RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 PIEZO2Q9H5I5 2752 aa13.34□□□□□ -0.27
PRKCSH-217ENST00000592741 PKDREJQ9NTG1 2253 aa13.34□□□□□ -0.27
PRKCSH-217ENST00000592741 DMXL2Q8TDJ6 3036 aa13.33□□□□□ -0.28
PRKCSH-217ENST00000592741 PTPRZ1P23471 2315 aaPredicted RBP13.33□□□□□ -0.28
PRKCSH-217ENST00000592741 PPIAL4CA0A0B4J2A2 164 aa13.33□□□□□ -0.28
PRKCSH-217ENST00000592741 GGTLC3B5MD39 225 aa13.33□□□□□ -0.28
PRKCSH-217ENST00000592741 PPIAL4GP0DN37 164 aa13.33□□□□□ -0.28
PRKCSH-217ENST00000592741 RPL27AP46776 148 aaKnown RBP13.33□□□□□ -0.28
PRKCSH-217ENST00000592741 CNN1P51911 297 aaKnown RBP13.33□□□□□ -0.28
PRKCSH-217ENST00000592741 UBE2L3P68036 154 aaKnown RBP13.33□□□□□ -0.28
PRKCSH-217ENST00000592741 ZNF90Q03938 601 aa13.33□□□□□ -0.28
PRKCSH-217ENST00000592741 KLRB1Q12918 225 aa13.33□□□□□ -0.28
PRKCSH-217ENST00000592741 PRSS8Q16651 343 aa13.33□□□□□ -0.28
PRKCSH-217ENST00000592741 C10orf113Q5VZT2 155 aa13.33□□□□□ -0.28
PRKCSH-217ENST00000592741 BEND2Q8NDZ0 799 aa13.33□□□□□ -0.28
PRKCSH-217ENST00000592741 OR5AU1Q8NGC0 362 aa13.33□□□□□ -0.28
PRKCSH-217ENST00000592741 FAM167A-AS1Q96KT0 104 aa13.33□□□□□ -0.28
PRKCSH-217ENST00000592741 RAXQ9Y2V3 346 aa13.33□□□□□ -0.28
PRKCSH-217ENST00000592741 IGHV1-3A0A0C4DH29 117 aa13.33□□□□□ -0.28
PRKCSH-217ENST00000592741 IGLC7A0M8Q6 106 aa13.33□□□□□ -0.28
PRKCSH-217ENST00000592741 BUB1B-PAK6H3BSN5 160 aa13.33□□□□□ -0.28
PRKCSH-217ENST00000592741 TNXAQ16473 311 aa13.33□□□□□ -0.28
PRKCSH-217ENST00000592741 AMMECR1Q9Y4X0 333 aaPredicted RBP13.33□□□□□ -0.28
PRKCSH-217ENST00000592741 IGKV1D-37A0A075B6S9 117 aa13.32□□□□□ -0.28
PRKCSH-217ENST00000592741 TRAV5A0A0B4J249 113 aa13.32□□□□□ -0.28
PRKCSH-217ENST00000592741 AMBPP02760 352 aa13.32□□□□□ -0.28
PRKCSH-217ENST00000592741 CRYGBP07316 175 aa13.32□□□□□ -0.28
PRKCSH-217ENST00000592741 DLX1P56177 255 aa13.32□□□□□ -0.28
PRKCSH-217ENST00000592741 ERVFC1-1P60608 527 aa13.32□□□□□ -0.28
PRKCSH-217ENST00000592741 SUMO1P63165 101 aaKnown RBP13.32□□□□□ -0.28
PRKCSH-217ENST00000592741 CDPF1Q6NVV7 123 aa13.32□□□□□ -0.28
PRKCSH-217ENST00000592741 OR8B3Q8NGG8 313 aa13.32□□□□□ -0.28
PRKCSH-217ENST00000592741 OR8B2Q96RD0 313 aa13.32□□□□□ -0.28
PRKCSH-217ENST00000592741 SLC17A3O00476 420 aa13.31□□□□□ -0.28
PRKCSH-217ENST00000592741 IGHV3-48P01763 117 aa13.31□□□□□ -0.28
PRKCSH-217ENST00000592741 COX7A1P24310 79 aa13.31□□□□□ -0.28
PRKCSH-217ENST00000592741 SSX2Q16385 188 aa13.31□□□□□ -0.28
PRKCSH-217ENST00000592741 TIGITQ495A1 244 aa13.31□□□□□ -0.28
PRKCSH-217ENST00000592741 MORN5Q5VZ52 161 aa13.31□□□□□ -0.28
PRKCSH-217ENST00000592741 C22orf15Q8WYQ4 148 aa13.31□□□□□ -0.28
PRKCSH-217ENST00000592741 MISP3Q96FF7 219 aa13.31□□□□□ -0.28
PRKCSH-217ENST00000592741 COL25A1Q9BXS0 654 aaPredicted RBP13.31□□□□□ -0.28
PRKCSH-217ENST00000592741 ZNF355PQ9NSJ1 428 aa13.31□□□□□ -0.28
PRKCSH-217ENST00000592741 HIST1H1BP16401 226 aaKnown RBP13.31□□□□□ -0.28
PRKCSH-217ENST00000592741 CNTFRP26992 372 aa13.31□□□□□ -0.28
PRKCSH-217ENST00000592741 RPEL1Q2QD12 228 aa13.31□□□□□ -0.28
PRKCSH-217ENST00000592741 PVRIGQ6DKI7 326 aa13.31□□□□□ -0.28
PRKCSH-217ENST00000592741 HCP5Q6MZN7 132 aa13.31□□□□□ -0.28
PRKCSH-217ENST00000592741 C8orf46Q8TAG6 207 aa13.31□□□□□ -0.28
PRKCSH-217ENST00000592741 RPEQ96AT9 228 aa13.31□□□□□ -0.28
PRKCSH-217ENST00000592741 PAXXQ9BUH6 204 aa13.31□□□□□ -0.28
PRKCSH-217ENST00000592741 MRPL36Q9P0J6 103 aaKnown RBP13.31□□□□□ -0.28
PRKCSH-217ENST00000592741 SIGLEC9Q9Y336 463 aa13.31□□□□□ -0.28
PRKCSH-217ENST00000592741 SPTBN2O15020 2390 aa13.31□□□□□ -0.28
PRKCSH-217ENST00000592741 COMPP49747 757 aaPredicted RBP13.3□□□□□ -0.28
PRKCSH-217ENST00000592741 YPEL3P61236 119 aaPredicted RBP13.3□□□□□ -0.28
PRKCSH-217ENST00000592741 PRB3Q04118 309 aaPredicted RBP13.3□□□□□ -0.28
PRKCSH-217ENST00000592741 OR5I1Q13606 314 aa13.3□□□□□ -0.28
PRKCSH-217ENST00000592741 SMG1Q96Q15 3661 aaKnown RBP13.3□□□□□ -0.28
PRKCSH-217ENST00000592741 PTPRQQ9UMZ3 2332 aa13.3□□□□□ -0.28
PRKCSH-217ENST00000592741 PATE2Q6UY27 113 aa13.3□□□□□ -0.28
PRKCSH-217ENST00000592741 RAB1BQ9H0U4 201 aa13.3□□□□□ -0.28
PRKCSH-217ENST00000592741 V9GYV3 84 aa13.3□□□□□ -0.28
PRKCSH-217ENST00000592741 CORTO00230 105 aa13.29□□□□□ -0.28
PRKCSH-217ENST00000592741 CRYGCP07315 174 aa13.29□□□□□ -0.28
PRKCSH-217ENST00000592741 LGALS4P56470 323 aa13.29□□□□□ -0.28
PRKCSH-217ENST00000592741 ADORA2A-AS1P86434 159 aa13.29□□□□□ -0.28
PRKCSH-217ENST00000592741 TNFRSF19Q9NS68 423 aa13.29□□□□□ -0.28
PRKCSH-217ENST00000592741 ONECUT1Q9UBC0 465 aa13.29□□□□□ -0.28
PRKCSH-217ENST00000592741 POLEQ07864 2286 aa13.29□□□□□ -0.28
PRKCSH-217ENST00000592741 PPP1R27Q86WC6 154 aa13.28□□□□□ -0.28
PRKCSH-217ENST00000592741 OR5R1Q8NH85 324 aa13.28□□□□□ -0.28
PRKCSH-217ENST00000592741 TMEM18Q96B42 140 aa13.28□□□□□ -0.28
PRKCSH-217ENST00000592741 TRGV9Q99603 122 aa13.28□□□□□ -0.28
PRKCSH-217ENST00000592741 OSTCQ9NRP0 149 aa13.28□□□□□ -0.28
PRKCSH-217ENST00000592741 GCGP01275 180 aa13.28□□□□□ -0.28
PRKCSH-217ENST00000592741 LIPFP07098 398 aa13.28□□□□□ -0.28
PRKCSH-217ENST00000592741 PYYP10082 97 aa13.28□□□□□ -0.28
PRKCSH-217ENST00000592741 MFAP2P55001 183 aa13.28□□□□□ -0.28
PRKCSH-217ENST00000592741 JOSD1Q15040 202 aaPredicted RBP13.28□□□□□ -0.28
PRKCSH-217ENST00000592741 PERPQ96FX8 193 aa13.28□□□□□ -0.28
PRKCSH-217ENST00000592741 IGF2BP2-AS1Q96M15 143 aa13.28□□□□□ -0.28
PRKCSH-217ENST00000592741 C22orf46C9J442 243 aa13.27□□□□□ -0.28
PRKCSH-217ENST00000592741 MOSP00540 346 aa13.27□□□□□ -0.28
PRKCSH-217ENST00000592741 RD3LP0DJH9 198 aa13.27□□□□□ -0.28
PRKCSH-217ENST00000592741 ADMP35318 185 aa13.27□□□□□ -0.28
PRKCSH-217ENST00000592741 TAS2R60P59551 318 aa13.27□□□□□ -0.28
PRKCSH-217ENST00000592741 LINC00305Q7Z4B0 112 aa13.27□□□□□ -0.28
PRKCSH-217ENST00000592741 TIMD4Q96H15 378 aa13.27□□□□□ -0.28
PRKCSH-217ENST00000592741 RNF5Q99942 180 aa13.27□□□□□ -0.28
PRKCSH-217ENST00000592741 PRDM13Q9H4Q3 707 aa13.27□□□□□ -0.28
PRKCSH-217ENST00000592741 ADGRG4Q8IZF6 3080 aa13.27□□□□□ -0.29
PRKCSH-217ENST00000592741 APELAP0DMC3 54 aa13.27□□□□□ -0.29
PRKCSH-217ENST00000592741 RPL19P84098 196 aaKnown RBP13.27□□□□□ -0.29
PRKCSH-217ENST00000592741 PAX2Q02962 417 aa13.27□□□□□ -0.29
PRKCSH-217ENST00000592741 CDSNQ15517 529 aa13.27□□□□□ -0.29
PRKCSH-217ENST00000592741 LY6G5BQ8NDX9 201 aa13.27□□□□□ -0.29
PRKCSH-217ENST00000592741 STXBP6Q8NFX7 210 aa13.27□□□□□ -0.29
PRKCSH-217ENST00000592741 OR1L6Q8NGR2 347 aa13.27□□□□□ -0.29
PRKCSH-217ENST00000592741 CDC42EP3Q9UKI2 254 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms