RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 CD7P09564 240 aa8.25□□□□□ -1.09
SHKBP1-206ENST00000595523 NHLRC4P0CG21 123 aaPredicted RBP8.25□□□□□ -1.09
SHKBP1-206ENST00000595523 HTR2BP41595 481 aa8.25□□□□□ -1.09
SHKBP1-206ENST00000595523 INPP1P49441 399 aa8.25□□□□□ -1.09
SHKBP1-206ENST00000595523 SUB1P53999 127 aaKnown RBP eCLIP8.25□□□□□ -1.09
SHKBP1-206ENST00000595523 CNPY1Q3B7I2 92 aa8.25□□□□□ -1.09
SHKBP1-206ENST00000595523 C2orf83Q53S99 150 aa8.25□□□□□ -1.09
SHKBP1-206ENST00000595523 SLC24A4Q8NFF2 622 aa8.25□□□□□ -1.09
SHKBP1-206ENST00000595523 OR10C1Q96KK4 312 aa8.25□□□□□ -1.09
SHKBP1-206ENST00000595523 C20orf24Q9BUV8 137 aa8.25□□□□□ -1.09
SHKBP1-206ENST00000595523 WFDC10AQ9H1F0 79 aa8.25□□□□□ -1.09
SHKBP1-206ENST00000595523 HEYLQ9NQ87 328 aaPredicted RBP8.25□□□□□ -1.09
SHKBP1-206ENST00000595523 GAR1Q9NY12 217 aaKnown RBP8.25□□□□□ -1.09
SHKBP1-206ENST00000595523 MRPL27Q9P0M9 148 aaKnown RBP8.25□□□□□ -1.09
SHKBP1-206ENST00000595523 CSMD3Q7Z407 3707 aa8.25□□□□□ -1.09
SHKBP1-206ENST00000595523 KMT2CQ8NEZ4 4911 aaKnown RBP8.25□□□□□ -1.09
SHKBP1-206ENST00000595523 A0A1B0GU03 582 aa8.24□□□□□ -1.09
SHKBP1-206ENST00000595523 DUXBA0A1W2PPF3 345 aa8.24□□□□□ -1.09
SHKBP1-206ENST00000595523 C9orf170A2RU37 121 aa8.24□□□□□ -1.09
SHKBP1-206ENST00000595523 C15orf62A8K5M9 175 aa8.24□□□□□ -1.09
SHKBP1-206ENST00000595523 K7EMT4 169 aa8.24□□□□□ -1.09
SHKBP1-206ENST00000595523 SCAF4O95104 1147 aaKnown RBP8.24□□□□□ -1.09
SHKBP1-206ENST00000595523 TMEM50AO95807 157 aa8.24□□□□□ -1.09
SHKBP1-206ENST00000595523 OPRK1P41145 380 aa8.24□□□□□ -1.09
SHKBP1-206ENST00000595523 CD81P60033 236 aa8.24□□□□□ -1.09
SHKBP1-206ENST00000595523 UBE2MP61081 183 aaKnown RBP8.24□□□□□ -1.09
SHKBP1-206ENST00000595523 RELQ04864 619 aaPredicted RBP8.24□□□□□ -1.09
SHKBP1-206ENST00000595523 GUCA2BQ16661 112 aa8.24□□□□□ -1.09
SHKBP1-206ENST00000595523 GTSCR1Q86UQ5 136 aa8.24□□□□□ -1.09
SHKBP1-206ENST00000595523 DUSP18Q8NEJ0 188 aa8.24□□□□□ -1.09
SHKBP1-206ENST00000595523 NEURL2Q9BR09 285 aa8.24□□□□□ -1.09
SHKBP1-206ENST00000595523 C7orf50Q9BRJ6 194 aaKnown RBP8.24□□□□□ -1.09
SHKBP1-206ENST00000595523 RBKSQ9H477 322 aa8.24□□□□□ -1.09
SHKBP1-206ENST00000595523 ZFAND3Q9H8U3 227 aa8.24□□□□□ -1.09
SHKBP1-206ENST00000595523 CLN5O75503 358 aa8.23□□□□□ -1.09
SHKBP1-206ENST00000595523 NPY1RP25929 384 aa8.23□□□□□ -1.09
SHKBP1-206ENST00000595523 NPBWR1P48145 328 aa8.23□□□□□ -1.09
SHKBP1-206ENST00000595523 TOMM20LQ6UXN7 152 aa8.23□□□□□ -1.09
SHKBP1-206ENST00000595523 OR4X1Q8NH49 305 aa8.23□□□□□ -1.09
SHKBP1-206ENST00000595523 OR1S1Q8NH92 325 aa8.23□□□□□ -1.09
SHKBP1-206ENST00000595523 DTD1Q8TEA8 209 aa8.23□□□□□ -1.09
SHKBP1-206ENST00000595523 U3KQK5 164 aa8.23□□□□□ -1.09
SHKBP1-206ENST00000595523 IGHV3-49A0A0A0MS15 119 aa8.22□□□□□ -1.09
SHKBP1-206ENST00000595523 TRAV25A0A0B4J276 109 aa8.22□□□□□ -1.09
SHKBP1-206ENST00000595523 IGHV7-4-1A0A0J9YVY3 117 aa8.22□□□□□ -1.09
SHKBP1-206ENST00000595523 LYRM1O43325 122 aa8.22□□□□□ -1.09
SHKBP1-206ENST00000595523 ADAP1O75689 374 aa8.22□□□□□ -1.09
SHKBP1-206ENST00000595523 YIF1AO95070 293 aa8.22□□□□□ -1.09
SHKBP1-206ENST00000595523 IGKV1-17P01599 117 aa8.22□□□□□ -1.09
SHKBP1-206ENST00000595523 OR4E1P0C645 316 aa8.22□□□□□ -1.09
SHKBP1-206ENST00000595523 SLC25A6P12236 298 aa8.22□□□□□ -1.09
SHKBP1-206ENST00000595523 ANXA7P20073 488 aaKnown RBP8.22□□□□□ -1.09
SHKBP1-206ENST00000595523 DHRS2Q13268 280 aa8.22□□□□□ -1.09
SHKBP1-206ENST00000595523 GGNBP1Q5YKI7 109 aa8.22□□□□□ -1.09
SHKBP1-206ENST00000595523 PRSS54Q6PEW0 395 aa8.22□□□□□ -1.09
SHKBP1-206ENST00000595523 LINC00322Q6ZN03 302 aaPredicted RBP8.22□□□□□ -1.09
SHKBP1-206ENST00000595523 LINC00299Q6ZSB3 139 aa8.22□□□□□ -1.09
SHKBP1-206ENST00000595523 LYG2Q86SG7 212 aa8.22□□□□□ -1.09
SHKBP1-206ENST00000595523 DEFB125Q8N687 156 aa8.22□□□□□ -1.09
SHKBP1-206ENST00000595523 RNASEH2CQ8TDP1 164 aaKnown RBP8.22□□□□□ -1.09
SHKBP1-206ENST00000595523 HIPK2Q9H2X6 1198 aa8.22□□□□□ -1.09
SHKBP1-206ENST00000595523 CACFD1Q9UGQ2 172 aa8.22□□□□□ -1.09
SHKBP1-206ENST00000595523 SMPXQ9UHP9 88 aa8.22□□□□□ -1.09
SHKBP1-206ENST00000595523 TMED3Q9Y3Q3 217 aa8.22□□□□□ -1.09
SHKBP1-206ENST00000595523 PUS1Q9Y606 427 aaKnown RBP eCLIP8.22□□□□□ -1.09
SHKBP1-206ENST00000595523 TENM2Q9NT68 2774 aa8.21□□□□□ -1.1
SHKBP1-206ENST00000595523 IGHV3OR16-13A0A075B7E8 117 aa8.21□□□□□ -1.1
SHKBP1-206ENST00000595523 IGHV3-74A0A0B4J1X5 117 aa8.21□□□□□ -1.1
SHKBP1-206ENST00000595523 PIGBOS1A0A0B4J2F0 54 aa8.21□□□□□ -1.1
SHKBP1-206ENST00000595523 CENPXA8MT69 81 aa8.21□□□□□ -1.1
SHKBP1-206ENST00000595523 MPTX1A8MV57 137 aa8.21□□□□□ -1.1
SHKBP1-206ENST00000595523 CHEK1O14757 476 aa8.21□□□□□ -1.1
SHKBP1-206ENST00000595523 TSPAN4O14817 238 aa8.21□□□□□ -1.1
SHKBP1-206ENST00000595523 APOHP02749 345 aaPredicted RBP8.21□□□□□ -1.1
SHKBP1-206ENST00000595523 HOXB5P09067 269 aa8.21□□□□□ -1.1
SHKBP1-206ENST00000595523 IGLC1P0CG04 106 aa8.21□□□□□ -1.1
SHKBP1-206ENST00000595523 RND2P52198 227 aa8.21□□□□□ -1.1
SHKBP1-206ENST00000595523 TIGITQ495A1 244 aa8.21□□□□□ -1.1
SHKBP1-206ENST00000595523 ZNF600Q6ZNG1 722 aa8.21□□□□□ -1.1
SHKBP1-206ENST00000595523 TMEM116Q8NCL8 245 aa8.21□□□□□ -1.1
SHKBP1-206ENST00000595523 RNF2Q99496 336 aa8.21□□□□□ -1.1
SHKBP1-206ENST00000595523 TM2D3Q9BRN9 247 aa8.21□□□□□ -1.1
SHKBP1-206ENST00000595523 CCDC32Q9BV29 185 aa8.21□□□□□ -1.1
SHKBP1-206ENST00000595523 RHPN1-AS1Q9BWJ2 59 aa8.21□□□□□ -1.1
SHKBP1-206ENST00000595523 C20orf85Q9H1P6 137 aa8.21□□□□□ -1.1
SHKBP1-206ENST00000595523 U3KQ87 197 aa8.21□□□□□ -1.1
SHKBP1-206ENST00000595523 AGRNO00468 2067 aa8.21□□□□□ -1.1
SHKBP1-206ENST00000595523 STARD9Q9P2P6 4700 aa8.2□□□□□ -1.1
SHKBP1-206ENST00000595523 RPS10-NUDT3A0A1W2PQS6 291 aa8.2□□□□□ -1.1
SHKBP1-206ENST00000595523 RBMY1BA6NDE4 496 aaKnown RBP8.2□□□□□ -1.1
SHKBP1-206ENST00000595523 RBMY1EA6NEQ0 496 aaKnown RBP8.2□□□□□ -1.1
SHKBP1-206ENST00000595523 OR11H12B2RN74 326 aa8.2□□□□□ -1.1
SHKBP1-206ENST00000595523 FAM90A26D6RGX4 464 aa8.2□□□□□ -1.1
SHKBP1-206ENST00000595523 IFNA10P01566 189 aa8.2□□□□□ -1.1
SHKBP1-206ENST00000595523 RBMY1DP0C7P1 496 aaKnown RBP8.2□□□□□ -1.1
SHKBP1-206ENST00000595523 IAPPP10997 89 aa8.2□□□□□ -1.1
SHKBP1-206ENST00000595523 SLC25A4P12235 298 aa8.2□□□□□ -1.1
SHKBP1-206ENST00000595523 HAGHQ16775 308 aa8.2□□□□□ -1.1
SHKBP1-206ENST00000595523 RBPMS2Q6ZRY4 209 aaKnown RBP8.2□□□□□ -1.1
SHKBP1-206ENST00000595523 LILRB2Q8N423 598 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms