RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 RNASE2P10153 161 aaKnown RBP16.5■□□□□ 0.23
SSBP4-203ENST00000593641 ELK1P19419 428 aa16.5■□□□□ 0.23
SSBP4-203ENST00000593641 NCS1P62166 190 aa16.5■□□□□ 0.23
SSBP4-203ENST00000593641 TRIM16LQ309B1 348 aa16.5■□□□□ 0.23
SSBP4-203ENST00000593641 PVRIGQ6DKI7 326 aa16.5■□□□□ 0.23
SSBP4-203ENST00000593641 Q8NAQ8 132 aa16.5■□□□□ 0.23
SSBP4-203ENST00000593641 RNASE11Q8TAA1 199 aaKnown RBP16.5■□□□□ 0.23
SSBP4-203ENST00000593641 TMEM230Q96A57 120 aa16.5■□□□□ 0.23
SSBP4-203ENST00000593641 C3orf85A0A1B0GTC6 90 aa16.49■□□□□ 0.23
SSBP4-203ENST00000593641 HPGDSO60760 199 aa16.49■□□□□ 0.23
SSBP4-203ENST00000593641 P0C879 139 aa16.49■□□□□ 0.23
SSBP4-203ENST00000593641 SPP1P10451 314 aa16.49■□□□□ 0.23
SSBP4-203ENST00000593641 ETV6P41212 452 aa16.49■□□□□ 0.23
SSBP4-203ENST00000593641 P2RY1P47900 373 aa16.49■□□□□ 0.23
SSBP4-203ENST00000593641 PRR20EP86478 221 aa16.49■□□□□ 0.23
SSBP4-203ENST00000593641 PRR20CP86479 221 aa16.49■□□□□ 0.23
SSBP4-203ENST00000593641 PRR20DP86480 221 aa16.49■□□□□ 0.23
SSBP4-203ENST00000593641 PRR20BP86481 221 aa16.49■□□□□ 0.23
SSBP4-203ENST00000593641 PRR20AP86496 221 aa16.49■□□□□ 0.23
SSBP4-203ENST00000593641 RNASE12Q5GAN4 147 aaKnown RBP16.49■□□□□ 0.23
SSBP4-203ENST00000593641 MORN3Q6PF18 240 aaPredicted RBP16.49■□□□□ 0.23
SSBP4-203ENST00000593641 LHFPL1Q86WI0 220 aa16.49■□□□□ 0.23
SSBP4-203ENST00000593641 CENPSQ8N2Z9 138 aa16.49■□□□□ 0.23
SSBP4-203ENST00000593641 ARRDC1Q8N5I2 433 aa16.49■□□□□ 0.23
SSBP4-203ENST00000593641 RRNAD1Q96FB5 475 aaKnown RBP16.49■□□□□ 0.23
SSBP4-203ENST00000593641 GRAMD2BQ96HH9 432 aa16.49■□□□□ 0.23
SSBP4-203ENST00000593641 COPZ2Q9P299 210 aa16.49■□□□□ 0.23
SSBP4-203ENST00000593641 FAM25AB3EWG3 89 aa16.48■□□□□ 0.23
SSBP4-203ENST00000593641 FAM25CB3EWG5 89 aa16.48■□□□□ 0.23
SSBP4-203ENST00000593641 FAM25GB3EWG6 89 aa16.48■□□□□ 0.23
SSBP4-203ENST00000593641 K7EQG2 157 aa16.48■□□□□ 0.23
SSBP4-203ENST00000593641 MIFP14174 115 aa16.48■□□□□ 0.23
SSBP4-203ENST00000593641 TRPT1Q86TN4 253 aaKnown RBP16.48■□□□□ 0.23
SSBP4-203ENST00000593641 CCDC71LQ8N9Z2 235 aa16.48■□□□□ 0.23
SSBP4-203ENST00000593641 OR4X1Q8NH49 305 aa16.48■□□□□ 0.23
SSBP4-203ENST00000593641 KRTAP17-1Q9BYP8 105 aa16.48■□□□□ 0.23
SSBP4-203ENST00000593641 IGHV4-28A0A0C4DH34 117 aa16.47■□□□□ 0.23
SSBP4-203ENST00000593641 TNFAIP8O95379 198 aa16.47■□□□□ 0.23
SSBP4-203ENST00000593641 ZNF688P0C7X2 276 aa16.47■□□□□ 0.23
SSBP4-203ENST00000593641 CRYBB3P26998 211 aa16.47■□□□□ 0.23
SSBP4-203ENST00000593641 EIF2B2P49770 351 aaKnown RBP16.47■□□□□ 0.23
SSBP4-203ENST00000593641 PPP5CP53041 499 aa16.47■□□□□ 0.23
SSBP4-203ENST00000593641 VBP1P61758 197 aa16.47■□□□□ 0.23
SSBP4-203ENST00000593641 FUNDC2Q9BWH2 189 aa16.47■□□□□ 0.23
SSBP4-203ENST00000593641 FNDC4Q9H6D8 234 aaPredicted RBP16.47■□□□□ 0.23
SSBP4-203ENST00000593641 MRPL36Q9P0J6 103 aaKnown RBP16.47■□□□□ 0.23
SSBP4-203ENST00000593641 KLK11Q9UBX7 282 aa16.47■□□□□ 0.23
SSBP4-203ENST00000593641 CD3DP04234 171 aa16.46■□□□□ 0.23
SSBP4-203ENST00000593641 TBPP20226 339 aa16.46■□□□□ 0.23
SSBP4-203ENST00000593641 RPL5P46777 297 aaKnown RBP16.46■□□□□ 0.23
SSBP4-203ENST00000593641 RORCP51449 518 aa16.46■□□□□ 0.23
SSBP4-203ENST00000593641 MZT2AQ6P582 158 aa16.46■□□□□ 0.23
SSBP4-203ENST00000593641 ZFAND1Q8TCF1 268 aa16.46■□□□□ 0.23
SSBP4-203ENST00000593641 APLNQ9ULZ1 77 aa16.46■□□□□ 0.23
SSBP4-203ENST00000593641 TRAV30A0A087WSZ9 112 aa16.45■□□□□ 0.22
SSBP4-203ENST00000593641 RPS10-NUDT3A0A1W2PQS6 291 aa16.45■□□□□ 0.22
SSBP4-203ENST00000593641 KNCNA6PVL3 124 aa16.45■□□□□ 0.22
SSBP4-203ENST00000593641 GIG44P09565 113 aaPredicted RBP16.45■□□□□ 0.22
SSBP4-203ENST00000593641 RBMY1A1P0DJD3 496 aaKnown RBP16.45■□□□□ 0.22
SSBP4-203ENST00000593641 RBMY1CP0DJD4 496 aa16.45■□□□□ 0.22
SSBP4-203ENST00000593641 RBMY1FQ15415 496 aaKnown RBP16.45■□□□□ 0.22
SSBP4-203ENST00000593641 SP6Q3SY56 376 aa16.45■□□□□ 0.22
SSBP4-203ENST00000593641 B3GALNT1O75752 331 aa16.44■□□□□ 0.22
SSBP4-203ENST00000593641 C4BPBP20851 252 aa16.44■□□□□ 0.22
SSBP4-203ENST00000593641 UCP1P25874 307 aa16.44■□□□□ 0.22
SSBP4-203ENST00000593641 HLA-DMBP28068 263 aa16.44■□□□□ 0.22
SSBP4-203ENST00000593641 MLANAQ16655 118 aa16.44■□□□□ 0.22
SSBP4-203ENST00000593641 TIGITQ495A1 244 aa16.44■□□□□ 0.22
SSBP4-203ENST00000593641 ACTL10Q5JWF8 245 aa16.44■□□□□ 0.22
SSBP4-203ENST00000593641 DCANP1Q8TF63 244 aa16.44■□□□□ 0.22
SSBP4-203ENST00000593641 AP3S1Q92572 193 aa16.44■□□□□ 0.22
SSBP4-203ENST00000593641 TRAV10A0A0B4J240 114 aa16.43■□□□□ 0.22
SSBP4-203ENST00000593641 HELTA6NFD8 242 aa16.43■□□□□ 0.22
SSBP4-203ENST00000593641 ZNF705EA8MWA4 302 aaPredicted RBP16.43■□□□□ 0.22
SSBP4-203ENST00000593641 IGKV1-17P01599 117 aa16.43■□□□□ 0.22
SSBP4-203ENST00000593641 HTR2BP41595 481 aa16.43■□□□□ 0.22
SSBP4-203ENST00000593641 BSXQ3C1V8 233 aa16.43■□□□□ 0.22
SSBP4-203ENST00000593641 SCGB2B2Q4G0G5 96 aa16.43■□□□□ 0.22
SSBP4-203ENST00000593641 Q6ZTC4 211 aa16.43■□□□□ 0.22
SSBP4-203ENST00000593641 OR52I2Q8NH67 350 aa16.43■□□□□ 0.22
SSBP4-203ENST00000593641 MTFP1Q9UDX5 166 aa16.43■□□□□ 0.22
SSBP4-203ENST00000593641 A0A0G2JRQ6 117 aa16.42■□□□□ 0.22
SSBP4-203ENST00000593641 SPCS3P61009 180 aa16.42■□□□□ 0.22
SSBP4-203ENST00000593641 DHRS2Q13268 280 aa16.42■□□□□ 0.22
SSBP4-203ENST00000593641 FAM219AQ8IW50 185 aa16.42■□□□□ 0.22
SSBP4-203ENST00000593641 OR13C8Q8NGS7 320 aa16.42■□□□□ 0.22
SSBP4-203ENST00000593641 TERB2Q8NHR7 220 aa16.42■□□□□ 0.22
SSBP4-203ENST00000593641 CLEC5AQ9NY25 188 aa16.42■□□□□ 0.22
SSBP4-203ENST00000593641 EXTL2Q9UBQ6 330 aa16.42■□□□□ 0.22
SSBP4-203ENST00000593641 TBC1D24Q9ULP9 559 aa16.42■□□□□ 0.22
SSBP4-203ENST00000593641 X6R8D5 127 aa16.42■□□□□ 0.22
SSBP4-203ENST00000593641 AP2S1P53680 142 aaPredicted RBP16.41■□□□□ 0.22
SSBP4-203ENST00000593641 TAS2R19P59542 299 aa16.41■□□□□ 0.22
SSBP4-203ENST00000593641 OR1S2Q8NGQ3 325 aa16.41■□□□□ 0.22
SSBP4-203ENST00000593641 Q8WTZ3 238 aa16.41■□□□□ 0.22
SSBP4-203ENST00000593641 HEYLQ9NQ87 328 aaPredicted RBP16.41■□□□□ 0.22
SSBP4-203ENST00000593641 KIAA1109Q2LD37 5005 aa16.41■□□□□ 0.22
SSBP4-203ENST00000593641 IGHV4-4A0A075B6R2 117 aa16.4■□□□□ 0.22
SSBP4-203ENST00000593641 HNRNPCP07910 306 aaKnown RBP eCLIP16.4■□□□□ 0.22
SSBP4-203ENST00000593641 IGLC1P0CG04 106 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms