RNA–Protein interactions for RNA: ENST00000591304.1

CLPTM1-212, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-212ENST00000591304 IGHV3-48P01763 117 aa17.45■□□□□ 0.38
CLPTM1-212ENST00000591304 BMI1P35226 326 aa17.45■□□□□ 0.38
CLPTM1-212ENST00000591304 OPRK1P41145 380 aa17.45■□□□□ 0.38
CLPTM1-212ENST00000591304 CCR6P51684 374 aa17.45■□□□□ 0.38
CLPTM1-212ENST00000591304 SUPT4H1P63272 117 aaKnown RBP17.45■□□□□ 0.38
CLPTM1-212ENST00000591304 HIPK2Q9H2X6 1198 aa17.45■□□□□ 0.38
CLPTM1-212ENST00000591304 SRD5A3Q9H8P0 318 aa17.45■□□□□ 0.38
CLPTM1-212ENST00000591304 SMPXQ9UHP9 88 aa17.45■□□□□ 0.38
CLPTM1-212ENST00000591304 SELENOKQ9Y6D0 94 aa17.45■□□□□ 0.38
CLPTM1-212ENST00000591304 STAB2Q8WWQ8 2551 aa17.45■□□□□ 0.38
CLPTM1-212ENST00000591304 TRAV14DV4A0A0A6YYC5 116 aa17.44■□□□□ 0.38
CLPTM1-212ENST00000591304 RPS10-NUDT3A0A1W2PQS6 291 aa17.44■□□□□ 0.38
CLPTM1-212ENST00000591304 CEBPZOSA8MTT3 80 aa17.44■□□□□ 0.38
CLPTM1-212ENST00000591304 C3orf84H3BNL1 204 aa17.44■□□□□ 0.38
CLPTM1-212ENST00000591304 HUWE1Q7Z6Z7 4374 aaKnown RBP17.43■□□□□ 0.38
CLPTM1-212ENST00000591304 IGHV7-4-1A0A0J9YVY3 117 aa17.43■□□□□ 0.38
CLPTM1-212ENST00000591304 DUXBA0A1W2PPF3 345 aa17.43■□□□□ 0.38
CLPTM1-212ENST00000591304 TMEM50AO95807 157 aa17.43■□□□□ 0.38
CLPTM1-212ENST00000591304 CD5P06127 495 aa17.43■□□□□ 0.38
CLPTM1-212ENST00000591304 INPP1P49441 399 aa17.43■□□□□ 0.38
CLPTM1-212ENST00000591304 C2orf83Q53S99 150 aa17.43■□□□□ 0.38
CLPTM1-212ENST00000591304 ZNF600Q6ZNG1 722 aa17.43■□□□□ 0.38
CLPTM1-212ENST00000591304 TMED4Q7Z7H5 227 aa17.43■□□□□ 0.38
CLPTM1-212ENST00000591304 TMEM116Q8NCL8 245 aa17.43■□□□□ 0.38
CLPTM1-212ENST00000591304 OR4X1Q8NH49 305 aa17.43■□□□□ 0.38
CLPTM1-212ENST00000591304 RNASEH2CQ8TDP1 164 aaKnown RBP17.43■□□□□ 0.38
CLPTM1-212ENST00000591304 SRRQ9GZT4 340 aa17.43■□□□□ 0.38
CLPTM1-212ENST00000591304 IGHV3OR16-8A0A075B7F1 116 aa17.42■□□□□ 0.38
CLPTM1-212ENST00000591304 TRAV30A0A087WSZ9 112 aa17.42■□□□□ 0.38
CLPTM1-212ENST00000591304 ZNF207O43670 478 aaKnown RBP17.42■□□□□ 0.38
CLPTM1-212ENST00000591304 SMCO1Q147U7 214 aa17.42■□□□□ 0.38
CLPTM1-212ENST00000591304 NMSQ5H8A3 153 aa17.42■□□□□ 0.38
CLPTM1-212ENST00000591304 SLC24A4Q8NFF2 622 aa17.42■□□□□ 0.38
CLPTM1-212ENST00000591304 CITED4Q96RK1 184 aa17.42■□□□□ 0.38
CLPTM1-212ENST00000591304 OR4C46A6NHA9 309 aa17.41■□□□□ 0.38
CLPTM1-212ENST00000591304 CLN5O75503 358 aa17.41■□□□□ 0.38
CLPTM1-212ENST00000591304 LYZL2Q7Z4W2 148 aa17.41■□□□□ 0.38
CLPTM1-212ENST00000591304 RHPN1-AS1Q9BWJ2 59 aa17.41■□□□□ 0.38
CLPTM1-212ENST00000591304 A0A1B0GU03 582 aa17.4■□□□□ 0.38
CLPTM1-212ENST00000591304 RBMY1BA6NDE4 496 aaKnown RBP17.4■□□□□ 0.38
CLPTM1-212ENST00000591304 RBMY1EA6NEQ0 496 aaKnown RBP17.4■□□□□ 0.38
CLPTM1-212ENST00000591304 NAP1L6A6NFF2 107 aa17.4■□□□□ 0.38
CLPTM1-212ENST00000591304 CHEK1O14757 476 aa17.4■□□□□ 0.38
CLPTM1-212ENST00000591304 RBMY1DP0C7P1 496 aaKnown RBP17.4■□□□□ 0.38
CLPTM1-212ENST00000591304 SLC25A4P12235 298 aa17.4■□□□□ 0.38
CLPTM1-212ENST00000591304 ATP5IP56385 69 aaPredicted RBP17.4■□□□□ 0.38
CLPTM1-212ENST00000591304 TNFRSF9Q07011 255 aa17.4■□□□□ 0.38
CLPTM1-212ENST00000591304 RBMS2Q15434 407 aaKnown RBP17.4■□□□□ 0.38
CLPTM1-212ENST00000591304 TRIQKQ629K1 86 aa17.4■□□□□ 0.38
CLPTM1-212ENST00000591304 ETFRF1Q6IPR1 90 aa17.4■□□□□ 0.38
CLPTM1-212ENST00000591304 TOMM20LQ6UXN7 152 aa17.4■□□□□ 0.38
CLPTM1-212ENST00000591304 ZNF414Q96IQ9 312 aa17.4■□□□□ 0.38
CLPTM1-212ENST00000591304 FAM110AQ9BQ89 295 aa17.4■□□□□ 0.38
CLPTM1-212ENST00000591304 WFDC10AQ9H1F0 79 aa17.4■□□□□ 0.38
CLPTM1-212ENST00000591304 FNDC4Q9H6D8 234 aaPredicted RBP17.4■□□□□ 0.38
CLPTM1-212ENST00000591304 PRR13Q9NZ81 148 aa17.4■□□□□ 0.38
CLPTM1-212ENST00000591304 HSPB7Q9UBY9 170 aa17.4■□□□□ 0.38
CLPTM1-212ENST00000591304 U3KQ87 197 aa17.4■□□□□ 0.38
CLPTM1-212ENST00000591304 CMC4P56277 68 aaPredicted RBP17.39■□□□□ 0.37
CLPTM1-212ENST00000591304 LRTM2Q8N967 370 aa17.39■□□□□ 0.37
CLPTM1-212ENST00000591304 MUC7Q8TAX7 377 aa17.39■□□□□ 0.37
CLPTM1-212ENST00000591304 PUS1Q9Y606 427 aaKnown RBP eCLIP17.39■□□□□ 0.37
CLPTM1-212ENST00000591304 VAMP1P23763 118 aa17.38■□□□□ 0.37
CLPTM1-212ENST00000591304 CENPSQ8N2Z9 138 aa17.38■□□□□ 0.37
CLPTM1-212ENST00000591304 RNF2Q99496 336 aa17.38■□□□□ 0.37
CLPTM1-212ENST00000591304 TMEM231Q9H6L2 316 aa17.38■□□□□ 0.37
CLPTM1-212ENST00000591304 LOC102724200A0A096LPH7 203 aaPredicted RBP17.37■□□□□ 0.37
CLPTM1-212ENST00000591304 NPY1RP25929 384 aa17.37■□□□□ 0.37
CLPTM1-212ENST00000591304 UBE2MP61081 183 aaKnown RBP17.37■□□□□ 0.37
CLPTM1-212ENST00000591304 PAFAH1B2P68402 229 aa17.37■□□□□ 0.37
CLPTM1-212ENST00000591304 OR1S1Q8NH92 325 aa17.37■□□□□ 0.37
CLPTM1-212ENST00000591304 GGTLC1Q9BX51 225 aa17.37■□□□□ 0.37
CLPTM1-212ENST00000591304 ZFAND3Q9H8U3 227 aa17.37■□□□□ 0.37
CLPTM1-212ENST00000591304 TMED3Q9Y3Q3 217 aa17.37■□□□□ 0.37
CLPTM1-212ENST00000591304 A0A1W2PS18 150 aa17.36■□□□□ 0.37
CLPTM1-212ENST00000591304 CENPXA8MT69 81 aa17.36■□□□□ 0.37
CLPTM1-212ENST00000591304 IFNA10P01566 189 aa17.36■□□□□ 0.37
CLPTM1-212ENST00000591304 SLC25A6P12236 298 aa17.36■□□□□ 0.37
CLPTM1-212ENST00000591304 MLANAQ16655 118 aa17.36■□□□□ 0.37
CLPTM1-212ENST00000591304 DTD1Q8TEA8 209 aa17.36■□□□□ 0.37
CLPTM1-212ENST00000591304 NXPH3O95157 252 aa17.35■□□□□ 0.37
CLPTM1-212ENST00000591304 SFT2D2O95562 160 aa17.35■□□□□ 0.37
CLPTM1-212ENST00000591304 NPPCP23582 126 aa17.35■□□□□ 0.37
CLPTM1-212ENST00000591304 BAK1Q16611 211 aa17.35■□□□□ 0.37
CLPTM1-212ENST00000591304 OR1S2Q8NGQ3 325 aa17.35■□□□□ 0.37
CLPTM1-212ENST00000591304 VSIRQ9H7M9 311 aa17.35■□□□□ 0.37
CLPTM1-212ENST00000591304 MRPL36Q9P0J6 103 aaKnown RBP17.35■□□□□ 0.37
CLPTM1-212ENST00000591304 IGHV3-49A0A0A0MS15 119 aa17.34■□□□□ 0.37
CLPTM1-212ENST00000591304 FAM90A2PQ658T7 463 aa17.34■□□□□ 0.37
CLPTM1-212ENST00000591304 PRSS54Q6PEW0 395 aa17.34■□□□□ 0.37
CLPTM1-212ENST00000591304 NARS2Q96I59 477 aaKnown RBP17.34■□□□□ 0.37
CLPTM1-212ENST00000591304 METTL26Q96S19 204 aa17.34■□□□□ 0.37
CLPTM1-212ENST00000591304 C7orf50Q9BRJ6 194 aaKnown RBP17.34■□□□□ 0.37
CLPTM1-212ENST00000591304 RBKSQ9H477 322 aa17.34■□□□□ 0.37
CLPTM1-212ENST00000591304 EDA2RQ9HAV5 297 aa17.34■□□□□ 0.37
CLPTM1-212ENST00000591304 NBEAL2Q6ZNJ1 2754 aa17.33■□□□□ 0.36
CLPTM1-212ENST00000591304 FAM90A26D6RGX4 464 aa17.33■□□□□ 0.36
CLPTM1-212ENST00000591304 LYL1P12980 280 aa17.33■□□□□ 0.36
CLPTM1-212ENST00000591304 RND2P52198 227 aa17.33■□□□□ 0.36
CLPTM1-212ENST00000591304 YPEL3P61236 119 aaPredicted RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms