RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 TMEM97Q5BJF2 176 aa9.12□□□□□ -0.95
ZNF558-207ENST00000601372 C8orf46Q8TAG6 207 aa9.12□□□□□ -0.95
ZNF558-207ENST00000601372 CACNA1HO95180 2353 aa9.12□□□□□ -0.95
ZNF558-207ENST00000601372 M0QZK8 103 aa9.11□□□□□ -0.95
ZNF558-207ENST00000601372 TMEM42Q69YG0 159 aa9.11□□□□□ -0.95
ZNF558-207ENST00000601372 DMRTC2Q8IXT2 367 aaPredicted RBP9.11□□□□□ -0.95
ZNF558-207ENST00000601372 A0A0G2JLM5 398 aa9.11□□□□□ -0.95
ZNF558-207ENST00000601372 NMSQ5H8A3 153 aa9.11□□□□□ -0.95
ZNF558-207ENST00000601372 YTHDF2Q9Y5A9 579 aaKnown RBP9.11□□□□□ -0.95
ZNF558-207ENST00000601372 ZNF207O43670 478 aaKnown RBP9.11□□□□□ -0.95
ZNF558-207ENST00000601372 SOD3P08294 240 aa9.11□□□□□ -0.95
ZNF558-207ENST00000601372 C1orf147Q96MC9 270 aaPredicted RBP9.11□□□□□ -0.95
ZNF558-207ENST00000601372 IGHV2-26A0A0B4J1V2 119 aa9.11□□□□□ -0.95
ZNF558-207ENST00000601372 TRAV3A0A0B4J244 114 aa9.11□□□□□ -0.95
ZNF558-207ENST00000601372 TMEM250H0YL14 139 aa9.11□□□□□ -0.95
ZNF558-207ENST00000601372 PRSS1P07477 247 aa9.11□□□□□ -0.95
ZNF558-207ENST00000601372 MYOD1P15172 320 aa9.11□□□□□ -0.95
ZNF558-207ENST00000601372 GNG5P63218 68 aa9.11□□□□□ -0.95
ZNF558-207ENST00000601372 WNT10AQ9GZT5 417 aa9.11□□□□□ -0.95
ZNF558-207ENST00000601372 TMEM191AQ9H0A3 160 aa9.11□□□□□ -0.95
ZNF558-207ENST00000601372 FBXL7Q9UJT9 491 aa9.11□□□□□ -0.95
ZNF558-207ENST00000601372 C5orf52A6NGY3 159 aa9.11□□□□□ -0.95
ZNF558-207ENST00000601372 NTF4P34130 210 aa9.11□□□□□ -0.95
ZNF558-207ENST00000601372 ADORA2A-AS1P86434 159 aa9.11□□□□□ -0.95
ZNF558-207ENST00000601372 IL36BQ9NZH7 164 aa9.11□□□□□ -0.95
ZNF558-207ENST00000601372 YLPM1P49750 1951 aaKnown RBP9.11□□□□□ -0.95
ZNF558-207ENST00000601372 NBR2O15453 112 aa9.11□□□□□ -0.95
ZNF558-207ENST00000601372 SPATA31B1PQ5VZV4 182 aa9.11□□□□□ -0.95
ZNF558-207ENST00000601372 OR4B1Q8NGF8 309 aa9.11□□□□□ -0.95
ZNF558-207ENST00000601372 INTS1Q8N201 2190 aaKnown RBP9.11□□□□□ -0.95
ZNF558-207ENST00000601372 TIMM23O14925 209 aa9.1□□□□□ -0.95
ZNF558-207ENST00000601372 NPFFO15130 113 aa9.1□□□□□ -0.95
ZNF558-207ENST00000601372 C21orf62-AS1Q17RA5 79 aa9.1□□□□□ -0.95
ZNF558-207ENST00000601372 RRN3P1Q2M238 152 aa9.1□□□□□ -0.95
ZNF558-207ENST00000601372 Q6P435 159 aa9.1□□□□□ -0.95
ZNF558-207ENST00000601372 CLEC19AQ6UXS0 136 aa9.1□□□□□ -0.95
ZNF558-207ENST00000601372 CD177Q8N6Q3 437 aa9.1□□□□□ -0.95
ZNF558-207ENST00000601372 LINC00527Q9UJ94 153 aa9.1□□□□□ -0.95
ZNF558-207ENST00000601372 ZNF503-AS2A6NEH8 195 aa9.1□□□□□ -0.95
ZNF558-207ENST00000601372 SAA1P0DJI8 122 aaPredicted RBP9.1□□□□□ -0.95
ZNF558-207ENST00000601372 FOXL2NBQ6ZUU3 175 aa9.1□□□□□ -0.95
ZNF558-207ENST00000601372 IFI27L2Q9H2X8 130 aa9.1□□□□□ -0.95
ZNF558-207ENST00000601372 HSPB8Q9UJY1 196 aa9.1□□□□□ -0.95
ZNF558-207ENST00000601372 KLF2Q9Y5W3 355 aaPredicted RBP9.1□□□□□ -0.95
ZNF558-207ENST00000601372 GGCTO75223 188 aaKnown RBP9.1□□□□□ -0.95
ZNF558-207ENST00000601372 NAPSAO96009 420 aa9.1□□□□□ -0.95
ZNF558-207ENST00000601372 MGPP08493 103 aa9.1□□□□□ -0.95
ZNF558-207ENST00000601372 COX19Q49B96 90 aa9.1□□□□□ -0.95
ZNF558-207ENST00000601372 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.1□□□□□ -0.95
ZNF558-207ENST00000601372 OR10J6PQ8NGY7 276 aa9.1□□□□□ -0.95
ZNF558-207ENST00000601372 CBY1Q9Y3M2 126 aa9.1□□□□□ -0.95
ZNF558-207ENST00000601372 TMEM189A5PLL7 270 aa9.1□□□□□ -0.95
ZNF558-207ENST00000601372 SRRM5B3KS81 715 aa9.1□□□□□ -0.95
ZNF558-207ENST00000601372 H3BUX3 64 aa9.1□□□□□ -0.95
ZNF558-207ENST00000601372 VENTXO95231 258 aa9.1□□□□□ -0.95
ZNF558-207ENST00000601372 RUSC1-AS1Q66K80 236 aa9.1□□□□□ -0.95
ZNF558-207ENST00000601372 IGHV3-49A0A0A0MS15 119 aa9.1□□□□□ -0.95
ZNF558-207ENST00000601372 TRAV30A0A087WSZ9 112 aa9.09□□□□□ -0.95
ZNF558-207ENST00000601372 DEFB113Q30KQ7 82 aa9.09□□□□□ -0.95
ZNF558-207ENST00000601372 LEMD1Q68G75 181 aa9.09□□□□□ -0.95
ZNF558-207ENST00000601372 GOLT1AQ6ZVE7 132 aa9.09□□□□□ -0.95
ZNF558-207ENST00000601372 OR10W1Q8NGF6 305 aa9.09□□□□□ -0.95
ZNF558-207ENST00000601372 DERL1Q9BUN8 251 aa9.09□□□□□ -0.95
ZNF558-207ENST00000601372 MUC21A0A0G2JKD1 596 aa9.09□□□□□ -0.95
ZNF558-207ENST00000601372 MUC21A0A140T8X8 626 aa9.09□□□□□ -0.95
ZNF558-207ENST00000601372 RELBQ01201 579 aa9.09□□□□□ -0.95
ZNF558-207ENST00000601372 MUC21Q5SSG8 566 aa9.09□□□□□ -0.95
ZNF558-207ENST00000601372 NRGNQ92686 78 aa9.09□□□□□ -0.95
ZNF558-207ENST00000601372 BEX4Q9NWD9 120 aaPredicted RBP9.09□□□□□ -0.95
ZNF558-207ENST00000601372 IGHV3OR16-13A0A075B7E8 117 aa9.09□□□□□ -0.95
ZNF558-207ENST00000601372 IGHV3-74A0A0B4J1X5 117 aa9.09□□□□□ -0.95
ZNF558-207ENST00000601372 FOLR2P14207 255 aa9.09□□□□□ -0.95
ZNF558-207ENST00000601372 FAM53AQ6NSI3 398 aaPredicted RBP9.09□□□□□ -0.95
ZNF558-207ENST00000601372 Q6ZRM9 215 aa9.09□□□□□ -0.95
ZNF558-207ENST00000601372 REC114Q7Z4M0 266 aa9.09□□□□□ -0.95
ZNF558-207ENST00000601372 SRSF12Q8WXF0 261 aaKnown RBP9.09□□□□□ -0.95
ZNF558-207ENST00000601372 DKK4Q9UBT3 224 aa9.09□□□□□ -0.95
ZNF558-207ENST00000601372 DUTP33316 252 aaKnown RBP9.09□□□□□ -0.95
ZNF558-207ENST00000601372 C3orf36Q3SXR2 165 aa9.09□□□□□ -0.95
ZNF558-207ENST00000601372 ZNF843Q8N446 348 aa9.09□□□□□ -0.95
ZNF558-207ENST00000601372 GAFA1Q96PS6 74 aa9.09□□□□□ -0.95
ZNF558-207ENST00000601372 TXNDC17Q9BRA2 123 aa9.09□□□□□ -0.95
ZNF558-207ENST00000601372 HSPB7Q9UBY9 170 aa9.09□□□□□ -0.95
ZNF558-207ENST00000601372 RPUSD1Q9UJJ7 312 aaKnown RBP9.09□□□□□ -0.95
ZNF558-207ENST00000601372 IGKV1-6A0A0C4DH72 117 aa9.09□□□□□ -0.95
ZNF558-207ENST00000601372 OR4C46A6NHA9 309 aa9.09□□□□□ -0.95
ZNF558-207ENST00000601372 IGKV3-20P01619 116 aa9.09□□□□□ -0.95
ZNF558-207ENST00000601372 NPPCP23582 126 aa9.09□□□□□ -0.95
ZNF558-207ENST00000601372 FAM19A2Q8N3H0 131 aa9.09□□□□□ -0.95
ZNF558-207ENST00000601372 SPRY4Q9C004 299 aa9.09□□□□□ -0.95
ZNF558-207ENST00000601372 COMPP49747 757 aaPredicted RBP9.09□□□□□ -0.95
ZNF558-207ENST00000601372 SRSF7Q16629 238 aaKnown RBP eCLIP9.09□□□□□ -0.95
ZNF558-207ENST00000601372 C15orf61A6NNL5 157 aa9.08□□□□□ -0.96
ZNF558-207ENST00000601372 IGHV1-8P0DP01 117 aa9.08□□□□□ -0.96
ZNF558-207ENST00000601372 CD99P14209 185 aa9.08□□□□□ -0.96
ZNF558-207ENST00000601372 CDC42EP3Q9UKI2 254 aa9.08□□□□□ -0.96
ZNF558-207ENST00000601372 LINC00473A8K010 186 aa9.08□□□□□ -0.96
ZNF558-207ENST00000601372 HLA-DQA1P01909 254 aa9.08□□□□□ -0.96
ZNF558-207ENST00000601372 GPR183P32249 361 aa9.08□□□□□ -0.96
ZNF558-207ENST00000601372 RSPO1Q2MKA7 263 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms