RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 MED6O75586 246 aa8.43□□□□□ -1.06
LIG1-211ENST00000596457 YIF1AO95070 293 aa8.43□□□□□ -1.06
LIG1-211ENST00000596457 SCGB1D2O95969 90 aa8.43□□□□□ -1.06
LIG1-211ENST00000596457 NPY1RP25929 384 aa8.43□□□□□ -1.06
LIG1-211ENST00000596457 NPBWR1P48145 328 aa8.43□□□□□ -1.06
LIG1-211ENST00000596457 DCTN2Q13561 401 aaKnown RBP8.43□□□□□ -1.06
LIG1-211ENST00000596457 TM4SF20Q53R12 229 aa8.43□□□□□ -1.06
LIG1-211ENST00000596457 C2orf83Q53S99 150 aa8.43□□□□□ -1.06
LIG1-211ENST00000596457 SPSB3Q6PJ21 355 aa8.43□□□□□ -1.06
LIG1-211ENST00000596457 UNQ9165/PRO28630Q6UXU0 137 aa8.43□□□□□ -1.06
LIG1-211ENST00000596457 TXN2Q99757 166 aa8.43□□□□□ -1.06
LIG1-211ENST00000596457 PALMDQ9NP74 551 aa8.43□□□□□ -1.06
LIG1-211ENST00000596457 GAR1Q9NY12 217 aaKnown RBP8.43□□□□□ -1.06
LIG1-211ENST00000596457 NOTCH3Q9UM47 2321 aa8.42□□□□□ -1.06
LIG1-211ENST00000596457 RPS10-NUDT3A0A1W2PQS6 291 aa8.42□□□□□ -1.06
LIG1-211ENST00000596457 LGALS9O00182 355 aa8.42□□□□□ -1.06
LIG1-211ENST00000596457 CCSO14618 274 aa8.42□□□□□ -1.06
LIG1-211ENST00000596457 PITX3O75364 302 aa8.42□□□□□ -1.06
LIG1-211ENST00000596457 IGLV1-51P01701 117 aa8.42□□□□□ -1.06
LIG1-211ENST00000596457 IFNA4P05014 189 aa8.42□□□□□ -1.06
LIG1-211ENST00000596457 CTSGP08311 255 aa8.42□□□□□ -1.06
LIG1-211ENST00000596457 SLC25A6P12236 298 aa8.42□□□□□ -1.06
LIG1-211ENST00000596457 FOLR2P14207 255 aa8.42□□□□□ -1.06
LIG1-211ENST00000596457 GP9P14770 177 aa8.42□□□□□ -1.06
LIG1-211ENST00000596457 ADMP35318 185 aa8.42□□□□□ -1.06
LIG1-211ENST00000596457 DEFA1P59665 94 aa8.42□□□□□ -1.06
LIG1-211ENST00000596457 DEFA3P59666 94 aa8.42□□□□□ -1.06
LIG1-211ENST00000596457 BSXQ3C1V8 233 aa8.42□□□□□ -1.06
LIG1-211ENST00000596457 NOXA1Q86UR1 476 aa8.42□□□□□ -1.06
LIG1-211ENST00000596457 C12orf45Q8N5I9 185 aaPredicted RBP8.42□□□□□ -1.06
LIG1-211ENST00000596457 ZNF431Q8TF32 576 aaPredicted RBP8.42□□□□□ -1.06
LIG1-211ENST00000596457 ZNF436Q9C0F3 470 aaPredicted RBP8.42□□□□□ -1.06
LIG1-211ENST00000596457 FNDC4Q9H6D8 234 aaPredicted RBP8.42□□□□□ -1.06
LIG1-211ENST00000596457 GSKIPQ9P0R6 139 aa8.42□□□□□ -1.06
LIG1-211ENST00000596457 UFC1Q9Y3C8 167 aa8.42□□□□□ -1.06
LIG1-211ENST00000596457 U3KQ87 197 aa8.42□□□□□ -1.06
LIG1-211ENST00000596457 IZUMO1RA6ND01 250 aa8.41□□□□□ -1.06
LIG1-211ENST00000596457 C5orf51A6NDU8 294 aa8.41□□□□□ -1.06
LIG1-211ENST00000596457 NDUFA4O00483 81 aa8.41□□□□□ -1.06
LIG1-211ENST00000596457 SYNGR2O43760 224 aa8.41□□□□□ -1.06
LIG1-211ENST00000596457 TMEM50AO95807 157 aa8.41□□□□□ -1.06
LIG1-211ENST00000596457 CBLN1P23435 193 aa8.41□□□□□ -1.06
LIG1-211ENST00000596457 RELQ04864 619 aaPredicted RBP8.41□□□□□ -1.06
LIG1-211ENST00000596457 IAH1Q2TAA2 248 aaPredicted RBP8.41□□□□□ -1.06
LIG1-211ENST00000596457 ADAMTSL5Q6ZMM2 481 aa8.41□□□□□ -1.06
LIG1-211ENST00000596457 NRARPQ7Z6K4 114 aa8.41□□□□□ -1.06
LIG1-211ENST00000596457 MITD1Q8WV92 249 aa8.41□□□□□ -1.06
LIG1-211ENST00000596457 TMEM170AQ8WVE7 144 aa8.41□□□□□ -1.06
LIG1-211ENST00000596457 OR10C1Q96KK4 312 aa8.41□□□□□ -1.06
LIG1-211ENST00000596457 MRPL36Q9P0J6 103 aaKnown RBP8.41□□□□□ -1.06
LIG1-211ENST00000596457 IGHV3-49A0A0A0MS15 119 aa8.4□□□□□ -1.06
LIG1-211ENST00000596457 TMEM213A2RRL7 107 aa8.4□□□□□ -1.06
LIG1-211ENST00000596457 FAM90A26D6RGX4 464 aa8.4□□□□□ -1.06
LIG1-211ENST00000596457 NKX2-1P43699 371 aaPredicted RBP8.4□□□□□ -1.06
LIG1-211ENST00000596457 RND2P52198 227 aa8.4□□□□□ -1.06
LIG1-211ENST00000596457 POLR2GP62487 172 aaKnown RBP eCLIP8.4□□□□□ -1.06
LIG1-211ENST00000596457 RAB11AP62491 216 aa8.4□□□□□ -1.06
LIG1-211ENST00000596457 RPP30P78346 268 aaKnown RBP8.4□□□□□ -1.06
LIG1-211ENST00000596457 GUCA2BQ16661 112 aa8.4□□□□□ -1.06
LIG1-211ENST00000596457 DEFB114Q30KQ6 69 aa8.4□□□□□ -1.06
LIG1-211ENST00000596457 TIGITQ495A1 244 aa8.4□□□□□ -1.06
LIG1-211ENST00000596457 CD300EQ496F6 205 aaPredicted RBP8.4□□□□□ -1.06
LIG1-211ENST00000596457 SPANXN5Q5MJ07 72 aa8.4□□□□□ -1.06
LIG1-211ENST00000596457 PVRIGQ6DKI7 326 aa8.4□□□□□ -1.06
LIG1-211ENST00000596457 ETFRF1Q6IPR1 90 aa8.4□□□□□ -1.06
LIG1-211ENST00000596457 LCN12Q6JVE5 192 aa8.4□□□□□ -1.06
LIG1-211ENST00000596457 ZBTB8BQ8NAP8 495 aaPredicted RBP8.4□□□□□ -1.06
LIG1-211ENST00000596457 RNASEH2CQ8TDP1 164 aaKnown RBP8.4□□□□□ -1.06
LIG1-211ENST00000596457 TMEM190Q8WZ59 177 aa8.4□□□□□ -1.06
LIG1-211ENST00000596457 ACY3Q96HD9 319 aa8.4□□□□□ -1.06
LIG1-211ENST00000596457 ATP6V0BQ99437 205 aa8.4□□□□□ -1.06
LIG1-211ENST00000596457 INMT-MINDY4F8WBC2 141 aa8.39□□□□□ -1.07
LIG1-211ENST00000596457 H3BP45 60 aa8.39□□□□□ -1.07
LIG1-211ENST00000596457 SSSCA1O60232 199 aa8.39□□□□□ -1.07
LIG1-211ENST00000596457 CLN5O75503 358 aa8.39□□□□□ -1.07
LIG1-211ENST00000596457 SCGB2A1O75556 95 aa8.39□□□□□ -1.07
LIG1-211ENST00000596457 SLC25A4P12235 298 aa8.39□□□□□ -1.07
LIG1-211ENST00000596457 FCGR2BP31994 310 aaPredicted RBP8.39□□□□□ -1.07
LIG1-211ENST00000596457 PRSS54Q6PEW0 395 aa8.39□□□□□ -1.07
LIG1-211ENST00000596457 BTNL8Q6UX41 500 aa8.39□□□□□ -1.07
LIG1-211ENST00000596457 ZNF600Q6ZNG1 722 aa8.39□□□□□ -1.07
LIG1-211ENST00000596457 OR4D5Q8NGN0 318 aa8.39□□□□□ -1.07
LIG1-211ENST00000596457 OR4X1Q8NH49 305 aa8.39□□□□□ -1.07
LIG1-211ENST00000596457 NPIPB3Q92617 1050 aa8.39□□□□□ -1.07
LIG1-211ENST00000596457 CIB3Q96Q77 187 aaPredicted RBP8.39□□□□□ -1.07
LIG1-211ENST00000596457 GPN1Q9HCN4 374 aaPredicted RBP8.39□□□□□ -1.07
LIG1-211ENST00000596457 SIGLEC8Q9NYZ4 499 aa8.39□□□□□ -1.07
LIG1-211ENST00000596457 PSENENQ9NZ42 101 aa8.39□□□□□ -1.07
LIG1-211ENST00000596457 MRPL27Q9P0M9 148 aaKnown RBP8.39□□□□□ -1.07
LIG1-211ENST00000596457 MLXQ9UH92 298 aa8.39□□□□□ -1.07
LIG1-211ENST00000596457 IGHV3OR16-13A0A075B7E8 117 aa8.38□□□□□ -1.07
LIG1-211ENST00000596457 TRAV30A0A087WSZ9 112 aa8.38□□□□□ -1.07
LIG1-211ENST00000596457 IGHV3-74A0A0B4J1X5 117 aa8.38□□□□□ -1.07
LIG1-211ENST00000596457 C15orf62A8K5M9 175 aa8.38□□□□□ -1.07
LIG1-211ENST00000596457 A8MWP6 167 aa8.38□□□□□ -1.07
LIG1-211ENST00000596457 SCAF4O95104 1147 aaKnown RBP8.38□□□□□ -1.07
LIG1-211ENST00000596457 IL5P05113 134 aa8.38□□□□□ -1.07
LIG1-211ENST00000596457 OR10J1P30954 320 aa8.38□□□□□ -1.07
LIG1-211ENST00000596457 ELLP55199 621 aaPredicted RBP8.38□□□□□ -1.07
LIG1-211ENST00000596457 ID3Q02535 119 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms