RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 RLN2P04090 185 aa17.02■□□□□ 0.32
CHMP2A-204ENST00000597848 HOXD3P31249 432 aaPredicted RBP17.02■□□□□ 0.32
CHMP2A-204ENST00000597848 BCAP31P51572 246 aa17.02■□□□□ 0.32
CHMP2A-204ENST00000597848 FHL3Q13643 280 aa17.02■□□□□ 0.32
CHMP2A-204ENST00000597848 RPEL1Q2QD12 228 aa17.02■□□□□ 0.32
CHMP2A-204ENST00000597848 PRR31Q5SQ13 230 aa17.02■□□□□ 0.32
CHMP2A-204ENST00000597848 ETFRF1Q6IPR1 90 aa17.02■□□□□ 0.32
CHMP2A-204ENST00000597848 GAR1Q9NY12 217 aaKnown RBP17.02■□□□□ 0.32
CHMP2A-204ENST00000597848 BMPR1BO00238 502 aa17.01■□□□□ 0.31
CHMP2A-204ENST00000597848 TSC22D2O75157 780 aa17.01■□□□□ 0.31
CHMP2A-204ENST00000597848 GGCTO75223 188 aaKnown RBP17.01■□□□□ 0.31
CHMP2A-204ENST00000597848 NPBWR1P48145 328 aa17.01■□□□□ 0.31
CHMP2A-204ENST00000597848 LINC00482Q8N8I6 264 aa17.01■□□□□ 0.31
CHMP2A-204ENST00000597848 PPP1R1CQ8WVI7 109 aa17.01■□□□□ 0.31
CHMP2A-204ENST00000597848 TXN2Q99757 166 aa17.01■□□□□ 0.31
CHMP2A-204ENST00000597848 GNG7O60262 68 aa17■□□□□ 0.31
CHMP2A-204ENST00000597848 OR2C1O95371 312 aa17■□□□□ 0.31
CHMP2A-204ENST00000597848 SLC25A4P12235 298 aa17■□□□□ 0.31
CHMP2A-204ENST00000597848 CD33P20138 364 aa17■□□□□ 0.31
CHMP2A-204ENST00000597848 CAV2P51636 162 aa17■□□□□ 0.31
CHMP2A-204ENST00000597848 CD69Q07108 199 aa17■□□□□ 0.31
CHMP2A-204ENST00000597848 TREML4Q6UXN2 200 aa17■□□□□ 0.31
CHMP2A-204ENST00000597848 DCUN1D4Q92564 292 aa17■□□□□ 0.31
CHMP2A-204ENST00000597848 BSCL2Q96G97 398 aaPredicted RBP17■□□□□ 0.31
CHMP2A-204ENST00000597848 ATP6V0BQ99437 205 aa17■□□□□ 0.31
CHMP2A-204ENST00000597848 F8W735 103 aaPredicted RBP16.99■□□□□ 0.31
CHMP2A-204ENST00000597848 TGOLN2O43493 480 aa16.99■□□□□ 0.31
CHMP2A-204ENST00000597848 GPX4P36969 197 aaPredicted RBP16.99■□□□□ 0.31
CHMP2A-204ENST00000597848 OR8G2PQ6IF36 304 aa16.99■□□□□ 0.31
CHMP2A-204ENST00000597848 SLC16A13Q7RTY0 426 aa16.99■□□□□ 0.31
CHMP2A-204ENST00000597848 DLX4Q92988 240 aaPredicted RBP16.99■□□□□ 0.31
CHMP2A-204ENST00000597848 ZNF436Q9C0F3 470 aaPredicted RBP16.99■□□□□ 0.31
CHMP2A-204ENST00000597848 MRPL36Q9P0J6 103 aaKnown RBP16.99■□□□□ 0.31
CHMP2A-204ENST00000597848 WNK1Q9H4A3 2382 aa16.99■□□□□ 0.31
CHMP2A-204ENST00000597848 NUPL2O15504 423 aaKnown RBP16.98■□□□□ 0.31
CHMP2A-204ENST00000597848 DEDDO75618 318 aa16.98■□□□□ 0.31
CHMP2A-204ENST00000597848 METTL15P1P0C7V9 234 aa16.98■□□□□ 0.31
CHMP2A-204ENST00000597848 FCGR2BP31994 310 aaPredicted RBP16.98■□□□□ 0.31
CHMP2A-204ENST00000597848 RND2P52198 227 aa16.98■□□□□ 0.31
CHMP2A-204ENST00000597848 PRSS54Q6PEW0 395 aa16.98■□□□□ 0.31
CHMP2A-204ENST00000597848 SPSB3Q6PJ21 355 aa16.98■□□□□ 0.31
CHMP2A-204ENST00000597848 TMEM14EPQ6UXP3 125 aa16.98■□□□□ 0.31
CHMP2A-204ENST00000597848 OR4X1Q8NH49 305 aa16.98■□□□□ 0.31
CHMP2A-204ENST00000597848 ACY3Q96HD9 319 aa16.98■□□□□ 0.31
CHMP2A-204ENST00000597848 SLC35E1Q96K37 410 aa16.98■□□□□ 0.31
CHMP2A-204ENST00000597848 C11orf1Q9H5F2 150 aa16.98■□□□□ 0.31
CHMP2A-204ENST00000597848 ANK2Q01484 3957 aa16.97■□□□□ 0.31
CHMP2A-204ENST00000597848 IGHV3-35A0A0C4DH35 117 aa16.97■□□□□ 0.31
CHMP2A-204ENST00000597848 FAM24AA6NFZ4 105 aa16.97■□□□□ 0.31
CHMP2A-204ENST00000597848 SYNJ2BPP57105 145 aa16.97■□□□□ 0.31
CHMP2A-204ENST00000597848 KLF5Q13887 457 aaPredicted RBP16.97■□□□□ 0.31
CHMP2A-204ENST00000597848 Q6ZNX1 250 aa16.97■□□□□ 0.31
CHMP2A-204ENST00000597848 CACNG8Q8WXS5 425 aa16.97■□□□□ 0.31
CHMP2A-204ENST00000597848 NPIPB3Q92617 1050 aa16.97■□□□□ 0.31
CHMP2A-204ENST00000597848 CHRDL1Q9BU40 450 aa16.97■□□□□ 0.31
CHMP2A-204ENST00000597848 OR5AC2Q9NZP5 309 aa16.97■□□□□ 0.31
CHMP2A-204ENST00000597848 E5RGE8 158 aa16.96■□□□□ 0.31
CHMP2A-204ENST00000597848 OVOL1O14753 267 aa16.96■□□□□ 0.31
CHMP2A-204ENST00000597848 CLN5O75503 358 aa16.96■□□□□ 0.31
CHMP2A-204ENST00000597848 SCGB2A1O75556 95 aa16.96■□□□□ 0.31
CHMP2A-204ENST00000597848 CCNKO75909 580 aa16.96■□□□□ 0.31
CHMP2A-204ENST00000597848 MPC2O95563 127 aa16.96■□□□□ 0.31
CHMP2A-204ENST00000597848 CTSGP08311 255 aa16.96■□□□□ 0.31
CHMP2A-204ENST00000597848 PET100P0DJ07 73 aa16.96■□□□□ 0.31
CHMP2A-204ENST00000597848 WFDC9Q8NEX5 89 aa16.96■□□□□ 0.31
CHMP2A-204ENST00000597848 OR10P1Q8NGE3 313 aa16.96■□□□□ 0.31
CHMP2A-204ENST00000597848 ZNF320A2RRD8 509 aa16.95■□□□□ 0.3
CHMP2A-204ENST00000597848 H0YIZ8 118 aa16.95■□□□□ 0.3
CHMP2A-204ENST00000597848 GIPP09681 153 aaPredicted RBP16.95■□□□□ 0.3
CHMP2A-204ENST00000597848 ADMP35318 185 aa16.95■□□□□ 0.3
CHMP2A-204ENST00000597848 GAMTQ14353 236 aa16.95■□□□□ 0.3
CHMP2A-204ENST00000597848 FAM106AQ4KMX7 169 aa16.95■□□□□ 0.3
CHMP2A-204ENST00000597848 C1QL4Q86Z23 238 aa16.95■□□□□ 0.3
CHMP2A-204ENST00000597848 TMEM116Q8NCL8 245 aa16.95■□□□□ 0.3
CHMP2A-204ENST00000597848 LYRM2Q9NU23 88 aaPredicted RBP16.95■□□□□ 0.3
CHMP2A-204ENST00000597848 TRAV30A0A087WSZ9 112 aa16.94■□□□□ 0.3
CHMP2A-204ENST00000597848 GPHB5Q86YW7 130 aa16.94■□□□□ 0.3
CHMP2A-204ENST00000597848 ASB13Q8WXK3 278 aa16.94■□□□□ 0.3
CHMP2A-204ENST00000597848 RNF126Q9BV68 326 aa16.94■□□□□ 0.3
CHMP2A-204ENST00000597848 PMS2P5A8MQ11 134 aa16.93■□□□□ 0.3
CHMP2A-204ENST00000597848 PRSS46E5RG02 174 aa16.93■□□□□ 0.3
CHMP2A-204ENST00000597848 CST7O76096 145 aa16.93■□□□□ 0.3
CHMP2A-204ENST00000597848 P2RY1P47900 373 aa16.93■□□□□ 0.3
CHMP2A-204ENST00000597848 RAP2BP61225 183 aa16.93■□□□□ 0.3
CHMP2A-204ENST00000597848 RELQ04864 619 aaPredicted RBP16.93■□□□□ 0.3
CHMP2A-204ENST00000597848 ACOT7LQ6ZUV0 252 aa16.93■□□□□ 0.3
CHMP2A-204ENST00000597848 TMEM252Q8N6L7 170 aa16.93■□□□□ 0.3
CHMP2A-204ENST00000597848 THAP6Q8TBB0 222 aa16.93■□□□□ 0.3
CHMP2A-204ENST00000597848 IGSF23A1L1A6 192 aa16.92■□□□□ 0.3
CHMP2A-204ENST00000597848 SMCO3A2RU48 225 aa16.92■□□□□ 0.3
CHMP2A-204ENST00000597848 OR10J1P30954 320 aa16.92■□□□□ 0.3
CHMP2A-204ENST00000597848 TIGITQ495A1 244 aa16.92■□□□□ 0.3
CHMP2A-204ENST00000597848 STX12Q86Y82 276 aa16.92■□□□□ 0.3
CHMP2A-204ENST00000597848 MCRIP2Q9BUT9 160 aaKnown RBP16.92■□□□□ 0.3
CHMP2A-204ENST00000597848 SLC25A31Q9H0C2 315 aa16.92■□□□□ 0.3
CHMP2A-204ENST00000597848 MBD2Q9UBB5 411 aa16.92■□□□□ 0.3
CHMP2A-204ENST00000597848 YIF1AO95070 293 aa16.91■□□□□ 0.3
CHMP2A-204ENST00000597848 IGLL1P15814 213 aa16.91■□□□□ 0.3
CHMP2A-204ENST00000597848 SULT1A1P50225 295 aa16.91■□□□□ 0.3
CHMP2A-204ENST00000597848 AKR1C1Q04828 323 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms