RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 HIPK2Q9H2X6 1198 aa11.35□□□□□ -0.59
ERCC1-213ENST00000592023 FNDC4Q9H6D8 234 aaPredicted RBP11.35□□□□□ -0.59
ERCC1-213ENST00000592023 EDA2RQ9HAV5 297 aa11.35□□□□□ -0.59
ERCC1-213ENST00000592023 MRPL36Q9P0J6 103 aaKnown RBP11.35□□□□□ -0.59
ERCC1-213ENST00000592023 SMPXQ9UHP9 88 aa11.35□□□□□ -0.59
ERCC1-213ENST00000592023 KCNIP3Q9Y2W7 256 aa11.35□□□□□ -0.59
ERCC1-213ENST00000592023 STAB2Q8WWQ8 2551 aa11.34□□□□□ -0.59
ERCC1-213ENST00000592023 IGHV3OR16-13A0A075B7E8 117 aa11.34□□□□□ -0.59
ERCC1-213ENST00000592023 IGHV3-74A0A0B4J1X5 117 aa11.34□□□□□ -0.59
ERCC1-213ENST00000592023 SUPT4H1P63272 117 aaKnown RBP11.34□□□□□ -0.59
ERCC1-213ENST00000592023 BSXQ3C1V8 233 aa11.34□□□□□ -0.59
ERCC1-213ENST00000592023 TMEM116Q8NCL8 245 aa11.34□□□□□ -0.59
ERCC1-213ENST00000592023 OR10C1Q96KK4 312 aa11.34□□□□□ -0.59
ERCC1-213ENST00000592023 RNF2Q99496 336 aa11.34□□□□□ -0.59
ERCC1-213ENST00000592023 RHPN1-AS1Q9BWJ2 59 aa11.34□□□□□ -0.59
ERCC1-213ENST00000592023 GGTLC1Q9BX51 225 aa11.34□□□□□ -0.59
ERCC1-213ENST00000592023 HEYLQ9NQ87 328 aaPredicted RBP11.34□□□□□ -0.59
ERCC1-213ENST00000592023 IGKV3-7A0A075B6H7 116 aa11.33□□□□□ -0.6
ERCC1-213ENST00000592023 OR4C46A6NHA9 309 aa11.33□□□□□ -0.6
ERCC1-213ENST00000592023 ZNF701M0R085 212 aaPredicted RBP11.33□□□□□ -0.6
ERCC1-213ENST00000592023 CHEK1O14757 476 aa11.33□□□□□ -0.6
ERCC1-213ENST00000592023 SULT1A3P0DMM9 295 aa11.33□□□□□ -0.6
ERCC1-213ENST00000592023 SULT1A4P0DMN0 295 aa11.33□□□□□ -0.6
ERCC1-213ENST00000592023 MLANAQ16655 118 aa11.33□□□□□ -0.6
ERCC1-213ENST00000592023 TOMM20LQ6UXN7 152 aa11.33□□□□□ -0.6
ERCC1-213ENST00000592023 ZNF600Q6ZNG1 722 aa11.33□□□□□ -0.6
ERCC1-213ENST00000592023 SLC24A4Q8NFF2 622 aa11.33□□□□□ -0.6
ERCC1-213ENST00000592023 GINS3Q9BRX5 216 aa11.33□□□□□ -0.6
ERCC1-213ENST00000592023 PUS1Q9Y606 427 aaKnown RBP eCLIP11.33□□□□□ -0.6
ERCC1-213ENST00000592023 TENM3Q9P273 2699 aa11.33□□□□□ -0.6
ERCC1-213ENST00000592023 KMT2CQ8NEZ4 4911 aaKnown RBP11.32□□□□□ -0.6
ERCC1-213ENST00000592023 LOC102724200A0A096LPH7 203 aaPredicted RBP11.32□□□□□ -0.6
ERCC1-213ENST00000592023 TRAV14DV4A0A0A6YYC5 116 aa11.32□□□□□ -0.6
ERCC1-213ENST00000592023 A0A0B4J2A0 478 aa11.32□□□□□ -0.6
ERCC1-213ENST00000592023 TMEM50AO95807 157 aa11.32□□□□□ -0.6
ERCC1-213ENST00000592023 ANXA3P12429 323 aa11.32□□□□□ -0.6
ERCC1-213ENST00000592023 LYL1P12980 280 aa11.32□□□□□ -0.6
ERCC1-213ENST00000592023 HTR2BP41595 481 aa11.32□□□□□ -0.6
ERCC1-213ENST00000592023 TFPI2P48307 235 aa11.32□□□□□ -0.6
ERCC1-213ENST00000592023 SRPXP78539 464 aa11.32□□□□□ -0.6
ERCC1-213ENST00000592023 ODF3L2Q3SX64 289 aa11.32□□□□□ -0.6
ERCC1-213ENST00000592023 SPANXN2Q5MJ10 180 aa11.32□□□□□ -0.6
ERCC1-213ENST00000592023 CASC10Q5T4H9 136 aa11.32□□□□□ -0.6
ERCC1-213ENST00000592023 ZFAND6Q6FIF0 208 aa11.32□□□□□ -0.6
ERCC1-213ENST00000592023 LYZL2Q7Z4W2 148 aa11.32□□□□□ -0.6
ERCC1-213ENST00000592023 LGI3Q8N145 548 aa11.32□□□□□ -0.6
ERCC1-213ENST00000592023 ZFAND3Q9H8U3 227 aa11.32□□□□□ -0.6
ERCC1-213ENST00000592023 SHPKQ9UHJ6 478 aa11.32□□□□□ -0.6
ERCC1-213ENST00000592023 A0A1B0GU03 582 aa11.31□□□□□ -0.6
ERCC1-213ENST00000592023 RPS10-NUDT3A0A1W2PQS6 291 aa11.31□□□□□ -0.6
ERCC1-213ENST00000592023 CLN5O75503 358 aa11.31□□□□□ -0.6
ERCC1-213ENST00000592023 VAMP1P23763 118 aa11.31□□□□□ -0.6
ERCC1-213ENST00000592023 NPY1RP25929 384 aa11.31□□□□□ -0.6
ERCC1-213ENST00000592023 SMCO1Q147U7 214 aa11.31□□□□□ -0.6
ERCC1-213ENST00000592023 NMSQ5H8A3 153 aa11.31□□□□□ -0.6
ERCC1-213ENST00000592023 OR4X1Q8NH49 305 aa11.31□□□□□ -0.6
ERCC1-213ENST00000592023 SRRQ9GZT4 340 aa11.31□□□□□ -0.6
ERCC1-213ENST00000592023 IGHV3-66A0A0C4DH42 116 aa11.3□□□□□ -0.6
ERCC1-213ENST00000592023 SCGB2A1O75556 95 aa11.3□□□□□ -0.6
ERCC1-213ENST00000592023 BMI1P35226 326 aa11.3□□□□□ -0.6
ERCC1-213ENST00000592023 CCR6P51684 374 aa11.3□□□□□ -0.6
ERCC1-213ENST00000592023 RND2P52198 227 aa11.3□□□□□ -0.6
ERCC1-213ENST00000592023 TIGITQ495A1 244 aa11.3□□□□□ -0.6
ERCC1-213ENST00000592023 C2orf83Q53S99 150 aa11.3□□□□□ -0.6
ERCC1-213ENST00000592023 TCF24Q7RTU0 167 aa11.3□□□□□ -0.6
ERCC1-213ENST00000592023 TMEM170AQ8WVE7 144 aa11.3□□□□□ -0.6
ERCC1-213ENST00000592023 ST8SIA2Q92186 375 aa11.3□□□□□ -0.6
ERCC1-213ENST00000592023 APOHP02749 345 aaPredicted RBP11.29□□□□□ -0.6
ERCC1-213ENST00000592023 INPP1P49441 399 aa11.29□□□□□ -0.6
ERCC1-213ENST00000592023 TNFRSF9Q07011 255 aa11.29□□□□□ -0.6
ERCC1-213ENST00000592023 TMEM128Q5BJH2 165 aa11.29□□□□□ -0.6
ERCC1-213ENST00000592023 GBGT1Q8N5D6 347 aa11.29□□□□□ -0.6
ERCC1-213ENST00000592023 OR1S1Q8NH92 325 aa11.29□□□□□ -0.6
ERCC1-213ENST00000592023 RNASEH2CQ8TDP1 164 aaKnown RBP11.29□□□□□ -0.6
ERCC1-213ENST00000592023 DTD1Q8TEA8 209 aa11.29□□□□□ -0.6
ERCC1-213ENST00000592023 RBKSQ9H477 322 aa11.29□□□□□ -0.6
ERCC1-213ENST00000592023 HSPB7Q9UBY9 170 aa11.29□□□□□ -0.6
ERCC1-213ENST00000592023 CACFD1Q9UGQ2 172 aa11.29□□□□□ -0.6
ERCC1-213ENST00000592023 IFNA10P01566 189 aa11.28□□□□□ -0.6
ERCC1-213ENST00000592023 IGKV1-17P01599 117 aa11.28□□□□□ -0.6
ERCC1-213ENST00000592023 TRIQKQ629K1 86 aa11.28□□□□□ -0.6
ERCC1-213ENST00000592023 FAM90A2PQ658T7 463 aa11.28□□□□□ -0.6
ERCC1-213ENST00000592023 PRSS54Q6PEW0 395 aa11.28□□□□□ -0.6
ERCC1-213ENST00000592023 DEDD2Q8WXF8 326 aa11.28□□□□□ -0.6
ERCC1-213ENST00000592023 SLC25A21Q9BQT8 299 aaPredicted RBP11.28□□□□□ -0.6
ERCC1-213ENST00000592023 VSIRQ9H7M9 311 aa11.28□□□□□ -0.6
ERCC1-213ENST00000592023 TRAV30A0A087WSZ9 112 aa11.27□□□□□ -0.61
ERCC1-213ENST00000592023 DUXBA0A1W2PPF3 345 aa11.27□□□□□ -0.61
ERCC1-213ENST00000592023 IGLC1P0CG04 106 aa11.27□□□□□ -0.61
ERCC1-213ENST00000592023 SLC25A4P12235 298 aa11.27□□□□□ -0.61
ERCC1-213ENST00000592023 RPL35AP18077 110 aaKnown RBP11.27□□□□□ -0.61
ERCC1-213ENST00000592023 APOC4P55056 127 aa11.27□□□□□ -0.61
ERCC1-213ENST00000592023 PPP1R1AQ13522 171 aa11.27□□□□□ -0.61
ERCC1-213ENST00000592023 RBMS2Q15434 407 aaKnown RBP11.27□□□□□ -0.61
ERCC1-213ENST00000592023 ZNF124Q15973 351 aa11.27□□□□□ -0.61
ERCC1-213ENST00000592023 BAK1Q16611 211 aa11.27□□□□□ -0.61
ERCC1-213ENST00000592023 WFDC3Q8IUB2 231 aa11.27□□□□□ -0.61
ERCC1-213ENST00000592023 APRG1Q8IVJ8 170 aa11.27□□□□□ -0.61
ERCC1-213ENST00000592023 CENPSQ8N2Z9 138 aa11.27□□□□□ -0.61
ERCC1-213ENST00000592023 LILRB2Q8N423 598 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms