RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 ZP3P21754 424 aa11.97□□□□□ -0.49
VRK3-207ENST00000594092 ACOT6Q3I5F7 207 aaPredicted RBP11.97□□□□□ -0.49
VRK3-207ENST00000594092 TMEM144Q7Z5S9 345 aa11.97□□□□□ -0.49
VRK3-207ENST00000594092 SGMS2Q8NHU3 365 aa11.97□□□□□ -0.49
VRK3-207ENST00000594092 SFT2D1Q8WV19 159 aa11.97□□□□□ -0.49
VRK3-207ENST00000594092 GGTLC1Q9BX51 225 aa11.97□□□□□ -0.49
VRK3-207ENST00000594092 NPIPB5A8MRT5 1133 aa11.96□□□□□ -0.49
VRK3-207ENST00000594092 CORTO00230 105 aa11.96□□□□□ -0.49
VRK3-207ENST00000594092 ATP6V0E1O15342 81 aa11.96□□□□□ -0.49
VRK3-207ENST00000594092 GAMTQ14353 236 aa11.96□□□□□ -0.49
VRK3-207ENST00000594092 ETFRF1Q6IPR1 90 aa11.96□□□□□ -0.49
VRK3-207ENST00000594092 TTC9CQ8N5M4 171 aa11.96□□□□□ -0.49
VRK3-207ENST00000594092 OR10G4Q8NGN3 311 aa11.96□□□□□ -0.49
VRK3-207ENST00000594092 OR10G9Q8NGN4 311 aa11.96□□□□□ -0.49
VRK3-207ENST00000594092 OR10G7Q8NGN6 311 aa11.96□□□□□ -0.49
VRK3-207ENST00000594092 MISP3Q96FF7 219 aa11.96□□□□□ -0.49
VRK3-207ENST00000594092 RCC1LQ96I51 464 aaKnown RBP11.96□□□□□ -0.49
VRK3-207ENST00000594092 NARS2Q96I59 477 aaKnown RBP11.96□□□□□ -0.49
VRK3-207ENST00000594092 DEFA4P12838 97 aa11.95□□□□□ -0.5
VRK3-207ENST00000594092 M6PRP20645 277 aa11.95□□□□□ -0.5
VRK3-207ENST00000594092 SRP14P37108 136 aaKnown RBP11.95□□□□□ -0.5
VRK3-207ENST00000594092 SPSB3Q6PJ21 355 aa11.95□□□□□ -0.5
VRK3-207ENST00000594092 BPIFCQ8NFQ6 507 aa11.95□□□□□ -0.5
VRK3-207ENST00000594092 LINC00052Q96N35 136 aa11.95□□□□□ -0.5
VRK3-207ENST00000594092 PBDC1Q9BVG4 233 aa11.95□□□□□ -0.5
VRK3-207ENST00000594092 TREM1Q9NP99 234 aa11.95□□□□□ -0.5
VRK3-207ENST00000594092 PXMP4Q9Y6I8 212 aa11.95□□□□□ -0.5
VRK3-207ENST00000594092 ANK3Q12955 4377 aaKnown RBP11.95□□□□□ -0.5
VRK3-207ENST00000594092 TRAV1-1A0A0B4J248 108 aa11.95□□□□□ -0.5
VRK3-207ENST00000594092 TSPAN9O75954 239 aa11.95□□□□□ -0.5
VRK3-207ENST00000594092 C9orf152Q5JTZ5 239 aa11.95□□□□□ -0.5
VRK3-207ENST00000594092 OR2T6Q8NHC8 308 aa11.95□□□□□ -0.5
VRK3-207ENST00000594092 MBD3L1Q8WWY6 194 aa11.95□□□□□ -0.5
VRK3-207ENST00000594092 ACTR3CQ9C0K3 210 aaPredicted RBP11.95□□□□□ -0.5
VRK3-207ENST00000594092 TNFRSF19Q9NS68 423 aa11.95□□□□□ -0.5
VRK3-207ENST00000594092 VPREB3Q9UKI3 123 aa11.95□□□□□ -0.5
VRK3-207ENST00000594092 CYB5BO43169 146 aa11.94□□□□□ -0.5
VRK3-207ENST00000594092 HOXA3O43365 443 aaPredicted RBP11.94□□□□□ -0.5
VRK3-207ENST00000594092 RPL29P47914 159 aaKnown RBP11.94□□□□□ -0.5
VRK3-207ENST00000594092 BLCAPP62952 87 aa11.94□□□□□ -0.5
VRK3-207ENST00000594092 SRSF3P84103 164 aaKnown RBP11.94□□□□□ -0.5
VRK3-207ENST00000594092 ZNF726P1Q15940 193 aa11.94□□□□□ -0.5
VRK3-207ENST00000594092 ECSCRQ19T08 205 aa11.94□□□□□ -0.5
VRK3-207ENST00000594092 MIC13Q5XKP0 118 aa11.94□□□□□ -0.5
VRK3-207ENST00000594092 UNQ5815/PRO19632Q6UWF5 114 aa11.94□□□□□ -0.5
VRK3-207ENST00000594092 RPP25LQ8N5L8 163 aaKnown RBP11.94□□□□□ -0.5
VRK3-207ENST00000594092 SIGLECL1Q8N7X8 197 aa11.94□□□□□ -0.5
VRK3-207ENST00000594092 OR5T1Q8NG75 326 aa11.94□□□□□ -0.5
VRK3-207ENST00000594092 OR1L6Q8NGR2 347 aa11.94□□□□□ -0.5
VRK3-207ENST00000594092 ACY3Q96HD9 319 aa11.94□□□□□ -0.5
VRK3-207ENST00000594092 SMR3AQ99954 134 aa11.94□□□□□ -0.5
VRK3-207ENST00000594092 TMEM231Q9H6L2 316 aa11.94□□□□□ -0.5
VRK3-207ENST00000594092 SLC39A9Q9NUM3 307 aa11.94□□□□□ -0.5
VRK3-207ENST00000594092 CTXND1A0A1B0GTU2 59 aa11.93□□□□□ -0.5
VRK3-207ENST00000594092 IGHV3-48P01763 117 aa11.93□□□□□ -0.5
VRK3-207ENST00000594092 IGHG2P01859 326 aa11.93□□□□□ -0.5
VRK3-207ENST00000594092 B2MP61769 119 aa11.93□□□□□ -0.5
VRK3-207ENST00000594092 PEA15Q15121 130 aa11.93□□□□□ -0.5
VRK3-207ENST00000594092 GUK1Q16774 197 aa11.93□□□□□ -0.5
VRK3-207ENST00000594092 FAM122CQ6P4D5 195 aa11.93□□□□□ -0.5
VRK3-207ENST00000594092 LCN15Q6UWW0 184 aa11.93□□□□□ -0.5
VRK3-207ENST00000594092 STPG3Q8N7X2 389 aa11.93□□□□□ -0.5
VRK3-207ENST00000594092 FANCD2OSQ96PS1 177 aa11.93□□□□□ -0.5
VRK3-207ENST00000594092 TMUB1Q9BVT8 246 aa11.93□□□□□ -0.5
VRK3-207ENST00000594092 EIF5A2Q9GZV4 153 aaKnown RBP11.93□□□□□ -0.5
VRK3-207ENST00000594092 MRPL36Q9P0J6 103 aaKnown RBP11.93□□□□□ -0.5
VRK3-207ENST00000594092 IGKV1OR2-108A0A075B7D4 117 aa11.93□□□□□ -0.5
VRK3-207ENST00000594092 MAP1LC3B2A6NCE7 125 aa11.93□□□□□ -0.5
VRK3-207ENST00000594092 G3V318 75 aa11.93□□□□□ -0.5
VRK3-207ENST00000594092 MT-CO2P00403 227 aa11.93□□□□□ -0.5
VRK3-207ENST00000594092 HNF1AP20823 631 aa11.93□□□□□ -0.5
VRK3-207ENST00000594092 CRIP2P52943 208 aaPredicted RBP11.93□□□□□ -0.5
VRK3-207ENST00000594092 CCL20P78556 96 aa11.93□□□□□ -0.5
VRK3-207ENST00000594092 AKIRIN2Q53H80 203 aa11.93□□□□□ -0.5
VRK3-207ENST00000594092 SSX7Q7RTT5 188 aa11.93□□□□□ -0.5
VRK3-207ENST00000594092 FAM110DQ8TAY7 271 aaPredicted RBP11.93□□□□□ -0.5
VRK3-207ENST00000594092 TMEM68Q96MH6 324 aa11.93□□□□□ -0.5
VRK3-207ENST00000594092 MAP1LC3BQ9GZQ8 125 aa11.93□□□□□ -0.5
VRK3-207ENST00000594092 SLC25A22Q9H936 323 aa11.93□□□□□ -0.5
VRK3-207ENST00000594092 IGLV11-55A0A075B6I3 123 aa11.92□□□□□ -0.5
VRK3-207ENST00000594092 IGHV3-21A0A0B4J1V1 117 aa11.92□□□□□ -0.5
VRK3-207ENST00000594092 TMEM218A2RU14 115 aa11.92□□□□□ -0.5
VRK3-207ENST00000594092 I3L2K1 104 aa11.92□□□□□ -0.5
VRK3-207ENST00000594092 CD5P06127 495 aa11.92□□□□□ -0.5
VRK3-207ENST00000594092 OR10J1P30954 320 aa11.92□□□□□ -0.5
VRK3-207ENST00000594092 Q6ZS46 218 aa11.92□□□□□ -0.5
VRK3-207ENST00000594092 SLC35E3Q7Z769 313 aa11.92□□□□□ -0.5
VRK3-207ENST00000594092 NPIPB3Q92617 1050 aa11.92□□□□□ -0.5
VRK3-207ENST00000594092 TMEM160Q9NX00 188 aa11.92□□□□□ -0.5
VRK3-207ENST00000594092 SLC45A2Q9UMX9 530 aa11.92□□□□□ -0.5
VRK3-207ENST00000594092 A0A1W2PPV4 95 aa11.91□□□□□ -0.5
VRK3-207ENST00000594092 K7EIM0 57 aa11.91□□□□□ -0.5
VRK3-207ENST00000594092 YIF1AO95070 293 aa11.91□□□□□ -0.5
VRK3-207ENST00000594092 LY6G6DO95868 133 aa11.91□□□□□ -0.5
VRK3-207ENST00000594092 CDC34P49427 236 aaPredicted RBP11.91□□□□□ -0.5
VRK3-207ENST00000594092 RND2P52198 227 aa11.91□□□□□ -0.5
VRK3-207ENST00000594092 PRR20EP86478 221 aa11.91□□□□□ -0.5
VRK3-207ENST00000594092 PRR20CP86479 221 aa11.91□□□□□ -0.5
VRK3-207ENST00000594092 PRR20DP86480 221 aa11.91□□□□□ -0.5
VRK3-207ENST00000594092 PRR20BP86481 221 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms