RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 TRPT1Q86TN4 253 aaKnown RBP13.08□□□□□ -0.32
CHMP2A-208ENST00000601220 SLC35G3Q8N808 338 aa13.08□□□□□ -0.32
CHMP2A-208ENST00000601220 OR4X1Q8NH49 305 aa13.08□□□□□ -0.32
CHMP2A-208ENST00000601220 VCX3AQ9NNX9 186 aa13.08□□□□□ -0.32
CHMP2A-208ENST00000601220 IFNA17P01571 189 aa13.07□□□□□ -0.32
CHMP2A-208ENST00000601220 IGKV1-17P01599 117 aa13.07□□□□□ -0.32
CHMP2A-208ENST00000601220 RBMY1A1P0DJD3 496 aaKnown RBP13.07□□□□□ -0.32
CHMP2A-208ENST00000601220 RBMY1CP0DJD4 496 aa13.07□□□□□ -0.32
CHMP2A-208ENST00000601220 NPPCP23582 126 aa13.07□□□□□ -0.32
CHMP2A-208ENST00000601220 PPP5CP53041 499 aa13.07□□□□□ -0.32
CHMP2A-208ENST00000601220 RBMY1FQ15415 496 aaKnown RBP13.07□□□□□ -0.32
CHMP2A-208ENST00000601220 SP6Q3SY56 376 aa13.07□□□□□ -0.32
CHMP2A-208ENST00000601220 AARDQ4LEZ3 155 aa13.07□□□□□ -0.32
CHMP2A-208ENST00000601220 ARRDC1Q8N5I2 433 aa13.07□□□□□ -0.32
CHMP2A-208ENST00000601220 OR4D10Q8NGI6 311 aa13.07□□□□□ -0.32
CHMP2A-208ENST00000601220 OR52I2Q8NH67 350 aa13.07□□□□□ -0.32
CHMP2A-208ENST00000601220 C2CD4CQ8TF44 421 aa13.07□□□□□ -0.32
CHMP2A-208ENST00000601220 HRH4Q9H3N8 390 aa13.07□□□□□ -0.32
CHMP2A-208ENST00000601220 MTFP1Q9UDX5 166 aa13.07□□□□□ -0.32
CHMP2A-208ENST00000601220 APLNQ9ULZ1 77 aa13.07□□□□□ -0.32
CHMP2A-208ENST00000601220 CORTO00230 105 aa13.06□□□□□ -0.32
CHMP2A-208ENST00000601220 TNFAIP8O95379 198 aa13.06□□□□□ -0.32
CHMP2A-208ENST00000601220 UCP1P25874 307 aa13.06□□□□□ -0.32
CHMP2A-208ENST00000601220 AKR1C2P52895 323 aa13.06□□□□□ -0.32
CHMP2A-208ENST00000601220 SUB1P53999 127 aaKnown RBP eCLIP13.06□□□□□ -0.32
CHMP2A-208ENST00000601220 TCTAP57738 103 aa13.06□□□□□ -0.32
CHMP2A-208ENST00000601220 RPL11P62913 178 aaKnown RBP13.06□□□□□ -0.32
CHMP2A-208ENST00000601220 RNASE12Q5GAN4 147 aaKnown RBP13.06□□□□□ -0.32
CHMP2A-208ENST00000601220 RNASE10Q5GAN6 216 aaKnown RBP13.06□□□□□ -0.32
CHMP2A-208ENST00000601220 DCANP1Q8TF63 244 aa13.06□□□□□ -0.32
CHMP2A-208ENST00000601220 GRAMD2BQ96HH9 432 aa13.06□□□□□ -0.32
CHMP2A-208ENST00000601220 ABHD1Q96SE0 405 aa13.06□□□□□ -0.32
CHMP2A-208ENST00000601220 TMEM231Q9H6L2 316 aa13.06□□□□□ -0.32
CHMP2A-208ENST00000601220 RABAC1Q9UI14 185 aa13.06□□□□□ -0.32
CHMP2A-208ENST00000601220 U3KQE9 123 aa13.06□□□□□ -0.32
CHMP2A-208ENST00000601220 A0A1W2PS18 150 aa13.05□□□□□ -0.32
CHMP2A-208ENST00000601220 CD74P04233 296 aa13.05□□□□□ -0.32
CHMP2A-208ENST00000601220 TBPP20226 339 aa13.05□□□□□ -0.32
CHMP2A-208ENST00000601220 RORCP51449 518 aa13.05□□□□□ -0.32
CHMP2A-208ENST00000601220 STHQ8IWL8 128 aa13.05□□□□□ -0.32
CHMP2A-208ENST00000601220 TERB2Q8NHR7 220 aa13.05□□□□□ -0.32
CHMP2A-208ENST00000601220 IGHV4-28A0A0C4DH34 117 aa13.04□□□□□ -0.32
CHMP2A-208ENST00000601220 KNCNA6PVL3 124 aa13.04□□□□□ -0.32
CHMP2A-208ENST00000601220 ZNF705EA8MWA4 302 aaPredicted RBP13.04□□□□□ -0.32
CHMP2A-208ENST00000601220 ATG12O94817 140 aa13.04□□□□□ -0.32
CHMP2A-208ENST00000601220 C4BPBP20851 252 aa13.04□□□□□ -0.32
CHMP2A-208ENST00000601220 P2RY1P47900 373 aa13.04□□□□□ -0.32
CHMP2A-208ENST00000601220 HOXA1P49639 335 aaPredicted RBP13.04□□□□□ -0.32
CHMP2A-208ENST00000601220 TIGITQ495A1 244 aa13.04□□□□□ -0.32
CHMP2A-208ENST00000601220 CSNK1G2-AS1Q8NCQ2 148 aa13.04□□□□□ -0.32
CHMP2A-208ENST00000601220 OR13C8Q8NGS7 320 aa13.04□□□□□ -0.32
CHMP2A-208ENST00000601220 METTL26Q96S19 204 aa13.04□□□□□ -0.32
CHMP2A-208ENST00000601220 NAA50Q9GZZ1 169 aaKnown RBP13.04□□□□□ -0.32
CHMP2A-208ENST00000601220 X6R8D5 127 aa13.04□□□□□ -0.32
CHMP2A-208ENST00000601220 FAM25AB3EWG3 89 aa13.03□□□□□ -0.32
CHMP2A-208ENST00000601220 FAM25CB3EWG5 89 aa13.03□□□□□ -0.32
CHMP2A-208ENST00000601220 FAM25GB3EWG6 89 aa13.03□□□□□ -0.32
CHMP2A-208ENST00000601220 CDS2O95674 445 aa13.03□□□□□ -0.32
CHMP2A-208ENST00000601220 OPRK1P41145 380 aa13.03□□□□□ -0.32
CHMP2A-208ENST00000601220 CTF1Q16619 201 aa13.03□□□□□ -0.32
CHMP2A-208ENST00000601220 TRIM16LQ309B1 348 aa13.03□□□□□ -0.32
CHMP2A-208ENST00000601220 MORN3Q6PF18 240 aaPredicted RBP13.03□□□□□ -0.32
CHMP2A-208ENST00000601220 STXBP6Q8NFX7 210 aa13.03□□□□□ -0.32
CHMP2A-208ENST00000601220 OR52E5Q8NH55 327 aa13.03□□□□□ -0.32
CHMP2A-208ENST00000601220 LHFPL5Q8TAF8 219 aa13.03□□□□□ -0.32
CHMP2A-208ENST00000601220 ZFAND1Q8TCF1 268 aa13.03□□□□□ -0.32
CHMP2A-208ENST00000601220 PDCD10Q9BUL8 212 aa13.03□□□□□ -0.32
CHMP2A-208ENST00000601220 COPZ2Q9P299 210 aa13.03□□□□□ -0.32
CHMP2A-208ENST00000601220 FAT2Q9NYQ8 4349 aa13.02□□□□□ -0.32
CHMP2A-208ENST00000601220 ELOA3CA0A087WX78 387 aaPredicted RBP13.02□□□□□ -0.33
CHMP2A-208ENST00000601220 IGLL5B9A064 214 aa13.02□□□□□ -0.33
CHMP2A-208ENST00000601220 C11orf94C9JXX5 98 aa13.02□□□□□ -0.33
CHMP2A-208ENST00000601220 ZNF688P0C7X2 276 aa13.02□□□□□ -0.33
CHMP2A-208ENST00000601220 IGLC1P0CG04 106 aa13.02□□□□□ -0.33
CHMP2A-208ENST00000601220 SPP1P10451 314 aa13.02□□□□□ -0.33
CHMP2A-208ENST00000601220 SPCS3P61009 180 aa13.02□□□□□ -0.33
CHMP2A-208ENST00000601220 TMEM41BQ5BJD5 291 aa13.02□□□□□ -0.33
CHMP2A-208ENST00000601220 MZT2AQ6P582 158 aa13.02□□□□□ -0.33
CHMP2A-208ENST00000601220 PRSS54Q6PEW0 395 aa13.02□□□□□ -0.33
CHMP2A-208ENST00000601220 TMEM229BQ8NBD8 167 aa13.02□□□□□ -0.33
CHMP2A-208ENST00000601220 MARCH1Q8TCQ1 289 aa13.02□□□□□ -0.33
CHMP2A-208ENST00000601220 GLYATL2Q8WU03 294 aa13.02□□□□□ -0.33
CHMP2A-208ENST00000601220 TMEM170AQ8WVE7 144 aa13.02□□□□□ -0.33
CHMP2A-208ENST00000601220 TMEM230Q96A57 120 aa13.02□□□□□ -0.33
CHMP2A-208ENST00000601220 RRNAD1Q96FB5 475 aaKnown RBP13.02□□□□□ -0.33
CHMP2A-208ENST00000601220 RTBDNQ9BSG5 229 aaPredicted RBP13.02□□□□□ -0.33
CHMP2A-208ENST00000601220 TMEM222Q9H0R3 208 aa13.02□□□□□ -0.33
CHMP2A-208ENST00000601220 EXTL2Q9UBQ6 330 aa13.02□□□□□ -0.33
CHMP2A-208ENST00000601220 DNAH2Q9P225 4427 aa13.01□□□□□ -0.33
CHMP2A-208ENST00000601220 TRAV30A0A087WSZ9 112 aa13.01□□□□□ -0.33
CHMP2A-208ENST00000601220 B3GALNT1O75752 331 aa13.01□□□□□ -0.33
CHMP2A-208ENST00000601220 MIFP14174 115 aa13.01□□□□□ -0.33
CHMP2A-208ENST00000601220 ZNF182P17025 639 aaPredicted RBP13.01□□□□□ -0.33
CHMP2A-208ENST00000601220 HLA-DMBP28068 263 aa13.01□□□□□ -0.33
CHMP2A-208ENST00000601220 C16orf54Q6UWD8 224 aa13.01□□□□□ -0.33
CHMP2A-208ENST00000601220 CCDC71LQ8N9Z2 235 aa13.01□□□□□ -0.33
CHMP2A-208ENST00000601220 GLMPQ8WWB7 406 aa13.01□□□□□ -0.33
CHMP2A-208ENST00000601220 ENY2Q9NPA8 101 aa13.01□□□□□ -0.33
CHMP2A-208ENST00000601220 DNAH17Q9UFH2 4485 aa13.01□□□□□ -0.33
CHMP2A-208ENST00000601220 GABARAPO95166 117 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms