RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 SPP1P10451 314 aa11.52□□□□□ -0.57
SHKBP1-211ENST00000595945 ATP6V0CP27449 155 aa11.52□□□□□ -0.57
SHKBP1-211ENST00000595945 OPRK1P41145 380 aa11.52□□□□□ -0.57
SHKBP1-211ENST00000595945 CENPVQ7Z7K6 275 aaPredicted RBP11.52□□□□□ -0.57
SHKBP1-211ENST00000595945 THAP8Q8NA92 274 aa11.52□□□□□ -0.57
SHKBP1-211ENST00000595945 TMEM116Q8NCL8 245 aa11.52□□□□□ -0.57
SHKBP1-211ENST00000595945 SCGB1C1Q8TD33 95 aa11.52□□□□□ -0.57
SHKBP1-211ENST00000595945 SLC35E1Q96K37 410 aa11.52□□□□□ -0.57
SHKBP1-211ENST00000595945 SH3BGRL3Q9H299 93 aa11.52□□□□□ -0.57
SHKBP1-211ENST00000595945 PLA2G2EQ9NZK7 142 aa11.52□□□□□ -0.57
SHKBP1-211ENST00000595945 JMJD1CQ15652 2540 aa11.52□□□□□ -0.57
SHKBP1-211ENST00000595945 IGKV1OR2-108A0A075B7D4 117 aa11.51□□□□□ -0.57
SHKBP1-211ENST00000595945 SMCO3A2RU48 225 aa11.51□□□□□ -0.57
SHKBP1-211ENST00000595945 FAM181BA6NEQ2 426 aa11.51□□□□□ -0.57
SHKBP1-211ENST00000595945 CYB5BO43169 146 aa11.51□□□□□ -0.57
SHKBP1-211ENST00000595945 MPDU1O75352 247 aa11.51□□□□□ -0.57
SHKBP1-211ENST00000595945 NDUFB8O95169 186 aa11.51□□□□□ -0.57
SHKBP1-211ENST00000595945 IFNA7P01567 189 aa11.51□□□□□ -0.57
SHKBP1-211ENST00000595945 IGLV1-40P01703 118 aa11.51□□□□□ -0.57
SHKBP1-211ENST00000595945 FGF7P21781 194 aa11.51□□□□□ -0.57
SHKBP1-211ENST00000595945 RUNX1Q01196 453 aa11.51□□□□□ -0.57
SHKBP1-211ENST00000595945 BTNL8Q6UX41 500 aa11.51□□□□□ -0.57
SHKBP1-211ENST00000595945 Q6ZSV7 163 aa11.51□□□□□ -0.57
SHKBP1-211ENST00000595945 ZNF767PQ75MW2 155 aa11.51□□□□□ -0.57
SHKBP1-211ENST00000595945 GNPNAT1Q96EK6 184 aaPredicted RBP11.51□□□□□ -0.57
SHKBP1-211ENST00000595945 JMJD8Q96S16 334 aa11.51□□□□□ -0.57
SHKBP1-211ENST00000595945 PSMG3Q9BT73 122 aaPredicted RBP11.51□□□□□ -0.57
SHKBP1-211ENST00000595945 FBXL7Q9UJT9 491 aa11.51□□□□□ -0.57
SHKBP1-211ENST00000595945 TIMM9Q9Y5J7 89 aa11.51□□□□□ -0.57
SHKBP1-211ENST00000595945 RFNGQ9Y644 331 aa11.51□□□□□ -0.57
SHKBP1-211ENST00000595945 OR2J3O76001 311 aa11.5□□□□□ -0.57
SHKBP1-211ENST00000595945 IGHV3-48P01763 117 aa11.5□□□□□ -0.57
SHKBP1-211ENST00000595945 RND2P52198 227 aa11.5□□□□□ -0.57
SHKBP1-211ENST00000595945 AKR1C1Q04828 323 aa11.5□□□□□ -0.57
SHKBP1-211ENST00000595945 ALKAL2Q6UX46 152 aa11.5□□□□□ -0.57
SHKBP1-211ENST00000595945 OR2G3Q8NGZ4 309 aa11.5□□□□□ -0.57
SHKBP1-211ENST00000595945 OR4X1Q8NH49 305 aa11.5□□□□□ -0.57
SHKBP1-211ENST00000595945 VN1R17PQ8TDU5 208 aa11.5□□□□□ -0.57
SHKBP1-211ENST00000595945 SCARB1Q8WTV0 552 aa11.5□□□□□ -0.57
SHKBP1-211ENST00000595945 TMED6Q8WW62 240 aa11.5□□□□□ -0.57
SHKBP1-211ENST00000595945 MGST2Q99735 147 aa11.5□□□□□ -0.57
SHKBP1-211ENST00000595945 RSG1Q9BU20 258 aa11.5□□□□□ -0.57
SHKBP1-211ENST00000595945 NPCDR1Q9BY65 106 aa11.5□□□□□ -0.57
SHKBP1-211ENST00000595945 SERTAD4Q9NUC0 356 aa11.5□□□□□ -0.57
SHKBP1-211ENST00000595945 THYN1Q9P016 225 aa11.5□□□□□ -0.57
SHKBP1-211ENST00000595945 NIPBLQ6KC79 2804 aaeCLIP11.5□□□□□ -0.57
SHKBP1-211ENST00000595945 IGKV1D-37A0A075B6S9 117 aa11.49□□□□□ -0.57
SHKBP1-211ENST00000595945 IGHV3-21A0A0B4J1V1 117 aa11.49□□□□□ -0.57
SHKBP1-211ENST00000595945 TMEM89A2RUT3 159 aa11.49□□□□□ -0.57
SHKBP1-211ENST00000595945 MFSD2BA6NFX1 497 aa11.49□□□□□ -0.57
SHKBP1-211ENST00000595945 FCGR2BP31994 310 aaPredicted RBP11.49□□□□□ -0.57
SHKBP1-211ENST00000595945 RHOGP84095 191 aa11.49□□□□□ -0.57
SHKBP1-211ENST00000595945 EIF5AL1Q6IS14 154 aaKnown RBP11.49□□□□□ -0.57
SHKBP1-211ENST00000595945 TEPPQ6URK8 271 aa11.49□□□□□ -0.57
SHKBP1-211ENST00000595945 NECAP1Q8NC96 275 aa11.49□□□□□ -0.57
SHKBP1-211ENST00000595945 NPIPB3Q92617 1050 aa11.49□□□□□ -0.57
SHKBP1-211ENST00000595945 ACY3Q96HD9 319 aa11.49□□□□□ -0.57
SHKBP1-211ENST00000595945 GGTLC1Q9BX51 225 aa11.49□□□□□ -0.57
SHKBP1-211ENST00000595945 SLC25A32Q9H2D1 315 aa11.49□□□□□ -0.57
SHKBP1-211ENST00000595945 UBQLN2Q9UHD9 624 aa11.49□□□□□ -0.57
SHKBP1-211ENST00000595945 F8W735 103 aaPredicted RBP11.48□□□□□ -0.57
SHKBP1-211ENST00000595945 AGPAT2O15120 278 aa11.48□□□□□ -0.57
SHKBP1-211ENST00000595945 IGHG4P01861 327 aa11.48□□□□□ -0.57
SHKBP1-211ENST00000595945 ZNF502Q8TBZ5 544 aa11.48□□□□□ -0.57
SHKBP1-211ENST00000595945 C16orf95Q9H693 158 aa11.48□□□□□ -0.57
SHKBP1-211ENST00000595945 C21orf62Q9NYP8 219 aa11.48□□□□□ -0.57
SHKBP1-211ENST00000595945 SLC45A2Q9UMX9 530 aa11.48□□□□□ -0.57
SHKBP1-211ENST00000595945 FAM223BA6NKX1 122 aa11.47□□□□□ -0.57
SHKBP1-211ENST00000595945 CLN5O75503 358 aa11.47□□□□□ -0.57
SHKBP1-211ENST00000595945 OR10J1P30954 320 aa11.47□□□□□ -0.57
SHKBP1-211ENST00000595945 RPL29P47914 159 aaKnown RBP11.47□□□□□ -0.57
SHKBP1-211ENST00000595945 CAMLGP49069 296 aa11.47□□□□□ -0.57
SHKBP1-211ENST00000595945 SULT1A2P50226 295 aa11.47□□□□□ -0.57
SHKBP1-211ENST00000595945 MFAP4P55083 255 aa11.47□□□□□ -0.57
SHKBP1-211ENST00000595945 SERF2P84101 59 aa11.47□□□□□ -0.57
SHKBP1-211ENST00000595945 DEFA5Q01523 94 aa11.47□□□□□ -0.57
SHKBP1-211ENST00000595945 FAM74A1Q5RGS3 127 aa11.47□□□□□ -0.57
SHKBP1-211ENST00000595945 ACSM6Q6P461 480 aa11.47□□□□□ -0.57
SHKBP1-211ENST00000595945 FAM223AQ8IWN6 122 aa11.47□□□□□ -0.57
SHKBP1-211ENST00000595945 MS4A10Q96PG2 267 aa11.47□□□□□ -0.57
SHKBP1-211ENST00000595945 TRGV9Q99603 122 aa11.47□□□□□ -0.57
SHKBP1-211ENST00000595945 TXN2Q99757 166 aa11.47□□□□□ -0.57
SHKBP1-211ENST00000595945 ZNF355PQ9NSJ1 428 aa11.47□□□□□ -0.57
SHKBP1-211ENST00000595945 C17orf112F2Z3M2 114 aa11.46□□□□□ -0.57
SHKBP1-211ENST00000595945 TCF21O43680 179 aa11.46□□□□□ -0.57
SHKBP1-211ENST00000595945 NDUFA7O95182 113 aa11.46□□□□□ -0.57
SHKBP1-211ENST00000595945 TRGV3P03979 118 aa11.46□□□□□ -0.57
SHKBP1-211ENST00000595945 LINC00869P0C866 280 aa11.46□□□□□ -0.57
SHKBP1-211ENST00000595945 IGLC1P0CG04 106 aa11.46□□□□□ -0.57
SHKBP1-211ENST00000595945 PSMB8P28062 276 aa11.46□□□□□ -0.57
SHKBP1-211ENST00000595945 PRR20EP86478 221 aa11.46□□□□□ -0.57
SHKBP1-211ENST00000595945 PRR20CP86479 221 aa11.46□□□□□ -0.57
SHKBP1-211ENST00000595945 PRR20DP86480 221 aa11.46□□□□□ -0.57
SHKBP1-211ENST00000595945 PRR20BP86481 221 aa11.46□□□□□ -0.57
SHKBP1-211ENST00000595945 PRR20AP86496 221 aa11.46□□□□□ -0.57
SHKBP1-211ENST00000595945 C15orf32Q32M92 178 aa11.46□□□□□ -0.57
SHKBP1-211ENST00000595945 RNF152Q8N8N0 203 aa11.46□□□□□ -0.57
SHKBP1-211ENST00000595945 WIPF2Q8TF74 440 aaPredicted RBP11.46□□□□□ -0.57
SHKBP1-211ENST00000595945 CXorf58Q96LI9 332 aa11.46□□□□□ -0.57
SHKBP1-211ENST00000595945 ATP6V0BQ99437 205 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms