RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 OR4D5Q8NGN0 318 aa10.97□□□□□ -0.65
LIG1-208ENST00000595758 CHRDL1Q9BU40 450 aa10.97□□□□□ -0.65
LIG1-208ENST00000595758 FNDC4Q9H6D8 234 aaPredicted RBP10.97□□□□□ -0.65
LIG1-208ENST00000595758 IGHV3-35A0A0C4DH35 117 aa10.96□□□□□ -0.65
LIG1-208ENST00000595758 RPS10-NUDT3A0A1W2PQS6 291 aa10.96□□□□□ -0.65
LIG1-208ENST00000595758 ZNF320A2RRD8 509 aa10.96□□□□□ -0.65
LIG1-208ENST00000595758 C5orf51A6NDU8 294 aa10.96□□□□□ -0.65
LIG1-208ENST00000595758 WRBO00258 174 aa10.96□□□□□ -0.65
LIG1-208ENST00000595758 NUPL2O15504 423 aaKnown RBP10.96□□□□□ -0.65
LIG1-208ENST00000595758 GNG7O60262 68 aa10.96□□□□□ -0.65
LIG1-208ENST00000595758 LY86O95711 162 aa10.96□□□□□ -0.65
LIG1-208ENST00000595758 PTTG1O95997 202 aa10.96□□□□□ -0.65
LIG1-208ENST00000595758 IFNA4P05014 189 aa10.96□□□□□ -0.65
LIG1-208ENST00000595758 CTSGP08311 255 aa10.96□□□□□ -0.65
LIG1-208ENST00000595758 POLR2GP62487 172 aaKnown RBP eCLIP10.96□□□□□ -0.65
LIG1-208ENST00000595758 MLANAQ16655 118 aa10.96□□□□□ -0.65
LIG1-208ENST00000595758 IL34Q6ZMJ4 242 aa10.96□□□□□ -0.65
LIG1-208ENST00000595758 PEMTQ9UBM1 199 aa10.96□□□□□ -0.65
LIG1-208ENST00000595758 LGALS9O00182 355 aa10.95□□□□□ -0.66
LIG1-208ENST00000595758 SCGB1D2O95969 90 aa10.95□□□□□ -0.66
LIG1-208ENST00000595758 ADMP35318 185 aa10.95□□□□□ -0.66
LIG1-208ENST00000595758 RPP30P78346 268 aaKnown RBP10.95□□□□□ -0.66
LIG1-208ENST00000595758 DEFA6Q01524 100 aa10.95□□□□□ -0.66
LIG1-208ENST00000595758 EGFEM1PQ0D2K5 195 aa10.95□□□□□ -0.66
LIG1-208ENST00000595758 DCTN2Q13561 401 aaKnown RBP10.95□□□□□ -0.66
LIG1-208ENST00000595758 ETFRF1Q6IPR1 90 aa10.95□□□□□ -0.66
LIG1-208ENST00000595758 GSG1LQ6UXU4 331 aa10.95□□□□□ -0.66
LIG1-208ENST00000595758 REC114Q7Z4M0 266 aa10.95□□□□□ -0.66
LIG1-208ENST00000595758 ZMAT5Q9UDW3 170 aaKnown RBP10.95□□□□□ -0.66
LIG1-208ENST00000595758 MEGF8Q7Z7M0 2845 aa10.95□□□□□ -0.66
LIG1-208ENST00000595758 C15orf62A8K5M9 175 aa10.94□□□□□ -0.66
LIG1-208ENST00000595758 SSSCA1O60232 199 aa10.94□□□□□ -0.66
LIG1-208ENST00000595758 CSN3P07498 182 aa10.94□□□□□ -0.66
LIG1-208ENST00000595758 SLC25A4P12235 298 aa10.94□□□□□ -0.66
LIG1-208ENST00000595758 KRTAP10-11P60412 298 aa10.94□□□□□ -0.66
LIG1-208ENST00000595758 RAB11AP62491 216 aa10.94□□□□□ -0.66
LIG1-208ENST00000595758 OR4X1Q8NH49 305 aa10.94□□□□□ -0.66
LIG1-208ENST00000595758 C2orf50Q96LR7 162 aa10.94□□□□□ -0.66
LIG1-208ENST00000595758 ZNF436Q9C0F3 470 aaPredicted RBP10.94□□□□□ -0.66
LIG1-208ENST00000595758 MRPL36Q9P0J6 103 aaKnown RBP10.94□□□□□ -0.66
LIG1-208ENST00000595758 PAIP2BQ9ULR5 123 aaKnown RBP10.94□□□□□ -0.66
LIG1-208ENST00000595758 CLN5O75503 358 aa10.93□□□□□ -0.66
LIG1-208ENST00000595758 TMEM50AO95807 157 aa10.93□□□□□ -0.66
LIG1-208ENST00000595758 MBPP02686 304 aaPredicted RBP10.93□□□□□ -0.66
LIG1-208ENST00000595758 RELQ04864 619 aaPredicted RBP10.93□□□□□ -0.66
LIG1-208ENST00000595758 SPANXN5Q5MJ07 72 aa10.93□□□□□ -0.66
LIG1-208ENST00000595758 PRSS54Q6PEW0 395 aa10.93□□□□□ -0.66
LIG1-208ENST00000595758 UNQ9165/PRO28630Q6UXU0 137 aa10.93□□□□□ -0.66
LIG1-208ENST00000595758 SMIM8Q96KF7 97 aa10.93□□□□□ -0.66
LIG1-208ENST00000595758 RAB40CQ96S21 281 aa10.93□□□□□ -0.66
LIG1-208ENST00000595758 SIGLEC8Q9NYZ4 499 aa10.93□□□□□ -0.66
LIG1-208ENST00000595758 STRAPQ9Y3F4 350 aaKnown RBP10.93□□□□□ -0.66
LIG1-208ENST00000595758 C2orf70A6NJV1 201 aa10.92□□□□□ -0.66
LIG1-208ENST00000595758 A8MWP6 167 aa10.92□□□□□ -0.66
LIG1-208ENST00000595758 H3BP45 60 aa10.92□□□□□ -0.66
LIG1-208ENST00000595758 NDUFA4O00483 81 aa10.92□□□□□ -0.66
LIG1-208ENST00000595758 SSNA1O43805 119 aa10.92□□□□□ -0.66
LIG1-208ENST00000595758 SCGB2A1O75556 95 aa10.92□□□□□ -0.66
LIG1-208ENST00000595758 PRB2P02812 416 aaPredicted RBP10.92□□□□□ -0.66
LIG1-208ENST00000595758 GPX4P36969 197 aaPredicted RBP10.92□□□□□ -0.66
LIG1-208ENST00000595758 RND2P52198 227 aa10.92□□□□□ -0.66
LIG1-208ENST00000595758 CD69Q07108 199 aa10.92□□□□□ -0.66
LIG1-208ENST00000595758 SLC16A13Q7RTY0 426 aa10.92□□□□□ -0.66
LIG1-208ENST00000595758 TMEM190Q8WZ59 177 aa10.92□□□□□ -0.66
LIG1-208ENST00000595758 PSENENQ9NZ42 101 aa10.92□□□□□ -0.66
LIG1-208ENST00000595758 UFC1Q9Y3C8 167 aa10.92□□□□□ -0.66
LIG1-208ENST00000595758 TRAV30A0A087WSZ9 112 aa10.91□□□□□ -0.66
LIG1-208ENST00000595758 TMEM213A2RRL7 107 aa10.91□□□□□ -0.66
LIG1-208ENST00000595758 GOSR2O14653 212 aa10.91□□□□□ -0.66
LIG1-208ENST00000595758 YIF1AO95070 293 aa10.91□□□□□ -0.66
LIG1-208ENST00000595758 IGLV1-51P01701 117 aa10.91□□□□□ -0.66
LIG1-208ENST00000595758 FOLR2P14207 255 aa10.91□□□□□ -0.66
LIG1-208ENST00000595758 CBLN1P23435 193 aa10.91□□□□□ -0.66
LIG1-208ENST00000595758 ELLP55199 621 aaPredicted RBP10.91□□□□□ -0.66
LIG1-208ENST00000595758 RGS21Q2M5E4 152 aa10.91□□□□□ -0.66
LIG1-208ENST00000595758 TM4SF20Q53R12 229 aa10.91□□□□□ -0.66
LIG1-208ENST00000595758 ADAMTSL5Q6ZMM2 481 aa10.91□□□□□ -0.66
LIG1-208ENST00000595758 HAPLN4Q86UW8 402 aa10.91□□□□□ -0.66
LIG1-208ENST00000595758 TMEM116Q8NCL8 245 aa10.91□□□□□ -0.66
LIG1-208ENST00000595758 CACNG8Q8WXS5 425 aa10.91□□□□□ -0.66
LIG1-208ENST00000595758 NPIPB3Q92617 1050 aa10.91□□□□□ -0.66
LIG1-208ENST00000595758 ACY3Q96HD9 319 aa10.91□□□□□ -0.66
LIG1-208ENST00000595758 C20orf24Q9BUV8 137 aa10.91□□□□□ -0.66
LIG1-208ENST00000595758 RCL1Q9Y2P8 373 aaKnown RBP10.91□□□□□ -0.66
LIG1-208ENST00000595758 IGHV3OR16-8A0A075B7F1 116 aa10.9□□□□□ -0.66
LIG1-208ENST00000595758 C7orf66A4D0T2 115 aa10.9□□□□□ -0.66
LIG1-208ENST00000595758 SIX6O95475 246 aa10.9□□□□□ -0.66
LIG1-208ENST00000595758 PAX9P55771 341 aa10.9□□□□□ -0.66
LIG1-208ENST00000595758 TAS2R30P59541 319 aa10.9□□□□□ -0.66
LIG1-208ENST00000595758 IL15RAQ13261 267 aa10.9□□□□□ -0.66
LIG1-208ENST00000595758 ZNF600Q6ZNG1 722 aa10.9□□□□□ -0.66
LIG1-208ENST00000595758 DYNLRB2Q8TF09 96 aa10.9□□□□□ -0.66
LIG1-208ENST00000595758 MARC2Q969Z3 335 aa10.9□□□□□ -0.66
LIG1-208ENST00000595758 SLC35E1Q96K37 410 aa10.9□□□□□ -0.66
LIG1-208ENST00000595758 AURKAIP1Q9NWT8 199 aaPredicted RBP10.9□□□□□ -0.66
LIG1-208ENST00000595758 LSM5Q9Y4Y9 91 aaKnown RBP10.9□□□□□ -0.66
LIG1-208ENST00000595758 K7EMT4 169 aa10.89□□□□□ -0.67
LIG1-208ENST00000595758 K7EPK0 472 aa10.89□□□□□ -0.67
LIG1-208ENST00000595758 L7N2F9 121 aa10.89□□□□□ -0.67
LIG1-208ENST00000595758 TSC22D2O75157 780 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms