RNA–Protein interactions for RNA: ENST00000595240.5

IRF3-210, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-210ENST00000595240 GGTLC1Q9BX51 225 aa11.94□□□□□ -0.5
IRF3-210ENST00000595240 FNDC4Q9H6D8 234 aaPredicted RBP11.94□□□□□ -0.5
IRF3-210ENST00000595240 TRAV14DV4A0A0A6YYC5 116 aa11.93□□□□□ -0.5
IRF3-210ENST00000595240 CCDC160A6NGH7 325 aa11.93□□□□□ -0.5
IRF3-210ENST00000595240 SUPT4H1P63272 117 aaKnown RBP11.93□□□□□ -0.5
IRF3-210ENST00000595240 TOMM20LQ6UXN7 152 aa11.93□□□□□ -0.5
IRF3-210ENST00000595240 FAM110AQ9BQ89 295 aa11.93□□□□□ -0.5
IRF3-210ENST00000595240 PRR13Q9NZ81 148 aa11.93□□□□□ -0.5
IRF3-210ENST00000595240 MRPL36Q9P0J6 103 aaKnown RBP11.93□□□□□ -0.5
IRF3-210ENST00000595240 KCNIP3Q9Y2W7 256 aa11.93□□□□□ -0.5
IRF3-210ENST00000595240 LOC102724200A0A096LPH7 203 aaPredicted RBP11.92□□□□□ -0.5
IRF3-210ENST00000595240 IGHV3-49A0A0A0MS15 119 aa11.92□□□□□ -0.5
IRF3-210ENST00000595240 OR4C46A6NHA9 309 aa11.92□□□□□ -0.5
IRF3-210ENST00000595240 ZNF701M0R085 212 aaPredicted RBP11.92□□□□□ -0.5
IRF3-210ENST00000595240 TMEM50AO95807 157 aa11.92□□□□□ -0.5
IRF3-210ENST00000595240 FAUP35544 74 aaKnown RBP11.92□□□□□ -0.5
IRF3-210ENST00000595240 OPRK1P41145 380 aa11.92□□□□□ -0.5
IRF3-210ENST00000595240 HTR2BP41595 481 aa11.92□□□□□ -0.5
IRF3-210ENST00000595240 AP3S2P59780 193 aa11.92□□□□□ -0.5
IRF3-210ENST00000595240 ZNF79Q15937 498 aa11.92□□□□□ -0.5
IRF3-210ENST00000595240 MLANAQ16655 118 aa11.92□□□□□ -0.5
IRF3-210ENST00000595240 ODF3L2Q3SX64 289 aa11.92□□□□□ -0.5
IRF3-210ENST00000595240 PYDC2Q56P42 97 aa11.92□□□□□ -0.5
IRF3-210ENST00000595240 NMSQ5H8A3 153 aa11.92□□□□□ -0.5
IRF3-210ENST00000595240 ZNF600Q6ZNG1 722 aa11.92□□□□□ -0.5
IRF3-210ENST00000595240 OR4X1Q8NH49 305 aa11.92□□□□□ -0.5
IRF3-210ENST00000595240 ZFAND3Q9H8U3 227 aa11.92□□□□□ -0.5
IRF3-210ENST00000595240 CACFD1Q9UGQ2 172 aa11.92□□□□□ -0.5
IRF3-210ENST00000595240 CLN5O75503 358 aa11.91□□□□□ -0.5
IRF3-210ENST00000595240 AKR1C4P17516 323 aa11.91□□□□□ -0.5
IRF3-210ENST00000595240 S100A5P33763 92 aa11.91□□□□□ -0.5
IRF3-210ENST00000595240 FAM90A2PQ658T7 463 aa11.91□□□□□ -0.5
IRF3-210ENST00000595240 CCDC190Q86UF4 302 aa11.91□□□□□ -0.5
IRF3-210ENST00000595240 GINS3Q9BRX5 216 aa11.91□□□□□ -0.5
IRF3-210ENST00000595240 HEYLQ9NQ87 328 aaPredicted RBP11.91□□□□□ -0.5
IRF3-210ENST00000595240 UBQLN2Q9UHD9 624 aa11.91□□□□□ -0.5
IRF3-210ENST00000595240 PUS1Q9Y606 427 aaKnown RBP eCLIP11.91□□□□□ -0.5
IRF3-210ENST00000595240 A0A0B4J2A0 478 aa11.9□□□□□ -0.5
IRF3-210ENST00000595240 A0A1B0GU03 582 aa11.9□□□□□ -0.5
IRF3-210ENST00000595240 SULT1A3P0DMM9 295 aa11.9□□□□□ -0.5
IRF3-210ENST00000595240 SULT1A4P0DMN0 295 aa11.9□□□□□ -0.5
IRF3-210ENST00000595240 C2orf83Q53S99 150 aa11.9□□□□□ -0.5
IRF3-210ENST00000595240 ZFAND6Q6FIF0 208 aa11.9□□□□□ -0.5
IRF3-210ENST00000595240 TOMM5Q8N4H5 51 aa11.9□□□□□ -0.5
IRF3-210ENST00000595240 SLC24A4Q8NFF2 622 aa11.9□□□□□ -0.5
IRF3-210ENST00000595240 TMEM170AQ8WVE7 144 aa11.9□□□□□ -0.5
IRF3-210ENST00000595240 DEDD2Q8WXF8 326 aa11.9□□□□□ -0.5
IRF3-210ENST00000595240 VSIRQ9H7M9 311 aa11.9□□□□□ -0.5
IRF3-210ENST00000595240 SHPKQ9UHJ6 478 aa11.9□□□□□ -0.5
IRF3-210ENST00000595240 DYNC2H1Q8NCM8 4307 aaKnown RBP11.89□□□□□ -0.51
IRF3-210ENST00000595240 IGHV3OR16-13A0A075B7E8 117 aa11.89□□□□□ -0.51
IRF3-210ENST00000595240 IGHV3-74A0A0B4J1X5 117 aa11.89□□□□□ -0.51
IRF3-210ENST00000595240 RPS10-NUDT3A0A1W2PQS6 291 aa11.89□□□□□ -0.51
IRF3-210ENST00000595240 CEBPZOSA8MTT3 80 aa11.89□□□□□ -0.51
IRF3-210ENST00000595240 IGKV1-17P01599 117 aa11.89□□□□□ -0.51
IRF3-210ENST00000595240 SRPXP78539 464 aa11.89□□□□□ -0.51
IRF3-210ENST00000595240 LYZL2Q7Z4W2 148 aa11.89□□□□□ -0.51
IRF3-210ENST00000595240 RNASEH2CQ8TDP1 164 aaKnown RBP11.89□□□□□ -0.51
IRF3-210ENST00000595240 STARD9Q9P2P6 4700 aa11.88□□□□□ -0.51
IRF3-210ENST00000595240 NXPH3O95157 252 aa11.88□□□□□ -0.51
IRF3-210ENST00000595240 APOHP02749 345 aaPredicted RBP11.88□□□□□ -0.51
IRF3-210ENST00000595240 CD5P06127 495 aa11.88□□□□□ -0.51
IRF3-210ENST00000595240 ANXA3P12429 323 aa11.88□□□□□ -0.51
IRF3-210ENST00000595240 BMI1P35226 326 aa11.88□□□□□ -0.51
IRF3-210ENST00000595240 CCR6P51684 374 aa11.88□□□□□ -0.51
IRF3-210ENST00000595240 TNFRSF9Q07011 255 aa11.88□□□□□ -0.51
IRF3-210ENST00000595240 SMCO1Q147U7 214 aa11.88□□□□□ -0.51
IRF3-210ENST00000595240 TMED4Q7Z7H5 227 aa11.88□□□□□ -0.51
IRF3-210ENST00000595240 LGI3Q8N145 548 aa11.88□□□□□ -0.51
IRF3-210ENST00000595240 LILRB2Q8N423 598 aa11.88□□□□□ -0.51
IRF3-210ENST00000595240 ST8SIA2Q92186 375 aa11.88□□□□□ -0.51
IRF3-210ENST00000595240 OVOL2Q9BRP0 275 aa11.88□□□□□ -0.51
IRF3-210ENST00000595240 HSPB7Q9UBY9 170 aa11.88□□□□□ -0.51
IRF3-210ENST00000595240 SCGB2A1O75556 95 aa11.87□□□□□ -0.51
IRF3-210ENST00000595240 SLC25A4P12235 298 aa11.87□□□□□ -0.51
IRF3-210ENST00000595240 NPY1RP25929 384 aa11.87□□□□□ -0.51
IRF3-210ENST00000595240 APOC4P55056 127 aa11.87□□□□□ -0.51
IRF3-210ENST00000595240 TMEM128Q5BJH2 165 aa11.87□□□□□ -0.51
IRF3-210ENST00000595240 PRSS54Q6PEW0 395 aa11.87□□□□□ -0.51
IRF3-210ENST00000595240 TCF24Q7RTU0 167 aa11.87□□□□□ -0.51
IRF3-210ENST00000595240 SLC25A21Q9BQT8 299 aaPredicted RBP11.87□□□□□ -0.51
IRF3-210ENST00000595240 CSMD3Q7Z407 3707 aa11.86□□□□□ -0.51
IRF3-210ENST00000595240 IGKV3-7A0A075B6H7 116 aa11.86□□□□□ -0.51
IRF3-210ENST00000595240 TRAV30A0A087WSZ9 112 aa11.86□□□□□ -0.51
IRF3-210ENST00000595240 PIGBOS1A0A0B4J2F0 54 aa11.86□□□□□ -0.51
IRF3-210ENST00000595240 KIR2DL5BA0A0G2JN68 375 aa11.86□□□□□ -0.51
IRF3-210ENST00000595240 KIR2DL5BA0A0G2JPC4 375 aa11.86□□□□□ -0.51
IRF3-210ENST00000595240 IGLC1P0CG04 106 aa11.86□□□□□ -0.51
IRF3-210ENST00000595240 NPPCP23582 126 aa11.86□□□□□ -0.51
IRF3-210ENST00000595240 TFPI2P48307 235 aa11.86□□□□□ -0.51
IRF3-210ENST00000595240 CMC4P56277 68 aaPredicted RBP11.86□□□□□ -0.51
IRF3-210ENST00000595240 TIGITQ495A1 244 aa11.86□□□□□ -0.51
IRF3-210ENST00000595240 SPANXN2Q5MJ10 180 aa11.86□□□□□ -0.51
IRF3-210ENST00000595240 Q6ZWC4 215 aa11.86□□□□□ -0.51
IRF3-210ENST00000595240 NOXA1Q86UR1 476 aa11.86□□□□□ -0.51
IRF3-210ENST00000595240 KIR2DL5AQ8N109 375 aa11.86□□□□□ -0.51
IRF3-210ENST00000595240 GBGT1Q8N5D6 347 aa11.86□□□□□ -0.51
IRF3-210ENST00000595240 KIR2DL5BQ8NHK3 375 aa11.86□□□□□ -0.51
IRF3-210ENST00000595240 SRRQ9GZT4 340 aa11.86□□□□□ -0.51
IRF3-210ENST00000595240 RYR2Q92736 4967 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms