RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 MARC2Q969Z3 335 aa10.47□□□□□ -0.73
UPF1-205ENST00000598209 C20orf24Q9BUV8 137 aa10.47□□□□□ -0.73
UPF1-205ENST00000598209 RBKSQ9H477 322 aa10.47□□□□□ -0.73
UPF1-205ENST00000598209 FNDC4Q9H6D8 234 aaPredicted RBP10.47□□□□□ -0.73
UPF1-205ENST00000598209 MLXQ9UH92 298 aa10.47□□□□□ -0.73
UPF1-205ENST00000598209 TMED3Q9Y3Q3 217 aa10.47□□□□□ -0.73
UPF1-205ENST00000598209 SELENOKQ9Y6D0 94 aa10.47□□□□□ -0.73
UPF1-205ENST00000598209 IGHV3OR16-8A0A075B7F1 116 aa10.46□□□□□ -0.73
UPF1-205ENST00000598209 PITX3O75364 302 aa10.46□□□□□ -0.73
UPF1-205ENST00000598209 C8orf88P0DMB2 117 aa10.46□□□□□ -0.73
UPF1-205ENST00000598209 SLC25A6P12236 298 aa10.46□□□□□ -0.73
UPF1-205ENST00000598209 NPY1RP25929 384 aa10.46□□□□□ -0.73
UPF1-205ENST00000598209 DHRS2Q13268 280 aa10.46□□□□□ -0.73
UPF1-205ENST00000598209 MLANAQ16655 118 aa10.46□□□□□ -0.73
UPF1-205ENST00000598209 C4orf46Q504U0 113 aa10.46□□□□□ -0.73
UPF1-205ENST00000598209 LYG2Q86SG7 212 aa10.46□□□□□ -0.73
UPF1-205ENST00000598209 Q8N1Y9 231 aa10.46□□□□□ -0.73
UPF1-205ENST00000598209 COQ8AQ8NI60 647 aa10.46□□□□□ -0.73
UPF1-205ENST00000598209 DTD1Q8TEA8 209 aa10.46□□□□□ -0.73
UPF1-205ENST00000598209 ZNF414Q96IQ9 312 aa10.46□□□□□ -0.73
UPF1-205ENST00000598209 C20orf85Q9H1P6 137 aa10.46□□□□□ -0.73
UPF1-205ENST00000598209 DAZ1Q9NQZ3 744 aaKnown RBP10.46□□□□□ -0.73
UPF1-205ENST00000598209 MRPL36Q9P0J6 103 aaKnown RBP10.46□□□□□ -0.73
UPF1-205ENST00000598209 MRPL27Q9P0M9 148 aaKnown RBP10.46□□□□□ -0.73
UPF1-205ENST00000598209 RPS10-NUDT3A0A1W2PQS6 291 aa10.45□□□□□ -0.74
UPF1-205ENST00000598209 ZNF785A8K8V0 405 aa10.45□□□□□ -0.74
UPF1-205ENST00000598209 ZNF207O43670 478 aaKnown RBP10.45□□□□□ -0.74
UPF1-205ENST00000598209 IFNA10P01566 189 aa10.45□□□□□ -0.74
UPF1-205ENST00000598209 GGNBP1Q5YKI7 109 aa10.45□□□□□ -0.74
UPF1-205ENST00000598209 BTNL8Q6UX41 500 aa10.45□□□□□ -0.74
UPF1-205ENST00000598209 GTSCR1Q86UQ5 136 aa10.45□□□□□ -0.74
UPF1-205ENST00000598209 NOXA1Q86UR1 476 aa10.45□□□□□ -0.74
UPF1-205ENST00000598209 RNASEH2CQ8TDP1 164 aaKnown RBP10.45□□□□□ -0.74
UPF1-205ENST00000598209 TMEM170AQ8WVE7 144 aa10.45□□□□□ -0.74
UPF1-205ENST00000598209 WDR89Q96FK6 387 aaPredicted RBP10.45□□□□□ -0.74
UPF1-205ENST00000598209 WDR12Q9GZL7 423 aaKnown RBP10.45□□□□□ -0.74
UPF1-205ENST00000598209 U3KQ87 197 aa10.45□□□□□ -0.74
UPF1-205ENST00000598209 C15orf62A8K5M9 175 aa10.44□□□□□ -0.74
UPF1-205ENST00000598209 FAM90A26D6RGX4 464 aa10.44□□□□□ -0.74
UPF1-205ENST00000598209 K7EMT4 169 aa10.44□□□□□ -0.74
UPF1-205ENST00000598209 CLN5O75503 358 aa10.44□□□□□ -0.74
UPF1-205ENST00000598209 ADAP1O75689 374 aa10.44□□□□□ -0.74
UPF1-205ENST00000598209 YIF1AO95070 293 aa10.44□□□□□ -0.74
UPF1-205ENST00000598209 TMEM50AO95807 157 aa10.44□□□□□ -0.74
UPF1-205ENST00000598209 TCRBP04435 133 aa10.44□□□□□ -0.74
UPF1-205ENST00000598209 ZNF846Q147U1 533 aa10.44□□□□□ -0.74
UPF1-205ENST00000598209 GUCA2BQ16661 112 aa10.44□□□□□ -0.74
UPF1-205ENST00000598209 TMEM61Q8N0U2 210 aa10.44□□□□□ -0.74
UPF1-205ENST00000598209 OR4X1Q8NH49 305 aa10.44□□□□□ -0.74
UPF1-205ENST00000598209 DNAH9Q9NYC9 4486 aa10.43□□□□□ -0.74
UPF1-205ENST00000598209 MED6O75586 246 aa10.43□□□□□ -0.74
UPF1-205ENST00000598209 IGHV4-30-4P0DP06 118 aa10.43□□□□□ -0.74
UPF1-205ENST00000598209 SLC25A4P12235 298 aa10.43□□□□□ -0.74
UPF1-205ENST00000598209 ZNF600Q6ZNG1 722 aa10.43□□□□□ -0.74
UPF1-205ENST00000598209 OR52B4Q8NGK2 314 aa10.43□□□□□ -0.74
UPF1-205ENST00000598209 OR10C1Q96KK4 312 aa10.43□□□□□ -0.74
UPF1-205ENST00000598209 ASCL2Q99929 193 aa10.43□□□□□ -0.74
UPF1-205ENST00000598209 TBC1D24Q9ULP9 559 aa10.43□□□□□ -0.74
UPF1-205ENST00000598209 TRAV6A0A075B6T7 132 aa10.42□□□□□ -0.74
UPF1-205ENST00000598209 TRAV25A0A0B4J276 109 aa10.42□□□□□ -0.74
UPF1-205ENST00000598209 MPTX1A8MV57 137 aa10.42□□□□□ -0.74
UPF1-205ENST00000598209 SCGB2A1O75556 95 aa10.42□□□□□ -0.74
UPF1-205ENST00000598209 UPK1BO75841 260 aa10.42□□□□□ -0.74
UPF1-205ENST00000598209 SCAF4O95104 1147 aaKnown RBP10.42□□□□□ -0.74
UPF1-205ENST00000598209 IFNA21P01568 189 aa10.42□□□□□ -0.74
UPF1-205ENST00000598209 FRMD6-AS1P0C7T7 363 aa10.42□□□□□ -0.74
UPF1-205ENST00000598209 IAPPP10997 89 aa10.42□□□□□ -0.74
UPF1-205ENST00000598209 RND2P52198 227 aa10.42□□□□□ -0.74
UPF1-205ENST00000598209 CD81P60033 236 aa10.42□□□□□ -0.74
UPF1-205ENST00000598209 ASAH1Q13510 395 aa10.42□□□□□ -0.74
UPF1-205ENST00000598209 ETFRF1Q6IPR1 90 aa10.42□□□□□ -0.74
UPF1-205ENST00000598209 MZT2BQ6NZ67 158 aa10.42□□□□□ -0.74
UPF1-205ENST00000598209 PRSS54Q6PEW0 395 aa10.42□□□□□ -0.74
UPF1-205ENST00000598209 TOMM20LQ6UXN7 152 aa10.42□□□□□ -0.74
UPF1-205ENST00000598209 RBPMS2Q6ZRY4 209 aaKnown RBP10.42□□□□□ -0.74
UPF1-205ENST00000598209 NEURL2Q9BR09 285 aa10.42□□□□□ -0.74
UPF1-205ENST00000598209 MAGT1Q9H0U3 335 aa10.42□□□□□ -0.74
UPF1-205ENST00000598209 NUDT15Q9NV35 164 aa10.42□□□□□ -0.74
UPF1-205ENST00000598209 PUS1Q9Y606 427 aaKnown RBP eCLIP10.42□□□□□ -0.74
UPF1-205ENST00000598209 TRAV30A0A087WSZ9 112 aa10.41□□□□□ -0.74
UPF1-205ENST00000598209 IGHV7-4-1A0A0J9YVY3 117 aa10.41□□□□□ -0.74
UPF1-205ENST00000598209 FAM240BA0A1B0GVZ2 78 aa10.41□□□□□ -0.74
UPF1-205ENST00000598209 A8MZ25 164 aa10.41□□□□□ -0.74
UPF1-205ENST00000598209 SYNGR2O43760 224 aa10.41□□□□□ -0.74
UPF1-205ENST00000598209 IFNA4P05014 189 aa10.41□□□□□ -0.74
UPF1-205ENST00000598209 CD7P09564 240 aa10.41□□□□□ -0.74
UPF1-205ENST00000598209 NHLRC4P0CG21 123 aaPredicted RBP10.41□□□□□ -0.74
UPF1-205ENST00000598209 ATP5IP56385 69 aaPredicted RBP10.41□□□□□ -0.74
UPF1-205ENST00000598209 TIGITQ495A1 244 aa10.41□□□□□ -0.74
UPF1-205ENST00000598209 TMEM116Q8NCL8 245 aa10.41□□□□□ -0.74
UPF1-205ENST00000598209 MITD1Q8WV92 249 aa10.41□□□□□ -0.74
UPF1-205ENST00000598209 GINS3Q9BRX5 216 aa10.41□□□□□ -0.74
UPF1-205ENST00000598209 ZFAND3Q9H8U3 227 aa10.41□□□□□ -0.74
UPF1-205ENST00000598209 SMPXQ9UHP9 88 aa10.41□□□□□ -0.74
UPF1-205ENST00000598209 IGHV3-49A0A0A0MS15 119 aa10.4□□□□□ -0.74
UPF1-205ENST00000598209 TRAV14DV4A0A0A6YYC5 116 aa10.4□□□□□ -0.74
UPF1-205ENST00000598209 WRBO00258 174 aa10.4□□□□□ -0.74
UPF1-205ENST00000598209 IGKV1-17P01599 117 aa10.4□□□□□ -0.74
UPF1-205ENST00000598209 H2AFB2P0C5Z0 115 aa10.4□□□□□ -0.74
UPF1-205ENST00000598209 LAMTOR1Q6IAA8 161 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms