00000601592 GTSCR1Q86UQ5 136 aa9.7□□□□□ -0.86
USE1-209ENST00000601592 NOXA1Q86UR1 476 aa9.7□□□□□ -0.86
USE1-209ENST00000601592 OR52B4Q8NGK2 314 aa9.7□□□□□ -0.86
USE1-209ENST00000601592 FNDC4Q9H6D8 234 aaPredicted RBP9.7□□□□□ -0.86
USE1-209ENST00000601592 TECRQ9NZ01 308 aaKnown RBP9.7□□□□□ -0.86
USE1-209ENST00000601592 PAIP2BQ9ULR5 123 aaKnown RBP9.7□□□□□ -0.86
USE1-209ENST00000601592 LSM4Q9Y4Z0 139 aaKnown RBP9.7□□□□□ -0.86
USE1-209ENST00000601592 SMAD5-AS1Q9Y6J3 95 aa9.7□□□□□ -0.86
USE1-209ENST00000601592 SCGB2A1O75556 95 aa9.69□□□□□ -0.86
USE1-209ENST00000601592 MED6O75586 246 aa9.69□□□□□ -0.86
USE1-209ENST00000601592 UPK1BO75841 260 aa9.69□□□□□ -0.86
USE1-209ENST00000601592 SLC25A6P12236 298 aa9.69□□□□□ -0.86
USE1-209ENST00000601592 FCGR2BP31994 310 aaPredicted RBP9.69□□□□□ -0.86
USE1-209ENST00000601592 ELLP55199 621 aaPredicted RBP9.69□□□□□ -0.86
USE1-209ENST00000601592 MLANAQ16655 118 aa9.69□□□□□ -0.86
USE1-209ENST00000601592 DEFB114Q30KQ6 69 aa9.69□□□□□ -0.86
USE1-209ENST00000601592 C2orf83Q53S99 150 aa9.69□□□□□ -0.86
USE1-209ENST00000601592 PVRIGQ6DKI7 326 aa9.69□□□□□ -0.86
USE1-209ENST00000601592 OR2K2Q8NGT1 345 aa9.69□□□□□ -0.86
USE1-209ENST00000601592 RNASEH2CQ8TDP1 164 aaKnown RBP9.69□□□□□ -0.86
USE1-209ENST00000601592 MARC2Q969Z3 335 aa9.69□□□□□ -0.86
USE1-209ENST00000601592 MAGT1Q9H0U3 335 aa9.69□□□□□ -0.86
USE1-209ENST00000601592 DAZ1Q9NQZ3 744 aaKnown RBP9.69□□□□□ -0.86
USE1-209ENST00000601592 MLXQ9UH92 298 aa9.69□□□□□ -0.86
USE1-209ENST00000601592 TBC1D24Q9ULP9 559 aa9.69□□□□□ -0.86
USE1-209ENST00000601592 FAM90A26D6RGX4 464 aa9.68□□□□□ -0.86
USE1-209ENST00000601592 PITX3O75364 302 aa9.68□□□□□ -0.86
USE1-209ENST00000601592 SCAF4O95104 1147 aaKnown RBP9.68□□□□□ -0.86
USE1-209ENST00000601592 IFNA4P05014 189 aa9.68□□□□□ -0.86
USE1-209ENST00000601592 H2AFB2P0C5Z0 115 aa9.68□□□□□ -0.86
USE1-209ENST00000601592 RND2P52198 227 aa9.68□□□□□ -0.86
USE1-209ENST00000601592 ENKURQ8TC29 256 aa9.68□□□□□ -0.86
USE1-209ENST00000601592 WDR89Q96FK6 387 aaPredicted RBP9.68□□□□□ -0.86
USE1-209ENST00000601592 B9D2Q9BPU9 175 aa9.68□□□□□ -0.86
USE1-209ENST00000601592 MRPL36Q9P0J6 103 aaKnown RBP9.68□□□□□ -0.86
USE1-209ENST00000601592 MRPL27Q9P0M9 148 aaKnown RBP9.68□□□□□ -0.86
USE1-209ENST00000601592 U3KQ87 197 aa9.68□□□□□ -0.86
USE1-209ENST00000601592 IGHV3-49A0A0A0MS15 119 aa9.67□□□□□ -0.86
USE1-209ENST00000601592 MPTX1A8MV57 137 aa9.67□□□□□ -0.86
USE1-209ENST00000601592 WRBO00258 174 aa9.67□□□□□ -0.86
USE1-209ENST00000601592 CLN5O75503 358 aa9.67□□□□□ -0.86
USE1-209ENST00000601592 TMEM50AO95807 157 aa9.67□□□□□ -0.86
USE1-209ENST00000601592 SCGB1D2O95969 90 aa9.67□□□□□ -0.86
USE1-209ENST00000601592 CD81P60033 236 aa9.67□□□□□ -0.86
USE1-209ENST00000601592 ASAH1Q13510 395 aa9.67□□□□□ -0.86
USE1-209ENST00000601592 ETFRF1Q6IPR1 90 aa9.67□□□□□ -0.86
USE1-209ENST00000601592 ZNF600Q6ZNG1 722 aa9.67□□□□□ -0.86
USE1-209ENST00000601592 RBPMS2Q6ZRY4 209 aaKnown RBP9.67□□□□□ -0.86
USE1-209ENST00000601592 TMEM61Q8N0U2 210 aa9.67□□□□□ -0.86
USE1-209ENST00000601592 OR4X1Q8NH49 305 aa9.67□□□□□ -0.86
USE1-209ENST00000601592 TMEM170AQ8WVE7 144 aa9.67□□□□□ -0.86
USE1-209ENST00000601592 ACY3Q96HD9 319 aa9.67□□□□□ -0.86
USE1-209ENST00000601592 ASCL2Q99929 193 aa9.67□□□□□ -0.86
USE1-209ENST00000601592 SEC22CQ9BRL7 303 aa9.67□□□□□ -0.86
USE1-209ENST00000601592 PUS1Q9Y606 427 aaKnown RBP eCLIP9.67□□□□□ -0.86
USE1-209ENST00000601592 C15orf62A8K5M9 175 aa9.66□□□□□ -0.86
USE1-209ENST00000601592 SYNGR2O43760 224 aa9.66□□□□□ -0.86
USE1-209ENST00000601592 SLC25A4P12235 298 aa9.66□□□□□ -0.86
USE1-209ENST00000601592 RAB11AP62491 216 aa9.66□□□□□ -0.86
USE1-209ENST00000601592 TIGITQ495A1 244 aa9.66□□□□□ -0.86
USE1-209ENST00000601592 PRSS54Q6PEW0 395 aa9.66□□□□□ -0.86
USE1-209ENST00000601592 SLC16A13Q7RTY0 426 aa9.66□□□□□ -0.86
USE1-209ENST00000601592 MITD1Q8WV92 249 aa9.66□□□□□ -0.86
USE1-209ENST00000601592 CIB3Q96Q77 187 aaPredicted RBP9.66□□□□□ -0.86
USE1-209ENST00000601592 GINS3Q9BRX5 216 aa9.66□□□□□ -0.86
USE1-209ENST00000601592 IGHV3OR16-13A0A075B7E8 117 aa9.65□□□□□ -0.86
USE1-209ENST00000601592 IGHV3-74A0A0B4J1X5 117 aa9.65□□□□□ -0.86
USE1-209ENST00000601592 FAM25EA8MYX2 175 aa9.65□□□□□ -0.86
USE1-209ENST00000601592 H3BP45 60 aa9.65□□□□□ -0.86
USE1-209ENST00000601592 K7EMT4 169 aa9.65□□□□□ -0.86
USE1-209ENST00000601592 CCSO14618 274 aa9.65□□□□□ -0.86
USE1-209ENST00000601592 FRMD6-AS1P0C7T7 363 aa9.65□□□□□ -0.86
USE1-209ENST00000601592 C8orf88P0DMB2 117 aa9.65□□□□□ -0.86
USE1-209ENST00000601592 IGHV4-30-4P0DP06 118 aa9.65□□□□□ -0.86
USE1-209ENST00000601592 OR10J1P30954 320 aa9.65□□□□□ -0.86
USE1-209ENST00000601592 NKX2-1P43699 371 aaPredicted RBP9.65□□□□□ -0.86
USE1-209ENST00000601592 IAH1Q2TAA2 248 aaPredicted RBP9.65□□□□□ -0.86
USE1-209ENST00000601592 SPANXN5Q5MJ07 72 aa9.65□□□□□ -0.86
USE1-209ENST00000601592 TOMM20LQ6UXN7 152 aa9.65□□□□□ -0.86
USE1-209ENST00000601592 Q8N1Y9 231 aa9.65□□□□□ -0.86
USE1-209ENST00000601592 TMEM116Q8NCL8 245 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms