RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 MARCOQ9UEW3 520 aaPredicted RBP2.65□□□□□ -1.99
VMP1-212ENST00000591782 LSM7Q9UK45 103 aaKnown RBP2.65□□□□□ -1.99
VMP1-212ENST00000591782 PKIGQ9Y2B9 76 aa2.65□□□□□ -1.99
VMP1-212ENST00000591782 SPCS1Q9Y6A9 102 aa2.65□□□□□ -1.99
VMP1-212ENST00000591782 HELZP42694 1942 aaKnown RBP2.65□□□□□ -1.99
VMP1-212ENST00000591782 C5P01031 1676 aa2.65□□□□□ -1.99
VMP1-212ENST00000591782 ALS2Q96Q42 1657 aa2.65□□□□□ -1.99
VMP1-212ENST00000591782 LAMA4Q16363 1823 aa2.65□□□□□ -1.99
VMP1-212ENST00000591782 FANCMQ8IYD8 2048 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 SIPA1L3O60292 1781 aaPredicted RBP2.64□□□□□ -1.99
VMP1-212ENST00000591782 RLFQ13129 1914 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 MYLKQ15746 1914 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 MCM3APO60318 1980 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 A0A087X0T9 212 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 SMIM28A0A1B0GU29 152 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 LOC102725191A0A1B0GVB3 256 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 FAM240AA0A1B0GVK7 77 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 LOC285095A0A1B0GVY8 99 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 A0A1B0GWB2 263 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 TCRBV9S1A1TA0A576 114 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 OR2T8A6NH00 312 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 GABARAPH6UMI1 98 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 TAX1BP3O14907 124 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 UQCRQO14949 82 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 GSTZ1O43708 216 aaPredicted RBP2.64□□□□□ -1.99
VMP1-212ENST00000591782 HYPMO75409 117 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 KLF7O75840 302 aaPredicted RBP2.64□□□□□ -1.99
VMP1-212ENST00000591782 UBL3O95164 117 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 HRASP01112 189 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 KRASP01116 189 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 CD8AP01732 235 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 HSPB1P04792 205 aaKnown RBP2.64□□□□□ -1.99
VMP1-212ENST00000591782 LGALS1P09382 135 aaKnown RBP2.64□□□□□ -1.99
VMP1-212ENST00000591782 PIPP12273 146 aaPredicted RBP2.64□□□□□ -1.99
VMP1-212ENST00000591782 CPMP14384 443 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 CXCL3P19876 107 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 RND2P52198 227 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 FBXW4P57775 412 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 PFN3P60673 137 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 RPL18AQ02543 176 aaKnown RBP2.64□□□□□ -1.99
VMP1-212ENST00000591782 PMAIP1Q13794 54 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 CD226Q15762 336 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 MSMO1Q15800 293 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 CEACAM16Q2WEN9 425 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 VMA21Q3ZAQ7 101 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 PSMG4Q5JS54 123 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 C1orf220Q5T0J3 134 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 IBA57Q5T440 356 aaKnown RBP2.64□□□□□ -1.99
VMP1-212ENST00000591782 SPATA31B1PQ5VZV4 182 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 AMTNQ6UX39 209 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 SCGB1D4Q6XE38 83 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 Q6ZUT4 128 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 FAM19A1Q7Z5A9 133 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 ZNF429Q86V71 674 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 ANKRD29Q8N6D5 301 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 ZNF433Q8N7K0 673 aaPredicted RBP2.64□□□□□ -1.99
VMP1-212ENST00000591782 ZNF615Q8N8J6 731 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 OR2T33Q8NG76 320 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 OR9G1Q8NH87 305 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 FRZBQ92765 325 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 TMEM54Q969K7 222 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 SEC22AQ96IW7 307 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 AGMATQ9BSE5 352 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 EMC6Q9BV81 110 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 TMEM147Q9BVK8 224 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 TMEM59Q9BXS4 323 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 COMMD5Q9GZQ3 224 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 GABARAPL1Q9H0R8 117 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 VSIRQ9H7M9 311 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 REEP1Q9H902 201 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 RBM22Q9NW64 420 aaKnown RBP eCLIP2.64□□□□□ -1.998e-63■■■■■ 27.1
VMP1-212ENST00000591782 ZNF257Q9Y2Q1 563 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 KLF13Q9Y2Y9 288 aaPredicted RBP2.64□□□□□ -1.99
VMP1-212ENST00000591782 INSIG2Q9Y5U4 225 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 MPC1Q9Y5U8 109 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 MON2Q7Z3U7 1717 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 CUL9Q8IWT3 2517 aa2.64□□□□□ -1.99
VMP1-212ENST00000591782 CCDC88CQ9P219 2028 aa2.63□□□□□ -1.99
VMP1-212ENST00000591782 TECPR2O15040 1411 aa2.63□□□□□ -1.99
VMP1-212ENST00000591782 hCG_1818297A0A087WSY0 165 aa2.63□□□□□ -1.99
VMP1-212ENST00000591782 C3orf85A0A1B0GTC6 90 aa2.63□□□□□ -1.99
VMP1-212ENST00000591782 FAM236DA0A1B0GTK5 79 aa2.63□□□□□ -1.99
VMP1-212ENST00000591782 ODAMA1E959 279 aa2.63□□□□□ -1.99
VMP1-212ENST00000591782 TLCD2A6NGC4 264 aa2.63□□□□□ -1.99
VMP1-212ENST00000591782 A8MT66 165 aa2.63□□□□□ -1.99
VMP1-212ENST00000591782 APOC4-APOC2K7ER74 178 aa2.63□□□□□ -1.99
VMP1-212ENST00000591782 M0R1B8 84 aa2.63□□□□□ -1.99
VMP1-212ENST00000591782 OVOL1O14753 267 aa2.63□□□□□ -1.99
VMP1-212ENST00000591782 SH2D1BO14796 132 aa2.63□□□□□ -1.99
VMP1-212ENST00000591782 ZNF253O75346 499 aa2.63□□□□□ -1.99
VMP1-212ENST00000591782 APOMO95445 188 aa2.63□□□□□ -1.99
VMP1-212ENST00000591782 CXorf1O96002 111 aa2.63□□□□□ -1.99
VMP1-212ENST00000591782 NAPSAO96009 420 aa2.63□□□□□ -1.99
VMP1-212ENST00000591782 P01737 135 aa2.63□□□□□ -1.99
VMP1-212ENST00000591782 APOC2P02655 101 aa2.63□□□□□ -1.99
VMP1-212ENST00000591782 REG1AP05451 166 aa2.63□□□□□ -1.99
VMP1-212ENST00000591782 EIF4EP06730 217 aaKnown RBP2.63□□□□□ -1.99
VMP1-212ENST00000591782 FAM236CP0DP71 79 aa2.63□□□□□ -1.99
VMP1-212ENST00000591782 PTHLHP12272 177 aa2.63□□□□□ -1.99
VMP1-212ENST00000591782 CSRP1P21291 193 aaKnown RBP2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms