RNA–Protein interactions for RNA: ENST00000600237.5

SYMPK-215, Transcript of symplekin, humanhuman

TSL 5

Gene SYMPK, Length 5,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-215ENST00000600237 TMEM170BQ5T4T1 132 aa12.08□□□□□ -0.47
SYMPK-215ENST00000600237 FAM19A2Q8N3H0 131 aa12.08□□□□□ -0.47
SYMPK-215ENST00000600237 EPDR1Q9UM22 224 aa12.08□□□□□ -0.47
SYMPK-215ENST00000600237 EFNB3Q15768 340 aa12.08□□□□□ -0.48
SYMPK-215ENST00000600237 CENPVQ7Z7K6 275 aaPredicted RBP12.08□□□□□ -0.48
SYMPK-215ENST00000600237 RNASE7Q9H1E1 156 aaKnown RBP12.08□□□□□ -0.48
SYMPK-215ENST00000600237 TMEM133Q9H2Q1 129 aa12.08□□□□□ -0.48
SYMPK-215ENST00000600237 LINC00587B1AMM8 73 aa12.08□□□□□ -0.48
SYMPK-215ENST00000600237 ASCL2Q99929 193 aa12.08□□□□□ -0.48
SYMPK-215ENST00000600237 CYTL1Q9NRR1 136 aa12.08□□□□□ -0.48
SYMPK-215ENST00000600237 TEX38Q6PEX7 206 aa12.08□□□□□ -0.48
SYMPK-215ENST00000600237 SLC50A1Q9BRV3 221 aa12.08□□□□□ -0.48
SYMPK-215ENST00000600237 FABP5P3A8MUU1 101 aa12.07□□□□□ -0.48
SYMPK-215ENST00000600237 SCGB3A1Q96QR1 104 aa12.07□□□□□ -0.48
SYMPK-215ENST00000600237 MTURNQ8N3F0 131 aa12.07□□□□□ -0.48
SYMPK-215ENST00000600237 FGFBP3Q8TAT2 258 aa12.07□□□□□ -0.48
SYMPK-215ENST00000600237 TNFRSF14Q92956 283 aa12.07□□□□□ -0.48
SYMPK-215ENST00000600237 GNB1LQ9BYB4 327 aa12.07□□□□□ -0.48
SYMPK-215ENST00000600237 NUTF2P61970 127 aaKnown RBP12.07□□□□□ -0.48
SYMPK-215ENST00000600237 OCC1Q8TAD7 63 aa12.07□□□□□ -0.48
SYMPK-215ENST00000600237 LAMTOR2Q9Y2Q5 125 aa12.07□□□□□ -0.48
SYMPK-215ENST00000600237 C19orf67A6NJJ6 358 aa12.07□□□□□ -0.48
SYMPK-215ENST00000600237 E9PLN8 166 aa12.07□□□□□ -0.48
SYMPK-215ENST00000600237 ARL6IP6Q8N6S5 226 aa12.07□□□□□ -0.48
SYMPK-215ENST00000600237 VKORC1Q9BQB6 163 aa12.07□□□□□ -0.48
SYMPK-215ENST00000600237 ZNF257Q9Y2Q1 563 aa12.07□□□□□ -0.48
SYMPK-215ENST00000600237 S4R3C0 116 aa12.07□□□□□ -0.48
SYMPK-215ENST00000600237 IGHV3-49A0A0A0MS15 119 aa12.06□□□□□ -0.48
SYMPK-215ENST00000600237 SRRM5B3KS81 715 aa12.06□□□□□ -0.48
SYMPK-215ENST00000600237 C9JCJ5 164 aa12.06□□□□□ -0.48
SYMPK-215ENST00000600237 NPFFO15130 113 aa12.06□□□□□ -0.48
SYMPK-215ENST00000600237 ADMP35318 185 aa12.06□□□□□ -0.48
SYMPK-215ENST00000600237 GGNQ86UU5 652 aa12.06□□□□□ -0.48
SYMPK-215ENST00000600237 NIT1Q86X76 327 aa12.06□□□□□ -0.48
SYMPK-215ENST00000600237 RNF125Q96EQ8 232 aa12.06□□□□□ -0.48
SYMPK-215ENST00000600237 FOXC2Q99958 501 aa12.06□□□□□ -0.48
SYMPK-215ENST00000600237 SCGB1A1P11684 91 aa12.06□□□□□ -0.48
SYMPK-215ENST00000600237 COLCA2A8K830 154 aa12.06□□□□□ -0.48
SYMPK-215ENST00000600237 OR9G9P0C7N8 305 aa12.06□□□□□ -0.48
SYMPK-215ENST00000600237 PAX1P15863 534 aa12.06□□□□□ -0.48
SYMPK-215ENST00000600237 WNK2Q9Y3S1 2297 aa12.06□□□□□ -0.48
SYMPK-215ENST00000600237 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.06□□□□□ -0.48
SYMPK-215ENST00000600237 IGHV3-23P01764 117 aa12.06□□□□□ -0.48
SYMPK-215ENST00000600237 PCP4P48539 62 aa12.06□□□□□ -0.48
SYMPK-215ENST00000600237 NMSQ5H8A3 153 aa12.06□□□□□ -0.48
SYMPK-215ENST00000600237 C1QL4Q86Z23 238 aa12.06□□□□□ -0.48
SYMPK-215ENST00000600237 TNFRSF18Q9Y5U5 241 aa12.06□□□□□ -0.48
SYMPK-215ENST00000600237 PPBPP02775 128 aa12.05□□□□□ -0.48
SYMPK-215ENST00000600237 STAG3L3P0CL85 134 aa12.05□□□□□ -0.48
SYMPK-215ENST00000600237 SUMO2P61956 95 aaKnown RBP12.05□□□□□ -0.48
SYMPK-215ENST00000600237 MRPL16Q9NX20 251 aaKnown RBP12.05□□□□□ -0.48
SYMPK-215ENST00000600237 RPUSD1Q9UJJ7 312 aaKnown RBP12.05□□□□□ -0.48
SYMPK-215ENST00000600237 CACNA1GO43497 2377 aa12.05□□□□□ -0.48
SYMPK-215ENST00000600237 OR10J3Q5JRS4 329 aa12.05□□□□□ -0.48
SYMPK-215ENST00000600237 IGHV1-18A0A0C4DH31 117 aa12.05□□□□□ -0.48
SYMPK-215ENST00000600237 GBF1Q92538 1859 aa12.04□□□□□ -0.48
SYMPK-215ENST00000600237 IGHV3OR16-10A0A075B7F0 116 aa12.04□□□□□ -0.48
SYMPK-215ENST00000600237 FAM181BA6NEQ2 426 aa12.04□□□□□ -0.48
SYMPK-215ENST00000600237 DNAL4O96015 105 aa12.04□□□□□ -0.48
SYMPK-215ENST00000600237 IGKV3-20P01619 116 aa12.04□□□□□ -0.48
SYMPK-215ENST00000600237 SRSF4Q08170 494 aaKnown RBP12.04□□□□□ -0.48
SYMPK-215ENST00000600237 TREML4Q6UXN2 200 aa12.04□□□□□ -0.48
SYMPK-215ENST00000600237 FAM168AQ92567 244 aa12.04□□□□□ -0.48
SYMPK-215ENST00000600237 PINLYPA6NC86 204 aa12.04□□□□□ -0.48
SYMPK-215ENST00000600237 LY6DQ14210 128 aa12.04□□□□□ -0.48
SYMPK-215ENST00000600237 MESP1Q9BRJ9 268 aa12.04□□□□□ -0.48
SYMPK-215ENST00000600237 TTC32Q5I0X7 151 aa12.04□□□□□ -0.48
SYMPK-215ENST00000600237 CLEC19AQ6UXS0 136 aa12.04□□□□□ -0.48
SYMPK-215ENST00000600237 ATP5L2Q7Z4Y8 100 aa12.04□□□□□ -0.48
SYMPK-215ENST00000600237 HIST1H2BLQ99880 126 aa12.04□□□□□ -0.48
SYMPK-215ENST00000600237 GGTLC1Q9BX51 225 aa12.04□□□□□ -0.48
SYMPK-215ENST00000600237 RLFQ13129 1914 aa12.04□□□□□ -0.48
SYMPK-215ENST00000600237 POLEQ07864 2286 aa12.04□□□□□ -0.48
SYMPK-215ENST00000600237 IGKV1-27A0A075B6S5 117 aa12.04□□□□□ -0.48
SYMPK-215ENST00000600237 TRAV9-2A0A087WT02 112 aa12.04□□□□□ -0.48
SYMPK-215ENST00000600237 TMEM42Q69YG0 159 aa12.04□□□□□ -0.48
SYMPK-215ENST00000600237 FOXF2Q12947 444 aa12.03□□□□□ -0.48
SYMPK-215ENST00000600237 SPRR3Q9UBC9 169 aa12.03□□□□□ -0.48
SYMPK-215ENST00000600237 GPR179Q6PRD1 2367 aa12.03□□□□□ -0.48
SYMPK-215ENST00000600237 TRBV6-6A0A0A6YYG2 114 aa12.03□□□□□ -0.48
SYMPK-215ENST00000600237 IGHV3-66A0A0C4DH42 116 aa12.03□□□□□ -0.48
SYMPK-215ENST00000600237 PYYP10082 97 aa12.03□□□□□ -0.48
SYMPK-215ENST00000600237 GNG5P63218 68 aa12.03□□□□□ -0.48
SYMPK-215ENST00000600237 TSKUQ8WUA8 353 aa12.03□□□□□ -0.48
SYMPK-215ENST00000600237 FOXL1Q12952 345 aa12.03□□□□□ -0.48
SYMPK-215ENST00000600237 DMRTA1Q5VZB9 504 aa12.03□□□□□ -0.48
SYMPK-215ENST00000600237 ST6GALNAC6Q969X2 333 aa12.03□□□□□ -0.48
SYMPK-215ENST00000600237 NXT2Q9NPJ8 142 aaKnown RBP12.03□□□□□ -0.48
SYMPK-215ENST00000600237 PSG8Q9UQ74 426 aa12.03□□□□□ -0.48
SYMPK-215ENST00000600237 TMEM14EPQ6UXP3 125 aa12.03□□□□□ -0.48
SYMPK-215ENST00000600237 VSIRQ9H7M9 311 aa12.03□□□□□ -0.48
SYMPK-215ENST00000600237 PNRC2Q9NPJ4 139 aaKnown RBP12.03□□□□□ -0.48
SYMPK-215ENST00000600237 THADAQ6YHU6 1953 aa12.02□□□□□ -0.48
SYMPK-215ENST00000600237 MUC21A0A0G2JKD1 596 aa12.02□□□□□ -0.48
SYMPK-215ENST00000600237 MUC21A0A140T8X8 626 aa12.02□□□□□ -0.48
SYMPK-215ENST00000600237 SMAD7O15105 426 aaKnown RBP12.02□□□□□ -0.48
SYMPK-215ENST00000600237 LINC00614P0C842 121 aa12.02□□□□□ -0.48
SYMPK-215ENST00000600237 TIMP3P35625 211 aa12.02□□□□□ -0.48
SYMPK-215ENST00000600237 MUC21Q5SSG8 566 aa12.02□□□□□ -0.48
SYMPK-215ENST00000600237 MRAP2Q96G30 205 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms