RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 S4R3C0 116 aa12.9□□□□□ -0.34
USHBP1-210ENST00000600286 H3BP45 60 aa12.89□□□□□ -0.35
USHBP1-210ENST00000600286 NUPL2O15504 423 aaKnown RBP12.89□□□□□ -0.35
USHBP1-210ENST00000600286 CD33P20138 364 aa12.89□□□□□ -0.35
USHBP1-210ENST00000600286 CAV2P51636 162 aa12.89□□□□□ -0.35
USHBP1-210ENST00000600286 H2BFSP57053 126 aa12.89□□□□□ -0.35
USHBP1-210ENST00000600286 FCN2Q15485 313 aa12.89□□□□□ -0.35
USHBP1-210ENST00000600286 FAM106AQ4KMX7 169 aa12.89□□□□□ -0.35
USHBP1-210ENST00000600286 CACNG8Q8WXS5 425 aa12.89□□□□□ -0.35
USHBP1-210ENST00000600286 SLC35E1Q96K37 410 aa12.89□□□□□ -0.35
USHBP1-210ENST00000600286 DUX3Q96PT4 197 aa12.89□□□□□ -0.35
USHBP1-210ENST00000600286 IGHV4OR15-8A0A075B7B6 117 aa12.88□□□□□ -0.35
USHBP1-210ENST00000600286 TRAV30A0A087WSZ9 112 aa12.88□□□□□ -0.35
USHBP1-210ENST00000600286 A0A087WW49 117 aa12.88□□□□□ -0.35
USHBP1-210ENST00000600286 E5RGE8 158 aa12.88□□□□□ -0.35
USHBP1-210ENST00000600286 TSPAN15O95858 294 aa12.88□□□□□ -0.35
USHBP1-210ENST00000600286 FCGR2BP31994 310 aaPredicted RBP12.88□□□□□ -0.35
USHBP1-210ENST00000600286 GPR183P32249 361 aa12.88□□□□□ -0.35
USHBP1-210ENST00000600286 FGL1Q08830 312 aa12.88□□□□□ -0.35
USHBP1-210ENST00000600286 IL15RAQ13261 267 aa12.88□□□□□ -0.35
USHBP1-210ENST00000600286 LRRC37A5PQ49AS3 106 aa12.88□□□□□ -0.35
USHBP1-210ENST00000600286 OR10P1Q8NGE3 313 aa12.88□□□□□ -0.35
USHBP1-210ENST00000600286 PPP1R1CQ8WVI7 109 aa12.88□□□□□ -0.35
USHBP1-210ENST00000600286 ZNF436Q9C0F3 470 aaPredicted RBP12.88□□□□□ -0.35
USHBP1-210ENST00000600286 OR2T8A6NH00 312 aa12.87□□□□□ -0.35
USHBP1-210ENST00000600286 C15orf62A8K5M9 175 aa12.87□□□□□ -0.35
USHBP1-210ENST00000600286 DEDDO75618 318 aa12.87□□□□□ -0.35
USHBP1-210ENST00000600286 RELQ04864 619 aaPredicted RBP12.87□□□□□ -0.35
USHBP1-210ENST00000600286 CD69Q07108 199 aa12.87□□□□□ -0.35
USHBP1-210ENST00000600286 PRR31Q5SQ13 230 aa12.87□□□□□ -0.35
USHBP1-210ENST00000600286 STX12Q86Y82 276 aa12.87□□□□□ -0.35
USHBP1-210ENST00000600286 OR4X1Q8NH49 305 aa12.87□□□□□ -0.35
USHBP1-210ENST00000600286 THAP6Q8TBB0 222 aa12.87□□□□□ -0.35
USHBP1-210ENST00000600286 SLC25A31Q9H0C2 315 aa12.87□□□□□ -0.35
USHBP1-210ENST00000600286 TGOLN2O43493 480 aa12.86□□□□□ -0.35
USHBP1-210ENST00000600286 IGHV3-48P01763 117 aa12.86□□□□□ -0.35
USHBP1-210ENST00000600286 GIPP09681 153 aaPredicted RBP12.86□□□□□ -0.35
USHBP1-210ENST00000600286 CXCL3P19876 107 aa12.86□□□□□ -0.35
USHBP1-210ENST00000600286 HOXD3P31249 432 aaPredicted RBP12.86□□□□□ -0.35
USHBP1-210ENST00000600286 PAX9P55771 341 aa12.86□□□□□ -0.35
USHBP1-210ENST00000600286 RAP2BP61225 183 aa12.86□□□□□ -0.35
USHBP1-210ENST00000600286 FHL3Q13643 280 aa12.86□□□□□ -0.35
USHBP1-210ENST00000600286 OR8G2PQ6IF36 304 aa12.86□□□□□ -0.35
USHBP1-210ENST00000600286 C11orf87Q6NUJ2 197 aa12.86□□□□□ -0.35
USHBP1-210ENST00000600286 SLC16A13Q7RTY0 426 aa12.86□□□□□ -0.35
USHBP1-210ENST00000600286 CCDC140Q96MF4 163 aa12.86□□□□□ -0.35
USHBP1-210ENST00000600286 OR4C12Q96R67 309 aa12.86□□□□□ -0.35
USHBP1-210ENST00000600286 MCRIP2Q9BUT9 160 aaKnown RBP12.86□□□□□ -0.35
USHBP1-210ENST00000600286 ELOVL1Q9BW60 279 aa12.86□□□□□ -0.35
USHBP1-210ENST00000600286 PPP5D1E7EU14 171 aa12.85□□□□□ -0.35
USHBP1-210ENST00000600286 BMPR1BO00238 502 aa12.85□□□□□ -0.35
USHBP1-210ENST00000600286 CLN5O75503 358 aa12.85□□□□□ -0.35
USHBP1-210ENST00000600286 OR2C1O95371 312 aa12.85□□□□□ -0.35
USHBP1-210ENST00000600286 MPC2O95563 127 aa12.85□□□□□ -0.35
USHBP1-210ENST00000600286 TRBV12-3P01733 135 aa12.85□□□□□ -0.35
USHBP1-210ENST00000600286 FABP1P07148 127 aa12.85□□□□□ -0.35
USHBP1-210ENST00000600286 METTL15P1P0C7V9 234 aa12.85□□□□□ -0.35
USHBP1-210ENST00000600286 NUP62P37198 522 aaPredicted RBP12.85□□□□□ -0.35
USHBP1-210ENST00000600286 TREML4Q6UXN2 200 aa12.85□□□□□ -0.35
USHBP1-210ENST00000600286 TMEM14EPQ6UXP3 125 aa12.85□□□□□ -0.35
USHBP1-210ENST00000600286 TMEM116Q8NCL8 245 aa12.85□□□□□ -0.35
USHBP1-210ENST00000600286 OR11H7Q8NGC8 314 aa12.85□□□□□ -0.35
USHBP1-210ENST00000600286 TMEM170AQ8WVE7 144 aa12.85□□□□□ -0.35
USHBP1-210ENST00000600286 ACY3Q96HD9 319 aa12.85□□□□□ -0.35
USHBP1-210ENST00000600286 GPR61Q9BZJ8 451 aa12.85□□□□□ -0.35
USHBP1-210ENST00000600286 FNDC4Q9H6D8 234 aaPredicted RBP12.85□□□□□ -0.35
USHBP1-210ENST00000600286 PEMTQ9UBM1 199 aa12.85□□□□□ -0.35
USHBP1-210ENST00000600286 OVOL1O14753 267 aa12.84□□□□□ -0.35
USHBP1-210ENST00000600286 TMEM50AO95807 157 aa12.84□□□□□ -0.35
USHBP1-210ENST00000600286 P2RY1P47900 373 aa12.84□□□□□ -0.35
USHBP1-210ENST00000600286 RND2P52198 227 aa12.84□□□□□ -0.35
USHBP1-210ENST00000600286 SLURP1P55000 103 aa12.84□□□□□ -0.35
USHBP1-210ENST00000600286 HBG1P69891 147 aa12.84□□□□□ -0.35
USHBP1-210ENST00000600286 HBG2P69892 147 aa12.84□□□□□ -0.35
USHBP1-210ENST00000600286 MLANAQ16655 118 aa12.84□□□□□ -0.35
USHBP1-210ENST00000600286 PRSS54Q6PEW0 395 aa12.84□□□□□ -0.35
USHBP1-210ENST00000600286 GPHB5Q86YW7 130 aa12.84□□□□□ -0.35
USHBP1-210ENST00000600286 C1QL4Q86Z23 238 aa12.84□□□□□ -0.35
USHBP1-210ENST00000600286 LINC00482Q8N8I6 264 aa12.84□□□□□ -0.35
USHBP1-210ENST00000600286 NPIPB3Q92617 1050 aa12.84□□□□□ -0.35
USHBP1-210ENST00000600286 ZC4H2Q9NQZ6 224 aa12.84□□□□□ -0.35
USHBP1-210ENST00000600286 LYRM2Q9NU23 88 aaPredicted RBP12.84□□□□□ -0.35
USHBP1-210ENST00000600286 ZNF320A2RRD8 509 aa12.83□□□□□ -0.36
USHBP1-210ENST00000600286 SMCO3A2RU48 225 aa12.83□□□□□ -0.36
USHBP1-210ENST00000600286 FAM24AA6NFZ4 105 aa12.83□□□□□ -0.36
USHBP1-210ENST00000600286 WIPF1O43516 503 aa12.83□□□□□ -0.36
USHBP1-210ENST00000600286 KLF5Q13887 457 aaPredicted RBP12.83□□□□□ -0.36
USHBP1-210ENST00000600286 Q6ZNX1 250 aa12.83□□□□□ -0.36
USHBP1-210ENST00000600286 WFDC9Q8NEX5 89 aa12.83□□□□□ -0.36
USHBP1-210ENST00000600286 OR1S2Q8NGQ3 325 aa12.83□□□□□ -0.36
USHBP1-210ENST00000600286 DLX4Q92988 240 aaPredicted RBP12.83□□□□□ -0.36
USHBP1-210ENST00000600286 RCC1LQ96I51 464 aaKnown RBP12.83□□□□□ -0.36
USHBP1-210ENST00000600286 GGACTQ9BVM4 153 aa12.83□□□□□ -0.36
USHBP1-210ENST00000600286 PRKDCP78527 4128 aaKnown RBP12.82□□□□□ -0.36
USHBP1-210ENST00000600286 ZFP92A6NM28 416 aa12.82□□□□□ -0.36
USHBP1-210ENST00000600286 YIF1AO95070 293 aa12.82□□□□□ -0.36
USHBP1-210ENST00000600286 CTSGP08311 255 aa12.82□□□□□ -0.36
USHBP1-210ENST00000600286 OR10J1P30954 320 aa12.82□□□□□ -0.36
USHBP1-210ENST00000600286 S100A11P31949 105 aa12.82□□□□□ -0.36
USHBP1-210ENST00000600286 SULT1A1P50225 295 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 262.6 ms