RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	LGI3	Q8N145	548 aa		11.58	□□□□□ -0.56
PLD3-223	ENST00000600948	SPATA25	Q9BR10	227 aa		11.58	□□□□□ -0.56
PLD3-223	ENST00000600948	MRPL36	Q9P0J6	103 aa	Known RBP	11.58	□□□□□ -0.56
PLD3-223	ENST00000600948	SHPK	Q9UHJ6	478 aa		11.58	□□□□□ -0.56
PLD3-223	ENST00000600948	SMPX	Q9UHP9	88 aa		11.58	□□□□□ -0.56
PLD3-223	ENST00000600948	IGHV7-4-1	A0A0J9YVY3	117 aa		11.57	□□□□□ -0.56
PLD3-223	ENST00000600948	TSPAN4	O14817	238 aa		11.57	□□□□□ -0.56
PLD3-223	ENST00000600948	YIF1A	O95070	293 aa		11.57	□□□□□ -0.56
PLD3-223	ENST00000600948	NXPH3	O95157	252 aa		11.57	□□□□□ -0.56
PLD3-223	ENST00000600948	TMEM50A	O95807	157 aa		11.57	□□□□□ -0.56
PLD3-223	ENST00000600948	ANXA3	P12429	323 aa		11.57	□□□□□ -0.56
PLD3-223	ENST00000600948	HTR2B	P41595	481 aa		11.57	□□□□□ -0.56
PLD3-223	ENST00000600948	SRPX	P78539	464 aa		11.57	□□□□□ -0.56
PLD3-223	ENST00000600948	MLANA	Q16655	118 aa		11.57	□□□□□ -0.56
PLD3-223	ENST00000600948	TMED4	Q7Z7H5	227 aa		11.57	□□□□□ -0.56
PLD3-223	ENST00000600948	SPAG8	Q99932	426 aa	Predicted RBP	11.57	□□□□□ -0.56
PLD3-223	ENST00000600948	SLC25A21	Q9BQT8	299 aa	Predicted RBP	11.57	□□□□□ -0.56
PLD3-223	ENST00000600948	HEYL	Q9NQ87	328 aa	Predicted RBP	11.57	□□□□□ -0.56
PLD3-223	ENST00000600948	CEBPZOS	A8MTT3	80 aa		11.56	□□□□□ -0.56
PLD3-223	ENST00000600948	CHEK1	O14757	476 aa		11.56	□□□□□ -0.56
PLD3-223	ENST00000600948	OPRK1	P41145	380 aa		11.56	□□□□□ -0.56
PLD3-223	ENST00000600948	CCR6	P51684	374 aa		11.56	□□□□□ -0.56
PLD3-223	ENST00000600948	SMCO1	Q147U7	214 aa		11.56	□□□□□ -0.56
PLD3-223	ENST00000600948	BAK1	Q16611	211 aa		11.56	□□□□□ -0.56
PLD3-223	ENST00000600948	C2orf83	Q53S99	150 aa		11.56	□□□□□ -0.56
PLD3-223	ENST00000600948	TMEM128	Q5BJH2	165 aa		11.56	□□□□□ -0.56
PLD3-223	ENST00000600948	LAMTOR1	Q6IAA8	161 aa		11.56	□□□□□ -0.56
PLD3-223	ENST00000600948	TOMM20L	Q6UXN7	152 aa		11.56	□□□□□ -0.56
PLD3-223	ENST00000600948	ZNF600	Q6ZNG1	722 aa		11.56	□□□□□ -0.56
PLD3-223	ENST00000600948	OR4X1	Q8NH49	305 aa		11.56	□□□□□ -0.56
PLD3-223	ENST00000600948	TMEM170A	Q8WVE7	144 aa		11.56	□□□□□ -0.56
PLD3-223	ENST00000600948	CITED4	Q96RK1	184 aa		11.56	□□□□□ -0.56
PLD3-223	ENST00000600948	ZFAND3	Q9H8U3	227 aa		11.56	□□□□□ -0.56
PLD3-223	ENST00000600948	CACFD1	Q9UGQ2	172 aa		11.56	□□□□□ -0.56
PLD3-223	ENST00000600948	IGHV3-49	A0A0A0MS15	119 aa		11.55	□□□□□ -0.56
PLD3-223	ENST00000600948	CLN5	O75503	358 aa		11.55	□□□□□ -0.56
PLD3-223	ENST00000600948	TNFRSF9	Q07011	255 aa		11.55	□□□□□ -0.56
PLD3-223	ENST00000600948	TMEM116	Q8NCL8	245 aa		11.55	□□□□□ -0.56
PLD3-223	ENST00000600948	SLC24A4	Q8NFF2	622 aa		11.55	□□□□□ -0.56
PLD3-223	ENST00000600948	RNF2	Q99496	336 aa		11.55	□□□□□ -0.56
PLD3-223	ENST00000600948	SDHC	Q99643	169 aa	Predicted RBP	11.55	□□□□□ -0.56
PLD3-223	ENST00000600948	RHPN1-AS1	Q9BWJ2	59 aa		11.55	□□□□□ -0.56
PLD3-223	ENST00000600948	HIPK2	Q9H2X6	1198 aa		11.55	□□□□□ -0.56
PLD3-223	ENST00000600948	HSPB7	Q9UBY9	170 aa		11.55	□□□□□ -0.56
PLD3-223	ENST00000600948	PUS1	Q9Y606	427 aa	Known RBP eCLIP	11.55	□□□□□ -0.56
PLD3-223	ENST00000600948	TRAV14DV4	A0A0A6YYC5	116 aa		11.54	□□□□□ -0.56
PLD3-223	ENST00000600948		A0A1B0GU03	582 aa		11.54	□□□□□ -0.56
PLD3-223	ENST00000600948	DUXB	A0A1W2PPF3	345 aa		11.54	□□□□□ -0.56
PLD3-223	ENST00000600948	NPY1R	P25929	384 aa		11.54	□□□□□ -0.56
PLD3-223	ENST00000600948	LRTM2	Q8N967	370 aa		11.54	□□□□□ -0.56
PLD3-223	ENST00000600948	RNASEH2C	Q8TDP1	164 aa	Known RBP	11.54	□□□□□ -0.56
PLD3-223	ENST00000600948	GINS3	Q9BRX5	216 aa		11.54	□□□□□ -0.56
PLD3-223	ENST00000600948	RETN	Q9HD89	108 aa		11.54	□□□□□ -0.56
PLD3-223	ENST00000600948	NDUFA13	Q9P0J0	144 aa		11.54	□□□□□ -0.56
PLD3-223	ENST00000600948	IGHV3OR16-13	A0A075B7E8	117 aa		11.53	□□□□□ -0.56
PLD3-223	ENST00000600948	IGHV3-74	A0A0B4J1X5	117 aa		11.53	□□□□□ -0.56
PLD3-223	ENST00000600948	PIGBOS1	A0A0B4J2F0	54 aa		11.53	□□□□□ -0.56
PLD3-223	ENST00000600948	RPS10-NUDT3	A0A1W2PQS6	291 aa		11.53	□□□□□ -0.56
PLD3-223	ENST00000600948	C3orf84	H3BNL1	204 aa		11.53	□□□□□ -0.56
PLD3-223	ENST00000600948	SFT2D2	O95562	160 aa		11.53	□□□□□ -0.56
PLD3-223	ENST00000600948	IGKV1-17	P01599	117 aa		11.53	□□□□□ -0.56
PLD3-223	ENST00000600948	VAMP1	P23763	118 aa		11.53	□□□□□ -0.56
PLD3-223	ENST00000600948	PPP1R1A	Q13522	171 aa		11.53	□□□□□ -0.56
PLD3-223	ENST00000600948	RBMS2	Q15434	407 aa	Known RBP	11.53	□□□□□ -0.56
PLD3-223	ENST00000600948	ODF3L2	Q3SX64	289 aa		11.53	□□□□□ -0.56
PLD3-223	ENST00000600948	TRIQK	Q629K1	86 aa		11.53	□□□□□ -0.56
PLD3-223	ENST00000600948	CENPS	Q8N2Z9	138 aa		11.53	□□□□□ -0.56
PLD3-223	ENST00000600948	MUC7	Q8TAX7	377 aa		11.53	□□□□□ -0.56
PLD3-223	ENST00000600948	RBKS	Q9H477	322 aa		11.53	□□□□□ -0.56
PLD3-223	ENST00000600948	EDA2R	Q9HAV5	297 aa		11.53	□□□□□ -0.56
PLD3-223	ENST00000600948	DNAH7	Q8WXX0	4024 aa		11.52	□□□□□ -0.56
PLD3-223	ENST00000600948	NAP1L6	A6NFF2	107 aa		11.52	□□□□□ -0.57
PLD3-223	ENST00000600948	OR4C46	A6NHA9	309 aa		11.52	□□□□□ -0.57
PLD3-223	ENST00000600948	PITX3	O75364	302 aa		11.52	□□□□□ -0.57
PLD3-223	ENST00000600948	APOH	P02749	345 aa	Predicted RBP	11.52	□□□□□ -0.57
PLD3-223	ENST00000600948	SLC25A4	P12235	298 aa		11.52	□□□□□ -0.57
PLD3-223	ENST00000600948	INPP1	P49441	399 aa		11.52	□□□□□ -0.57
PLD3-223	ENST00000600948	FAM90A2P	Q658T7	463 aa		11.52	□□□□□ -0.57
PLD3-223	ENST00000600948	PRSS54	Q6PEW0	395 aa		11.52	□□□□□ -0.57
PLD3-223	ENST00000600948	OR1S1	Q8NH92	325 aa		11.52	□□□□□ -0.57
PLD3-223	ENST00000600948	DTD1	Q8TEA8	209 aa		11.52	□□□□□ -0.57
PLD3-223	ENST00000600948	ST8SIA2	Q92186	375 aa		11.52	□□□□□ -0.57
PLD3-223	ENST00000600948	VSIR	Q9H7M9	311 aa		11.52	□□□□□ -0.57
PLD3-223	ENST00000600948	UBQLN2	Q9UHD9	624 aa		11.52	□□□□□ -0.57
PLD3-223	ENST00000600948	NDUFB6	O95139	128 aa		11.51	□□□□□ -0.57
PLD3-223	ENST00000600948	IGLC1	P0CG04	106 aa		11.51	□□□□□ -0.57
PLD3-223	ENST00000600948	RND2	P52198	227 aa		11.51	□□□□□ -0.57
PLD3-223	ENST00000600948	UBE2M	P61081	183 aa	Known RBP	11.51	□□□□□ -0.57
PLD3-223	ENST00000600948	TIGIT	Q495A1	244 aa		11.51	□□□□□ -0.57
PLD3-223	ENST00000600948	NOXA1	Q86UR1	476 aa		11.51	□□□□□ -0.57
PLD3-223	ENST00000600948	LILRB2	Q8N423	598 aa		11.51	□□□□□ -0.57
PLD3-223	ENST00000600948	FAM110A	Q9BQ89	295 aa		11.51	□□□□□ -0.57
PLD3-223	ENST00000600948	GGTLC1	Q9BX51	225 aa		11.51	□□□□□ -0.57
PLD3-223	ENST00000600948		U3KQ87	197 aa		11.51	□□□□□ -0.57
PLD3-223	ENST00000600948	TRAV30	A0A087WSZ9	112 aa		11.5	□□□□□ -0.57
PLD3-223	ENST00000600948	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	11.5	□□□□□ -0.57
PLD3-223	ENST00000600948	SCGB2A1	O75556	95 aa		11.5	□□□□□ -0.57
PLD3-223	ENST00000600948	IFNA10	P01566	189 aa		11.5	□□□□□ -0.57
PLD3-223	ENST00000600948	SLC25A6	P12236	298 aa		11.5	□□□□□ -0.57
PLD3-223	ENST00000600948	IL7	P13232	177 aa		11.5	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms