RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 ZCCHC24Q8N2G6 241 aaKnown RBP12.59□□□□□ -0.39
PNKP-204ENST00000594661 ZNF808Q8N4W9 903 aaPredicted RBP12.59□□□□□ -0.39
PNKP-204ENST00000594661 DCTN5Q9BTE1 182 aa12.59□□□□□ -0.39
PNKP-204ENST00000594661 WASHC3Q9Y3C0 194 aa12.59□□□□□ -0.39
PNKP-204ENST00000594661 CACNA1AO00555 2505 aa12.59□□□□□ -0.39
PNKP-204ENST00000594661 SHISA9B4DS77 424 aa12.59□□□□□ -0.39
PNKP-204ENST00000594661 ADORA2A-AS1P86434 159 aa12.59□□□□□ -0.39
PNKP-204ENST00000594661 RELBQ01201 579 aa12.59□□□□□ -0.39
PNKP-204ENST00000594661 CDSNQ15517 529 aa12.59□□□□□ -0.39
PNKP-204ENST00000594661 COX19Q49B96 90 aa12.59□□□□□ -0.39
PNKP-204ENST00000594661 ZBTB34Q8NCN2 500 aa12.59□□□□□ -0.39
PNKP-204ENST00000594661 ZNRF1Q8ND25 227 aa12.59□□□□□ -0.39
PNKP-204ENST00000594661 RFESDQ8TAC1 157 aa12.59□□□□□ -0.39
PNKP-204ENST00000594661 QTRT1Q9BXR0 403 aaKnown RBP12.59□□□□□ -0.39
PNKP-204ENST00000594661 RNF7Q9UBF6 113 aa12.59□□□□□ -0.39
PNKP-204ENST00000594661 MUC21A0A0G2JKD1 596 aa12.58□□□□□ -0.4
PNKP-204ENST00000594661 MUC21A0A140T8X8 626 aa12.58□□□□□ -0.4
PNKP-204ENST00000594661 NUDT3O95989 172 aa12.58□□□□□ -0.4
PNKP-204ENST00000594661 LINC00869P0C866 280 aa12.58□□□□□ -0.4
PNKP-204ENST00000594661 IAPPP10997 89 aa12.58□□□□□ -0.4
PNKP-204ENST00000594661 CCL8P80075 99 aa12.58□□□□□ -0.4
PNKP-204ENST00000594661 SCGB2A2Q13296 93 aa12.58□□□□□ -0.4
PNKP-204ENST00000594661 MUC21Q5SSG8 566 aa12.58□□□□□ -0.4
PNKP-204ENST00000594661 NEGR1Q7Z3B1 354 aa12.58□□□□□ -0.4
PNKP-204ENST00000594661 C5orf17Q8NAS9 161 aa12.58□□□□□ -0.4
PNKP-204ENST00000594661 PLPPR2Q96GM1 343 aa12.58□□□□□ -0.4
PNKP-204ENST00000594661 ST20Q9HBF5 79 aa12.58□□□□□ -0.4
PNKP-204ENST00000594661 NGBQ9NPG2 151 aa12.58□□□□□ -0.4
PNKP-204ENST00000594661 DIDO1Q9BTC0 2240 aaKnown RBP12.58□□□□□ -0.4
PNKP-204ENST00000594661 ROS1P08922 2347 aa12.58□□□□□ -0.4
PNKP-204ENST00000594661 IGHV3-43A0A0B4J1X8 118 aa12.58□□□□□ -0.4
PNKP-204ENST00000594661 FRMD6-AS1P0C7T7 363 aa12.58□□□□□ -0.4
PNKP-204ENST00000594661 IGHV3-43DP0DP04 118 aa12.58□□□□□ -0.4
PNKP-204ENST00000594661 OR8B3Q8NGG8 313 aa12.58□□□□□ -0.4
PNKP-204ENST00000594661 OR1N2Q8NGR9 330 aa12.58□□□□□ -0.4
PNKP-204ENST00000594661 LINC01560Q8TB33 94 aa12.58□□□□□ -0.4
PNKP-204ENST00000594661 FAM222BQ8WU58 562 aa12.58□□□□□ -0.4
PNKP-204ENST00000594661 C5orf30Q96GV9 206 aa12.58□□□□□ -0.4
PNKP-204ENST00000594661 OR8B2Q96RD0 313 aa12.58□□□□□ -0.4
PNKP-204ENST00000594661 TXNDC17Q9BRA2 123 aa12.58□□□□□ -0.4
PNKP-204ENST00000594661 OR51B2Q9Y5P1 312 aa12.58□□□□□ -0.4
PNKP-204ENST00000594661 C17orf100A8MU93 164 aa12.57□□□□□ -0.4
PNKP-204ENST00000594661 C22orf46C9J442 243 aa12.57□□□□□ -0.4
PNKP-204ENST00000594661 SPINT2O43291 252 aa12.57□□□□□ -0.4
PNKP-204ENST00000594661 ATP5G3P48201 142 aa12.57□□□□□ -0.4
PNKP-204ENST00000594661 RPEL1Q2QD12 228 aa12.57□□□□□ -0.4
PNKP-204ENST00000594661 FBXL19-AS1Q494R0 122 aa12.57□□□□□ -0.4
PNKP-204ENST00000594661 DUX4L9Q6RFH8 374 aaPredicted RBP12.57□□□□□ -0.4
PNKP-204ENST00000594661 FGFRL1Q8N441 504 aa12.57□□□□□ -0.4
PNKP-204ENST00000594661 Q8TCH9 128 aa12.57□□□□□ -0.4
PNKP-204ENST00000594661 DSCAMO60469 2012 aa12.56□□□□□ -0.4
PNKP-204ENST00000594661 PPIAL4EA0A075B759 164 aa12.56□□□□□ -0.4
PNKP-204ENST00000594661 PPIAL4CA0A0B4J2A2 164 aa12.56□□□□□ -0.4
PNKP-204ENST00000594661 DEFB108AA8MXU0 73 aa12.56□□□□□ -0.4
PNKP-204ENST00000594661 E7EQL1 145 aa12.56□□□□□ -0.4
PNKP-204ENST00000594661 PPIAL4DF5H284 164 aa12.56□□□□□ -0.4
PNKP-204ENST00000594661 GOSR1O95249 250 aa12.56□□□□□ -0.4
PNKP-204ENST00000594661 PPIAL4FP0DN26 164 aa12.56□□□□□ -0.4
PNKP-204ENST00000594661 RPL30P62888 115 aaKnown RBP12.56□□□□□ -0.4
PNKP-204ENST00000594661 TMEM136Q6ZRR5 245 aa12.56□□□□□ -0.4
PNKP-204ENST00000594661 OCC1Q8TAD7 63 aa12.56□□□□□ -0.4
PNKP-204ENST00000594661 RNASE6Q93091 150 aaKnown RBP12.56□□□□□ -0.4
PNKP-204ENST00000594661 NBASA2RRP1 2371 aa12.56□□□□□ -0.4
PNKP-204ENST00000594661 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.56□□□□□ -0.4
PNKP-204ENST00000594661 C15orf65H3BRN8 121 aa12.56□□□□□ -0.4
PNKP-204ENST00000594661 MGST3O14880 152 aa12.56□□□□□ -0.4
PNKP-204ENST00000594661 ADH4P08319 380 aa12.56□□□□□ -0.4
PNKP-204ENST00000594661 ZNF816Q0VGE8 651 aaPredicted RBP12.56□□□□□ -0.4
PNKP-204ENST00000594661 CATR1Q13166 79 aa12.56□□□□□ -0.4
PNKP-204ENST00000594661 LTC4SQ16873 150 aa12.56□□□□□ -0.4
PNKP-204ENST00000594661 TRAT1Q6PIZ9 186 aa12.56□□□□□ -0.4
PNKP-204ENST00000594661 TMEM14EPQ6UXP3 125 aa12.56□□□□□ -0.4
PNKP-204ENST00000594661 FAM19A2Q8N3H0 131 aa12.56□□□□□ -0.4
PNKP-204ENST00000594661 ZNF439Q8NDP4 499 aa12.56□□□□□ -0.4
PNKP-204ENST00000594661 DEFB108BQ8NET1 73 aa12.56□□□□□ -0.4
PNKP-204ENST00000594661 ATP6V0BQ99437 205 aa12.56□□□□□ -0.4
PNKP-204ENST00000594661 NAT8BQ9UHF3 227 aa12.56□□□□□ -0.4
PNKP-204ENST00000594661 RAI1Q7Z5J4 1906 aaPredicted RBP12.56□□□□□ -0.4
PNKP-204ENST00000594661 DYSFO75923 2080 aa12.56□□□□□ -0.4
PNKP-204ENST00000594661 GNG7O60262 68 aa12.55□□□□□ -0.4
PNKP-204ENST00000594661 THBS3P49746 956 aa12.55□□□□□ -0.4
PNKP-204ENST00000594661 EIF4EBP1Q13541 118 aaPredicted RBP12.55□□□□□ -0.4
PNKP-204ENST00000594661 MMD2Q8IY49 270 aa12.55□□□□□ -0.4
PNKP-204ENST00000594661 PPP1R35Q8TAP8 253 aa12.55□□□□□ -0.4
PNKP-204ENST00000594661 CLEC5AQ9NY25 188 aa12.55□□□□□ -0.4
PNKP-204ENST00000594661 USF3Q68DE3 2245 aa12.55□□□□□ -0.4
PNKP-204ENST00000594661 GAGE10A6NGK3 116 aa12.55□□□□□ -0.4
PNKP-204ENST00000594661 SLC17A3O00476 420 aa12.55□□□□□ -0.4
PNKP-204ENST00000594661 HLA-DRB1P01911 266 aa12.55□□□□□ -0.4
PNKP-204ENST00000594661 SMIM17P0DL12 118 aa12.55□□□□□ -0.4
PNKP-204ENST00000594661 GTF2H5Q6ZYL4 71 aa12.55□□□□□ -0.4
PNKP-204ENST00000594661 FAM181BA6NEQ2 426 aa12.54□□□□□ -0.4
PNKP-204ENST00000594661 C17orf98A8MV24 154 aa12.54□□□□□ -0.4
PNKP-204ENST00000594661 CLDN1O95832 211 aa12.54□□□□□ -0.4
PNKP-204ENST00000594661 PLAUP00749 431 aa12.54□□□□□ -0.4
PNKP-204ENST00000594661 G6PCP35575 357 aa12.54□□□□□ -0.4
PNKP-204ENST00000594661 EDDM3BP56851 147 aa12.54□□□□□ -0.4
PNKP-204ENST00000594661 UBE2G1P62253 170 aa12.54□□□□□ -0.4
PNKP-204ENST00000594661 HTD2P86397 168 aa12.54□□□□□ -0.4
PNKP-204ENST00000594661 EBLN2Q6P2I7 272 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms