RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 TCEAL2Q9H3H9 227 aaPredicted RBP4.45□□□□□ -1.7
VMP1-215ENST00000592619 NOX3Q9HBY0 568 aa4.45□□□□□ -1.7
VMP1-215ENST00000592619 SLC23A2Q9UGH3 650 aa4.45□□□□□ -1.7
VMP1-215ENST00000592619 LAMTOR3Q9UHA4 124 aa4.45□□□□□ -1.7
VMP1-215ENST00000592619 KLF13Q9Y2Y9 288 aaPredicted RBP4.45□□□□□ -1.7
VMP1-215ENST00000592619 PIEZO1Q92508 2521 aa4.45□□□□□ -1.7
VMP1-215ENST00000592619 ZFC3H1O60293 1989 aaKnown RBP4.44□□□□□ -1.7
VMP1-215ENST00000592619 IGLV1-36A0A0B4J1U3 117 aa4.44□□□□□ -1.7
VMP1-215ENST00000592619 RBMY1BA6NDE4 496 aaKnown RBP4.44□□□□□ -1.7
VMP1-215ENST00000592619 RBMY1EA6NEQ0 496 aaKnown RBP4.44□□□□□ -1.7
VMP1-215ENST00000592619 OR4C45A6NMZ5 311 aa4.44□□□□□ -1.7
VMP1-215ENST00000592619 C12orf77C9JDV5 145 aa4.44□□□□□ -1.7
VMP1-215ENST00000592619 TRAF3IP2O43734 574 aaPredicted RBP4.44□□□□□ -1.7
VMP1-215ENST00000592619 RBMY1DP0C7P1 496 aaKnown RBP4.44□□□□□ -1.7
VMP1-215ENST00000592619 RBMY1A1P0DJD3 496 aaKnown RBP4.44□□□□□ -1.7
VMP1-215ENST00000592619 PRR3P79522 188 aaKnown RBP4.44□□□□□ -1.7
VMP1-215ENST00000592619 CAV1Q03135 178 aa4.44□□□□□ -1.7
VMP1-215ENST00000592619 DEFB133Q30KQ1 61 aa4.44□□□□□ -1.7
VMP1-215ENST00000592619 C12orf74Q32Q52 190 aa4.44□□□□□ -1.7
VMP1-215ENST00000592619 SCGB2B2Q4G0G5 96 aa4.44□□□□□ -1.7
VMP1-215ENST00000592619 GLYATL3Q5SZD4 288 aa4.44□□□□□ -1.7
VMP1-215ENST00000592619 TCF23Q7RTU1 214 aa4.44□□□□□ -1.7
VMP1-215ENST00000592619 SNX29P2Q8IUI4 249 aa4.44□□□□□ -1.7
VMP1-215ENST00000592619 OR9G1Q8NH87 305 aa4.44□□□□□ -1.7
VMP1-215ENST00000592619 TMEM106AQ96A25 262 aa4.44□□□□□ -1.7
VMP1-215ENST00000592619 MGLLQ99685 303 aa4.44□□□□□ -1.7
VMP1-215ENST00000592619 NRIP2Q9BQI9 281 aa4.44□□□□□ -1.7
VMP1-215ENST00000592619 SAMD10Q9BYL1 202 aa4.44□□□□□ -1.7
VMP1-215ENST00000592619 SCN3BQ9NY72 215 aa4.44□□□□□ -1.7
VMP1-215ENST00000592619 CLCF1Q9UBD9 225 aa4.44□□□□□ -1.7
VMP1-215ENST00000592619 WASHC3Q9Y3C0 194 aa4.44□□□□□ -1.7
VMP1-215ENST00000592619 KIF25-AS1Q9Y6Z4 181 aa4.44□□□□□ -1.7
VMP1-215ENST00000592619 SPAARA0A1B0GVQ0 90 aa4.43□□□□□ -1.7
VMP1-215ENST00000592619 PLAC8L1A1L4L8 177 aa4.43□□□□□ -1.7
VMP1-215ENST00000592619 C5orf63A6NC05 138 aa4.43□□□□□ -1.7
VMP1-215ENST00000592619 H0Y9J4 135 aa4.43□□□□□ -1.7
VMP1-215ENST00000592619 I3L521 148 aa4.43□□□□□ -1.7
VMP1-215ENST00000592619 K7EPK0 472 aa4.43□□□□□ -1.7
VMP1-215ENST00000592619 CCL22O00626 93 aa4.43□□□□□ -1.7
VMP1-215ENST00000592619 ZNF682O95780 498 aa4.43□□□□□ -1.7
VMP1-215ENST00000592619 LY6G6DO95868 133 aa4.43□□□□□ -1.7
VMP1-215ENST00000592619 IGKV3-15P01624 115 aa4.43□□□□□ -1.7
VMP1-215ENST00000592619 RPS4Y1P22090 263 aaKnown RBP4.43□□□□□ -1.7
VMP1-215ENST00000592619 RAB5CP51148 216 aa4.43□□□□□ -1.7
VMP1-215ENST00000592619 SLC18A1P54219 525 aa4.43□□□□□ -1.7
VMP1-215ENST00000592619 SNRPD2P62316 118 aaKnown RBP4.43□□□□□ -1.7
VMP1-215ENST00000592619 CRADDP78560 199 aa4.43□□□□□ -1.7
VMP1-215ENST00000592619 HLA-DRB3P79483 266 aa4.43□□□□□ -1.7
VMP1-215ENST00000592619 TMEM267Q0VDI3 215 aaPredicted RBP4.43□□□□□ -1.7
VMP1-215ENST00000592619 ENDOGQ14249 297 aaKnown RBP4.43□□□□□ -1.7
VMP1-215ENST00000592619 CCSMST1Q4G0I0 132 aa4.43□□□□□ -1.7
VMP1-215ENST00000592619 SPANXN3Q5MJ09 141 aa4.43□□□□□ -1.7
VMP1-215ENST00000592619 CNIH2Q6PI25 160 aa4.43□□□□□ -1.7
VMP1-215ENST00000592619 TCTE3Q8IZS6 198 aa4.43□□□□□ -1.7
VMP1-215ENST00000592619 MMGT1Q8N4V1 131 aa4.43□□□□□ -1.7
VMP1-215ENST00000592619 FAM71E2Q8N5Q1 922 aa4.43□□□□□ -1.7
VMP1-215ENST00000592619 CCL4L1Q8NHW4 92 aa4.43□□□□□ -1.7
VMP1-215ENST00000592619 FRZBQ92765 325 aa4.43□□□□□ -1.7
VMP1-215ENST00000592619 GALNT14Q96FL9 552 aa4.43□□□□□ -1.7
VMP1-215ENST00000592619 PRSS27Q9BQR3 290 aa4.43□□□□□ -1.7
VMP1-215ENST00000592619 DEFB127Q9H1M4 99 aa4.43□□□□□ -1.7
VMP1-215ENST00000592619 MED31Q9Y3C7 131 aa4.43□□□□□ -1.7
VMP1-215ENST00000592619 PCYT1BQ9Y5K3 369 aaPredicted RBP4.43□□□□□ -1.7
VMP1-215ENST00000592619 U3KQA8 63 aa4.43□□□□□ -1.7
VMP1-215ENST00000592619 V9GYS6 101 aa4.43□□□□□ -1.7
VMP1-215ENST00000592619 EP300Q09472 2414 aaPredicted RBP4.43□□□□□ -1.7
VMP1-215ENST00000592619 COL27A1Q8IZC6 1860 aaPredicted RBP4.43□□□□□ -1.7
VMP1-215ENST00000592619 RIF1Q5UIP0 2472 aaKnown RBP4.43□□□□□ -1.7
VMP1-215ENST00000592619 TDRD6O60522 2096 aaKnown RBP4.42□□□□□ -1.7
VMP1-215ENST00000592619 SDK1Q7Z5N4 2213 aa4.42□□□□□ -1.7
VMP1-215ENST00000592619 ASCC3Q8N3C0 2202 aaKnown RBP4.42□□□□□ -1.7
VMP1-215ENST00000592619 TRAV8-6A0A0B4J262 113 aa4.42□□□□□ -1.7
VMP1-215ENST00000592619 A0A0G2JN53 185 aa4.42□□□□□ -1.7
VMP1-215ENST00000592619 LOC102725191A0A1B0GVB3 256 aa4.42□□□□□ -1.7
VMP1-215ENST00000592619 OR51F1A6NGY5 319 aa4.42□□□□□ -1.7
VMP1-215ENST00000592619 RIIAD1A6NNX1 92 aa4.42□□□□□ -1.7
VMP1-215ENST00000592619 DNASE2O00115 360 aaPredicted RBP4.42□□□□□ -1.7
VMP1-215ENST00000592619 UPK2O00526 184 aa4.42□□□□□ -1.7
VMP1-215ENST00000592619 CA2P00918 260 aa4.42□□□□□ -1.7
VMP1-215ENST00000592619 CHTF8P0CG12 524 aa4.42□□□□□ -1.7
VMP1-215ENST00000592619 GABRA3P34903 492 aa4.42□□□□□ -1.7
VMP1-215ENST00000592619 GNG4P50150 75 aa4.42□□□□□ -1.7
VMP1-215ENST00000592619 COPZ1P61923 177 aa4.42□□□□□ -1.7
VMP1-215ENST00000592619 FABP5Q01469 135 aa4.42□□□□□ -1.7
VMP1-215ENST00000592619 IFITM3Q01628 133 aa4.42□□□□□ -1.7
VMP1-215ENST00000592619 PSG7Q13046 419 aa4.42□□□□□ -1.7
VMP1-215ENST00000592619 DAZ2Q13117 558 aaKnown RBP4.42□□□□□ -1.7
VMP1-215ENST00000592619 ZNF266Q14584 549 aa4.42□□□□□ -1.7
VMP1-215ENST00000592619 JOSD1Q15040 202 aaPredicted RBP4.42□□□□□ -1.7
VMP1-215ENST00000592619 TMEM241Q24JQ0 296 aa4.42□□□□□ -1.7
VMP1-215ENST00000592619 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.42□□□□□ -1.7
VMP1-215ENST00000592619 GUSBP11Q6P575 273 aa4.42□□□□□ -1.7
VMP1-215ENST00000592619 FBXW12Q6X9E4 464 aa4.42□□□□□ -1.7
VMP1-215ENST00000592619 Q6ZRU5 148 aa4.42□□□□□ -1.7
VMP1-215ENST00000592619 DAZ4Q86SG3 579 aaKnown RBP4.42□□□□□ -1.7
VMP1-215ENST00000592619 SGPP2Q8IWX5 399 aa4.42□□□□□ -1.7
VMP1-215ENST00000592619 OR51T1Q8NGJ9 327 aa4.42□□□□□ -1.7
VMP1-215ENST00000592619 OR5K1Q8NHB7 308 aa4.42□□□□□ -1.7
VMP1-215ENST00000592619 CCL17Q92583 94 aa4.42□□□□□ -1.7
VMP1-215ENST00000592619 NRTNQ99748 197 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms