RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 IFNA10P01566 189 aa10.46□□□□□ -0.73
SHKBP1-207ENST00000595631 NPY1RP25929 384 aa10.46□□□□□ -0.73
SHKBP1-207ENST00000595631 FAM106AQ4KMX7 169 aa10.46□□□□□ -0.73
SHKBP1-207ENST00000595631 UXS1Q8NBZ7 420 aa10.46□□□□□ -0.73
SHKBP1-207ENST00000595631 ZNF436Q9C0F3 470 aaPredicted RBP10.46□□□□□ -0.73
SHKBP1-207ENST00000595631 ZNF256Q9Y2P7 627 aaPredicted RBP10.46□□□□□ -0.73
SHKBP1-207ENST00000595631 A8MWP6 167 aa10.45□□□□□ -0.74
SHKBP1-207ENST00000595631 CORTO00230 105 aa10.45□□□□□ -0.74
SHKBP1-207ENST00000595631 ZNF207O43670 478 aaKnown RBP10.45□□□□□ -0.74
SHKBP1-207ENST00000595631 GNG7O60262 68 aa10.45□□□□□ -0.74
SHKBP1-207ENST00000595631 IFNA21P01568 189 aa10.45□□□□□ -0.74
SHKBP1-207ENST00000595631 FOLR2P14207 255 aa10.45□□□□□ -0.74
SHKBP1-207ENST00000595631 FCGR2BP31994 310 aaPredicted RBP10.45□□□□□ -0.74
SHKBP1-207ENST00000595631 SPSB3Q6PJ21 355 aa10.45□□□□□ -0.74
SHKBP1-207ENST00000595631 DUSP18Q8NEJ0 188 aa10.45□□□□□ -0.74
SHKBP1-207ENST00000595631 ZNF431Q8TF32 576 aaPredicted RBP10.45□□□□□ -0.74
SHKBP1-207ENST00000595631 TMEM190Q8WZ59 177 aa10.45□□□□□ -0.74
SHKBP1-207ENST00000595631 TXN2Q99757 166 aa10.45□□□□□ -0.74
SHKBP1-207ENST00000595631 CACFD1Q9UGQ2 172 aa10.45□□□□□ -0.74
SHKBP1-207ENST00000595631 PRKDCP78527 4128 aaKnown RBP10.45□□□□□ -0.74
SHKBP1-207ENST00000595631 FAM90A26D6RGX4 464 aa10.44□□□□□ -0.74
SHKBP1-207ENST00000595631 WRBO00258 174 aa10.44□□□□□ -0.74
SHKBP1-207ENST00000595631 NUPL2O15504 423 aaKnown RBP10.44□□□□□ -0.74
SHKBP1-207ENST00000595631 SYNGR2O43760 224 aa10.44□□□□□ -0.74
SHKBP1-207ENST00000595631 CBLN1P23435 193 aa10.44□□□□□ -0.74
SHKBP1-207ENST00000595631 C12orf45Q8N5I9 185 aaPredicted RBP10.44□□□□□ -0.74
SHKBP1-207ENST00000595631 OR4D5Q8NGN0 318 aa10.44□□□□□ -0.74
SHKBP1-207ENST00000595631 ATP6V0BQ99437 205 aa10.44□□□□□ -0.74
SHKBP1-207ENST00000595631 C20orf24Q9BUV8 137 aa10.44□□□□□ -0.74
SHKBP1-207ENST00000595631 SIGLEC8Q9NYZ4 499 aa10.44□□□□□ -0.74
SHKBP1-207ENST00000595631 C15orf62A8K5M9 175 aa10.43□□□□□ -0.74
SHKBP1-207ENST00000595631 H3BP45 60 aa10.43□□□□□ -0.74
SHKBP1-207ENST00000595631 NDUFA4O00483 81 aa10.43□□□□□ -0.74
SHKBP1-207ENST00000595631 TMEM50AO95807 157 aa10.43□□□□□ -0.74
SHKBP1-207ENST00000595631 SCGB1D2O95969 90 aa10.43□□□□□ -0.74
SHKBP1-207ENST00000595631 GP9P14770 177 aa10.43□□□□□ -0.74
SHKBP1-207ENST00000595631 DEFA1P59665 94 aa10.43□□□□□ -0.74
SHKBP1-207ENST00000595631 DEFA3P59666 94 aa10.43□□□□□ -0.74
SHKBP1-207ENST00000595631 POLR2GP62487 172 aaKnown RBP eCLIP10.43□□□□□ -0.74
SHKBP1-207ENST00000595631 IAH1Q2TAA2 248 aaPredicted RBP10.43□□□□□ -0.74
SHKBP1-207ENST00000595631 CD300EQ496F6 205 aaPredicted RBP10.43□□□□□ -0.74
SHKBP1-207ENST00000595631 DEFB121Q5J5C9 76 aa10.43□□□□□ -0.74
SHKBP1-207ENST00000595631 PRSS54Q6PEW0 395 aa10.43□□□□□ -0.74
SHKBP1-207ENST00000595631 ZBTB8BQ8NAP8 495 aaPredicted RBP10.43□□□□□ -0.74
SHKBP1-207ENST00000595631 RNASEH2CQ8TDP1 164 aaKnown RBP10.43□□□□□ -0.74
SHKBP1-207ENST00000595631 DYNLRB2Q8TF09 96 aa10.43□□□□□ -0.74
SHKBP1-207ENST00000595631 GAR1Q9NY12 217 aaKnown RBP10.43□□□□□ -0.74
SHKBP1-207ENST00000595631 MLXQ9UH92 298 aa10.43□□□□□ -0.74
SHKBP1-207ENST00000595631 PAIP2BQ9ULR5 123 aaKnown RBP10.43□□□□□ -0.74
SHKBP1-207ENST00000595631 U3KQ87 197 aa10.43□□□□□ -0.74
SHKBP1-207ENST00000595631 RPS10-NUDT3A0A1W2PQS6 291 aa10.42□□□□□ -0.74
SHKBP1-207ENST00000595631 FAM25EA8MYX2 175 aa10.42□□□□□ -0.74
SHKBP1-207ENST00000595631 CLN5O75503 358 aa10.42□□□□□ -0.74
SHKBP1-207ENST00000595631 MED6O75586 246 aa10.42□□□□□ -0.74
SHKBP1-207ENST00000595631 IL5P05113 134 aa10.42□□□□□ -0.74
SHKBP1-207ENST00000595631 NKX2-1P43699 371 aaPredicted RBP10.42□□□□□ -0.74
SHKBP1-207ENST00000595631 NPBWR1P48145 328 aa10.42□□□□□ -0.74
SHKBP1-207ENST00000595631 RND2P52198 227 aa10.42□□□□□ -0.74
SHKBP1-207ENST00000595631 ID3Q02535 119 aa10.42□□□□□ -0.74
SHKBP1-207ENST00000595631 DEFB114Q30KQ6 69 aa10.42□□□□□ -0.74
SHKBP1-207ENST00000595631 TIGITQ495A1 244 aa10.42□□□□□ -0.74
SHKBP1-207ENST00000595631 BTNL8Q6UX41 500 aa10.42□□□□□ -0.74
SHKBP1-207ENST00000595631 SLC16A13Q7RTY0 426 aa10.42□□□□□ -0.74
SHKBP1-207ENST00000595631 OR4X1Q8NH49 305 aa10.42□□□□□ -0.74
SHKBP1-207ENST00000595631 ACY3Q96HD9 319 aa10.42□□□□□ -0.74
SHKBP1-207ENST00000595631 PALMDQ9NP74 551 aa10.42□□□□□ -0.74
SHKBP1-207ENST00000595631 GSKIPQ9P0R6 139 aa10.42□□□□□ -0.74
SHKBP1-207ENST00000595631 ZMAT5Q9UDW3 170 aaKnown RBP10.42□□□□□ -0.74
SHKBP1-207ENST00000595631 UFC1Q9Y3C8 167 aa10.42□□□□□ -0.74
SHKBP1-207ENST00000595631 IGHV3-49A0A0A0MS15 119 aa10.41□□□□□ -0.74
SHKBP1-207ENST00000595631 INMT-MINDY4F8WBC2 141 aa10.41□□□□□ -0.74
SHKBP1-207ENST00000595631 SSSCA1O60232 199 aa10.41□□□□□ -0.74
SHKBP1-207ENST00000595631 YIF1AO95070 293 aa10.41□□□□□ -0.74
SHKBP1-207ENST00000595631 IFNA4P05014 189 aa10.41□□□□□ -0.74
SHKBP1-207ENST00000595631 RELQ04864 619 aaPredicted RBP10.41□□□□□ -0.74
SHKBP1-207ENST00000595631 CD69Q07108 199 aa10.41□□□□□ -0.74
SHKBP1-207ENST00000595631 SPANXN5Q5MJ07 72 aa10.41□□□□□ -0.74
SHKBP1-207ENST00000595631 LSM4Q9Y4Z0 139 aaKnown RBP10.41□□□□□ -0.74
SHKBP1-207ENST00000595631 C5orf51A6NDU8 294 aa10.4□□□□□ -0.74
SHKBP1-207ENST00000595631 IGKV1-17P01599 117 aa10.4□□□□□ -0.74
SHKBP1-207ENST00000595631 C8orf88P0DMB2 117 aa10.4□□□□□ -0.74
SHKBP1-207ENST00000595631 ELLP55199 621 aaPredicted RBP10.4□□□□□ -0.74
SHKBP1-207ENST00000595631 LCN12Q6JVE5 192 aa10.4□□□□□ -0.74
SHKBP1-207ENST00000595631 TOMM20LQ6UXN7 152 aa10.4□□□□□ -0.74
SHKBP1-207ENST00000595631 NOXA1Q86UR1 476 aa10.4□□□□□ -0.74
SHKBP1-207ENST00000595631 NPIPB3Q92617 1050 aa10.4□□□□□ -0.74
SHKBP1-207ENST00000595631 WDR89Q96FK6 387 aaPredicted RBP10.4□□□□□ -0.74
SHKBP1-207ENST00000595631 CIB3Q96Q77 187 aaPredicted RBP10.4□□□□□ -0.74
SHKBP1-207ENST00000595631 MARVELD1Q9BSK0 173 aa10.4□□□□□ -0.74
SHKBP1-207ENST00000595631 ZFAND3Q9H8U3 227 aa10.4□□□□□ -0.74
SHKBP1-207ENST00000595631 DAZ1Q9NQZ3 744 aaKnown RBP10.4□□□□□ -0.74
SHKBP1-207ENST00000595631 RCL1Q9Y2P8 373 aaKnown RBP10.4□□□□□ -0.74
SHKBP1-207ENST00000595631 PUS1Q9Y606 427 aaKnown RBP eCLIP10.4□□□□□ -0.74
SHKBP1-207ENST00000595631 IGHV3OR16-13A0A075B7E8 117 aa10.39□□□□□ -0.75
SHKBP1-207ENST00000595631 IGHV3-74A0A0B4J1X5 117 aa10.39□□□□□ -0.75
SHKBP1-207ENST00000595631 ZNF785A8K8V0 405 aa10.39□□□□□ -0.75
SHKBP1-207ENST00000595631 CCNKO75909 580 aa10.39□□□□□ -0.75
SHKBP1-207ENST00000595631 MBPP02686 304 aaPredicted RBP10.39□□□□□ -0.75
SHKBP1-207ENST00000595631 IGLC1P0CG04 106 aa10.39□□□□□ -0.75
SHKBP1-207ENST00000595631 SLC25A4P12235 298 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms