RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 A8MWP6 167 aa11.52□□□□□ -0.57
LIG1-219ENST00000600055 PTTG1O95997 202 aa11.52□□□□□ -0.57
LIG1-219ENST00000600055 CBLN1P23435 193 aa11.52□□□□□ -0.57
LIG1-219ENST00000600055 FCGR2BP31994 310 aaPredicted RBP11.52□□□□□ -0.57
LIG1-219ENST00000600055 OPRK1P41145 380 aa11.52□□□□□ -0.57
LIG1-219ENST00000600055 RGS21Q2M5E4 152 aa11.52□□□□□ -0.57
LIG1-219ENST00000600055 C2orf83Q53S99 150 aa11.52□□□□□ -0.57
LIG1-219ENST00000600055 DUSP18Q8NEJ0 188 aa11.52□□□□□ -0.57
LIG1-219ENST00000600055 COQ8AQ8NI60 647 aa11.52□□□□□ -0.57
LIG1-219ENST00000600055 DTD1Q8TEA8 209 aa11.52□□□□□ -0.57
LIG1-219ENST00000600055 TXN2Q99757 166 aa11.52□□□□□ -0.57
LIG1-219ENST00000600055 NUDT15Q9NV35 164 aa11.52□□□□□ -0.57
LIG1-219ENST00000600055 CACFD1Q9UGQ2 172 aa11.52□□□□□ -0.57
LIG1-219ENST00000600055 LSM4Q9Y4Z0 139 aaKnown RBP11.52□□□□□ -0.57
LIG1-219ENST00000600055 CORTO00230 105 aa11.51□□□□□ -0.57
LIG1-219ENST00000600055 NUPL2O15504 423 aaKnown RBP11.51□□□□□ -0.57
LIG1-219ENST00000600055 GNG7O60262 68 aa11.51□□□□□ -0.57
LIG1-219ENST00000600055 SLC25A6P12236 298 aa11.51□□□□□ -0.57
LIG1-219ENST00000600055 NPY1RP25929 384 aa11.51□□□□□ -0.57
LIG1-219ENST00000600055 DEFB114Q30KQ6 69 aa11.51□□□□□ -0.57
LIG1-219ENST00000600055 CD300EQ496F6 205 aaPredicted RBP11.51□□□□□ -0.57
LIG1-219ENST00000600055 UXS1Q8NBZ7 420 aa11.51□□□□□ -0.57
LIG1-219ENST00000600055 DYNLRB2Q8TF09 96 aa11.51□□□□□ -0.57
LIG1-219ENST00000600055 TMEM190Q8WZ59 177 aa11.51□□□□□ -0.57
LIG1-219ENST00000600055 C20orf24Q9BUV8 137 aa11.51□□□□□ -0.57
LIG1-219ENST00000600055 NDUFA4O00483 81 aa11.5□□□□□ -0.57
LIG1-219ENST00000600055 ZNF207O43670 478 aaKnown RBP11.5□□□□□ -0.57
LIG1-219ENST00000600055 IFNA10P01566 189 aa11.5□□□□□ -0.57
LIG1-219ENST00000600055 H2AFB2P0C5Z0 115 aa11.5□□□□□ -0.57
LIG1-219ENST00000600055 IAPPP10997 89 aa11.5□□□□□ -0.57
LIG1-219ENST00000600055 NPBWR1P48145 328 aa11.5□□□□□ -0.57
LIG1-219ENST00000600055 SEC22CQ9BRL7 303 aa11.5□□□□□ -0.57
LIG1-219ENST00000600055 MAGT1Q9H0U3 335 aa11.5□□□□□ -0.57
LIG1-219ENST00000600055 GAR1Q9NY12 217 aaKnown RBP11.5□□□□□ -0.57
LIG1-219ENST00000600055 MLXQ9UH92 298 aa11.5□□□□□ -0.57
LIG1-219ENST00000600055 UFC1Q9Y3C8 167 aa11.5□□□□□ -0.57
LIG1-219ENST00000600055 TMEM50AO95807 157 aa11.49□□□□□ -0.57
LIG1-219ENST00000600055 C8orf88P0DMB2 117 aa11.49□□□□□ -0.57
LIG1-219ENST00000600055 RELQ04864 619 aaPredicted RBP11.49□□□□□ -0.57
LIG1-219ENST00000600055 LCN12Q6JVE5 192 aa11.49□□□□□ -0.57
LIG1-219ENST00000600055 NRARPQ7Z6K4 114 aa11.49□□□□□ -0.57
LIG1-219ENST00000600055 MITD1Q8WV92 249 aa11.49□□□□□ -0.57
LIG1-219ENST00000600055 GPN1Q9HCN4 374 aaPredicted RBP11.49□□□□□ -0.57
LIG1-219ENST00000600055 U3KQ87 197 aa11.49□□□□□ -0.57
LIG1-219ENST00000600055 ZNF785A8K8V0 405 aa11.48□□□□□ -0.57
LIG1-219ENST00000600055 FAM90A26D6RGX4 464 aa11.48□□□□□ -0.57
LIG1-219ENST00000600055 PRAF2O60831 178 aa11.48□□□□□ -0.57
LIG1-219ENST00000600055 CLN5O75503 358 aa11.48□□□□□ -0.57
LIG1-219ENST00000600055 YIF1AO95070 293 aa11.48□□□□□ -0.57
LIG1-219ENST00000600055 IFNA21P01568 189 aa11.48□□□□□ -0.57
LIG1-219ENST00000600055 ELLP55199 621 aaPredicted RBP11.48□□□□□ -0.57
LIG1-219ENST00000600055 BTNL8Q6UX41 500 aa11.48□□□□□ -0.57
LIG1-219ENST00000600055 Q8N1Y9 231 aa11.48□□□□□ -0.57
LIG1-219ENST00000600055 OR2K2Q8NGT1 345 aa11.48□□□□□ -0.57
LIG1-219ENST00000600055 OR4X1Q8NH49 305 aa11.48□□□□□ -0.57
LIG1-219ENST00000600055 RNASEH2CQ8TDP1 164 aaKnown RBP11.48□□□□□ -0.57
LIG1-219ENST00000600055 TECRQ9NZ01 308 aaKnown RBP11.48□□□□□ -0.57
LIG1-219ENST00000600055 RPS10-NUDT3A0A1W2PQS6 291 aa11.47□□□□□ -0.57
LIG1-219ENST00000600055 WRBO00258 174 aa11.47□□□□□ -0.57
LIG1-219ENST00000600055 SYNGR2O43760 224 aa11.47□□□□□ -0.57
LIG1-219ENST00000600055 PRSS54Q6PEW0 395 aa11.47□□□□□ -0.57
LIG1-219ENST00000600055 ZNF431Q8TF32 576 aaPredicted RBP11.47□□□□□ -0.57
LIG1-219ENST00000600055 WDR89Q96FK6 387 aaPredicted RBP11.47□□□□□ -0.57
LIG1-219ENST00000600055 OR10C1Q96KK4 312 aa11.47□□□□□ -0.57
LIG1-219ENST00000600055 DAZ1Q9NQZ3 744 aaKnown RBP11.47□□□□□ -0.57
LIG1-219ENST00000600055 MRPL27Q9P0M9 148 aaKnown RBP11.47□□□□□ -0.57
LIG1-219ENST00000600055 SMAD5-AS1Q9Y6J3 95 aa11.47□□□□□ -0.57
LIG1-219ENST00000600055 C15orf62A8K5M9 175 aa11.46□□□□□ -0.57
LIG1-219ENST00000600055 INMT-MINDY4F8WBC2 141 aa11.46□□□□□ -0.57
LIG1-219ENST00000600055 CCSO14618 274 aa11.46□□□□□ -0.57
LIG1-219ENST00000600055 MED6O75586 246 aa11.46□□□□□ -0.57
LIG1-219ENST00000600055 IFNA4P05014 189 aa11.46□□□□□ -0.57
LIG1-219ENST00000600055 RND2P52198 227 aa11.46□□□□□ -0.57
LIG1-219ENST00000600055 POLR2GP62487 172 aaKnown RBP eCLIP11.46□□□□□ -0.57
LIG1-219ENST00000600055 ID3Q02535 119 aa11.46□□□□□ -0.57
LIG1-219ENST00000600055 GUCA2BQ16661 112 aa11.46□□□□□ -0.57
LIG1-219ENST00000600055 TIGITQ495A1 244 aa11.46□□□□□ -0.57
LIG1-219ENST00000600055 TOMM20LQ6UXN7 152 aa11.46□□□□□ -0.57
LIG1-219ENST00000600055 ZNF600Q6ZNG1 722 aa11.46□□□□□ -0.57
LIG1-219ENST00000600055 NOXA1Q86UR1 476 aa11.46□□□□□ -0.57
LIG1-219ENST00000600055 TMEM61Q8N0U2 210 aa11.46□□□□□ -0.57
LIG1-219ENST00000600055 OR4D5Q8NGN0 318 aa11.46□□□□□ -0.57
LIG1-219ENST00000600055 MARC2Q969Z3 335 aa11.46□□□□□ -0.57
LIG1-219ENST00000600055 MARVELD1Q9BSK0 173 aa11.46□□□□□ -0.57
LIG1-219ENST00000600055 PAIP2BQ9ULR5 123 aaKnown RBP11.46□□□□□ -0.57
LIG1-219ENST00000600055 PUS1Q9Y606 427 aaKnown RBP eCLIP11.46□□□□□ -0.57
LIG1-219ENST00000600055 IGHV3-49A0A0A0MS15 119 aa11.45□□□□□ -0.58
LIG1-219ENST00000600055 K7EMT4 169 aa11.45□□□□□ -0.58
LIG1-219ENST00000600055 SCAF4O95104 1147 aaKnown RBP11.45□□□□□ -0.58
LIG1-219ENST00000600055 IGKV1-17P01599 117 aa11.45□□□□□ -0.58
LIG1-219ENST00000600055 IL5P05113 134 aa11.45□□□□□ -0.58
LIG1-219ENST00000600055 SLC25A4P12235 298 aa11.45□□□□□ -0.58
LIG1-219ENST00000600055 CD69Q07108 199 aa11.45□□□□□ -0.58
LIG1-219ENST00000600055 IAH1Q2TAA2 248 aaPredicted RBP11.45□□□□□ -0.58
LIG1-219ENST00000600055 SLC16A13Q7RTY0 426 aa11.45□□□□□ -0.58
LIG1-219ENST00000600055 NPIPB3Q92617 1050 aa11.45□□□□□ -0.58
LIG1-219ENST00000600055 ACY3Q96HD9 319 aa11.45□□□□□ -0.58
LIG1-219ENST00000600055 B9D2Q9BPU9 175 aa11.45□□□□□ -0.58
LIG1-219ENST00000600055 ZFAND3Q9H8U3 227 aa11.45□□□□□ -0.58
LIG1-219ENST00000600055 IGHV3OR16-13A0A075B7E8 117 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms