RNA–Protein interactions for RNA: ENST00000593827.1

COPE-204, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-204ENST00000593827 PVRIGQ6DKI7 326 aa15.1■□□□□ 0.01
COPE-204ENST00000593827 TMED4Q7Z7H5 227 aa15.1■□□□□ 0.01
COPE-204ENST00000593827 NAP1L6A6NFF2 107 aa15.09■□□□□ 0.01
COPE-204ENST00000593827 SCAF4O95104 1147 aaKnown RBP15.09■□□□□ 0.01
COPE-204ENST00000593827 CD5P06127 495 aa15.09■□□□□ 0.01
COPE-204ENST00000593827 CD7P09564 240 aa15.09■□□□□ 0.01
COPE-204ENST00000593827 SMCO1Q147U7 214 aa15.09■□□□□ 0.01
COPE-204ENST00000593827 RNASEH2CQ8TDP1 164 aaKnown RBP15.09■□□□□ 0.01
COPE-204ENST00000593827 KMT2CQ8NEZ4 4911 aaKnown RBP15.09■□□□□ 0.01
COPE-204ENST00000593827 TRAV30A0A087WSZ9 112 aa15.08■□□□□ 0
COPE-204ENST00000593827 CENPXA8MT69 81 aa15.08■□□□□ 0
COPE-204ENST00000593827 TSPAN4O14817 238 aa15.08■□□□□ 0
COPE-204ENST00000593827 RBMS2Q15434 407 aaKnown RBP15.08■□□□□ 0
COPE-204ENST00000593827 BSXQ3C1V8 233 aa15.08■□□□□ 0
COPE-204ENST00000593827 C2orf83Q53S99 150 aa15.08■□□□□ 0
COPE-204ENST00000593827 ETFRF1Q6IPR1 90 aa15.08■□□□□ 0
COPE-204ENST00000593827 ZNF600Q6ZNG1 722 aa15.08■□□□□ 0
COPE-204ENST00000593827 OR10C1Q96KK4 312 aa15.08■□□□□ 0
COPE-204ENST00000593827 SRRQ9GZT4 340 aa15.08■□□□□ 0
COPE-204ENST00000593827 SRD5A3Q9H8P0 318 aa15.08■□□□□ 0
COPE-204ENST00000593827 TRAV14DV4A0A0A6YYC5 116 aa15.07■□□□□ 0
COPE-204ENST00000593827 A0A1B0GU03 582 aa15.07■□□□□ 0
COPE-204ENST00000593827 OR4C46A6NHA9 309 aa15.07■□□□□ 0
COPE-204ENST00000593827 IGHV3-48P01763 117 aa15.07■□□□□ 0
COPE-204ENST00000593827 SLC25A4P12235 298 aa15.07■□□□□ 0
COPE-204ENST00000593827 VAMP1P23763 118 aa15.07■□□□□ 0
COPE-204ENST00000593827 ATP5IP56385 69 aaPredicted RBP15.07■□□□□ 0
COPE-204ENST00000593827 SUPT4H1P63272 117 aaKnown RBP15.07■□□□□ 0
COPE-204ENST00000593827 HAGHQ16775 308 aa15.07■□□□□ 0
COPE-204ENST00000593827 DEFB125Q8N687 156 aa15.07■□□□□ 0
COPE-204ENST00000593827 TMEM116Q8NCL8 245 aa15.07■□□□□ 0
COPE-204ENST00000593827 SLC24A4Q8NFF2 622 aa15.07■□□□□ 0
COPE-204ENST00000593827 OR4X1Q8NH49 305 aa15.07■□□□□ 0
COPE-204ENST00000593827 SMPXQ9UHP9 88 aa15.07■□□□□ 0
COPE-204ENST00000593827 U3KQ87 197 aa15.07■□□□□ 0
COPE-204ENST00000593827 IGHV7-4-1A0A0J9YVY3 117 aa15.06■□□□□ 0
COPE-204ENST00000593827 CLN5O75503 358 aa15.06■□□□□ 0
COPE-204ENST00000593827 UBE2MP61081 183 aaKnown RBP15.06■□□□□ 0
COPE-204ENST00000593827 TNFRSF9Q07011 255 aa15.06■□□□□ 0
COPE-204ENST00000593827 NMSQ5H8A3 153 aa15.06■□□□□ 0
COPE-204ENST00000593827 CENPSQ8N2Z9 138 aa15.06■□□□□ 0
COPE-204ENST00000593827 TMEM231Q9H6L2 316 aa15.06■□□□□ 0
COPE-204ENST00000593827 TENM3Q9P273 2699 aa15.05■□□□□ 0
COPE-204ENST00000593827 TMEM50AO95807 157 aa15.05■□□□□ -0
COPE-204ENST00000593827 CMC4P56277 68 aaPredicted RBP15.05■□□□□ -0
COPE-204ENST00000593827 LYZL2Q7Z4W2 148 aa15.05■□□□□ -0
COPE-204ENST00000593827 OR1S1Q8NH92 325 aa15.05■□□□□ -0
COPE-204ENST00000593827 NARS2Q96I59 477 aaKnown RBP15.05■□□□□ -0
COPE-204ENST00000593827 RHPN1-AS1Q9BWJ2 59 aa15.05■□□□□ -0
COPE-204ENST00000593827 HSPB7Q9UBY9 170 aa15.05■□□□□ -0
COPE-204ENST00000593827 IGHV3OR16-8A0A075B7F1 116 aa15.04■□□□□ -0
COPE-204ENST00000593827 C3orf84H3BNL1 204 aa15.04■□□□□ -0
COPE-204ENST00000593827 ZNF207O43670 478 aaKnown RBP15.04■□□□□ -0
COPE-204ENST00000593827 IFNA10P01566 189 aa15.04■□□□□ -0
COPE-204ENST00000593827 SLC25A6P12236 298 aa15.04■□□□□ -0
COPE-204ENST00000593827 NPY1RP25929 384 aa15.04■□□□□ -0
COPE-204ENST00000593827 PAFAH1B2P68402 229 aa15.04■□□□□ -0
COPE-204ENST00000593827 LRTM2Q8N967 370 aa15.04■□□□□ -0
COPE-204ENST00000593827 DTD1Q8TEA8 209 aa15.04■□□□□ -0
COPE-204ENST00000593827 C7orf50Q9BRJ6 194 aaKnown RBP15.04■□□□□ -0
COPE-204ENST00000593827 TMED3Q9Y3Q3 217 aa15.04■□□□□ -0
COPE-204ENST00000593827 A0A1W2PS18 150 aa15.03■□□□□ -0
COPE-204ENST00000593827 CHEK1O14757 476 aa15.03■□□□□ -0
COPE-204ENST00000593827 CNPY1Q3B7I2 92 aa15.03■□□□□ -0
COPE-204ENST00000593827 TOMM20LQ6UXN7 152 aa15.03■□□□□ -0
COPE-204ENST00000593827 LINC00322Q6ZN03 302 aaPredicted RBP15.03■□□□□ -0
COPE-204ENST00000593827 FAM110AQ9BQ89 295 aa15.03■□□□□ -0
COPE-204ENST00000593827 PRR13Q9NZ81 148 aa15.03■□□□□ -0
COPE-204ENST00000593827 PUS1Q9Y606 427 aaKnown RBP eCLIP15.03■□□□□ -0
COPE-204ENST00000593827 SELENOKQ9Y6D0 94 aa15.03■□□□□ -0
COPE-204ENST00000593827 STAB2Q8WWQ8 2551 aa15.02■□□□□ -0
COPE-204ENST00000593827 MED6O75586 246 aa15.02■□□□□ -0
COPE-204ENST00000593827 SFT2D2O95562 160 aa15.02■□□□□ -0
COPE-204ENST00000593827 OR1S2Q8NGQ3 325 aa15.02■□□□□ -0
COPE-204ENST00000593827 CITED4Q96RK1 184 aa15.02■□□□□ -0
COPE-204ENST00000593827 FNDC4Q9H6D8 234 aaPredicted RBP15.02■□□□□ -0
COPE-204ENST00000593827 FAM90A26D6RGX4 464 aa15.01□□□□□ -0.01
COPE-204ENST00000593827 NXPH3O95157 252 aa15.01□□□□□ -0.01
COPE-204ENST00000593827 NPPCP23582 126 aa15.01□□□□□ -0.01
COPE-204ENST00000593827 RPP30P78346 268 aaKnown RBP15.01□□□□□ -0.01
COPE-204ENST00000593827 METTL26Q96S19 204 aa15.01□□□□□ -0.01
COPE-204ENST00000593827 GGTLC1Q9BX51 225 aa15.01□□□□□ -0.01
COPE-204ENST00000593827 LOC102724200A0A096LPH7 203 aaPredicted RBP15□□□□□ -0.01
COPE-204ENST00000593827 NDUFB6O95139 128 aa15□□□□□ -0.01
COPE-204ENST00000593827 PPP1R1AQ13522 171 aa15□□□□□ -0.01
COPE-204ENST00000593827 BAK1Q16611 211 aa15□□□□□ -0.01
COPE-204ENST00000593827 MUC7Q8TAX7 377 aa15□□□□□ -0.01
COPE-204ENST00000593827 Q8WTZ3 238 aa15□□□□□ -0.01
COPE-204ENST00000593827 CIB3Q96Q77 187 aaPredicted RBP15□□□□□ -0.01
COPE-204ENST00000593827 RNF2Q99496 336 aa15□□□□□ -0.01
COPE-204ENST00000593827 WFDC10AQ9H1F0 79 aa15□□□□□ -0.01
COPE-204ENST00000593827 RBKSQ9H477 322 aa15□□□□□ -0.01
COPE-204ENST00000593827 RBMY1BA6NDE4 496 aaKnown RBP14.99□□□□□ -0.01
COPE-204ENST00000593827 RBMY1EA6NEQ0 496 aaKnown RBP14.99□□□□□ -0.01
COPE-204ENST00000593827 IFNA4P05014 189 aa14.99□□□□□ -0.01
COPE-204ENST00000593827 RBMY1DP0C7P1 496 aaKnown RBP14.99□□□□□ -0.01
COPE-204ENST00000593827 RND2P52198 227 aa14.99□□□□□ -0.01
COPE-204ENST00000593827 PRSS54Q6PEW0 395 aa14.99□□□□□ -0.01
COPE-204ENST00000593827 COQ8AQ8NI60 647 aa14.99□□□□□ -0.01
COPE-204ENST00000593827 GRAMD2BQ96HH9 432 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms