RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 RNASE1P07998 156 aaKnown RBP5.12□□□□□ -1.59
SMAD4-212ENST00000591126 HTN3P15516 51 aa5.12□□□□□ -1.59
SMAD4-212ENST00000591126 DAD1P61803 113 aa5.12□□□□□ -1.59
SMAD4-212ENST00000591126 ZNF345Q14585 488 aa5.12□□□□□ -1.59
SMAD4-212ENST00000591126 ST6GAL2Q96JF0 529 aa5.12□□□□□ -1.59
SMAD4-212ENST00000591126 SOX21Q9Y651 276 aaPredicted RBP5.12□□□□□ -1.59
SMAD4-212ENST00000591126 C7orf66A4D0T2 115 aa5.11□□□□□ -1.59
SMAD4-212ENST00000591126 C11orf94C9JXX5 98 aa5.11□□□□□ -1.59
SMAD4-212ENST00000591126 TMEM262E9PQX1 116 aa5.11□□□□□ -1.59
SMAD4-212ENST00000591126 RHODO00212 210 aa5.11□□□□□ -1.59
SMAD4-212ENST00000591126 ADAM10O14672 748 aa5.11□□□□□ -1.59
SMAD4-212ENST00000591126 LY6G6DO95868 133 aa5.11□□□□□ -1.59
SMAD4-212ENST00000591126 HOXB4P17483 251 aaPredicted RBP5.11□□□□□ -1.59
SMAD4-212ENST00000591126 EGR1P18146 543 aa5.11□□□□□ -1.59
SMAD4-212ENST00000591126 TMEM255AQ5JRV8 349 aa5.11□□□□□ -1.59
SMAD4-212ENST00000591126 Q6P435 159 aa5.11□□□□□ -1.59
SMAD4-212ENST00000591126 ZNF833PQ6ZTB9 187 aa5.11□□□□□ -1.59
SMAD4-212ENST00000591126 SLC7A5P1Q8MH63 180 aa5.11□□□□□ -1.59
SMAD4-212ENST00000591126 OR11H1Q8NG94 326 aa5.11□□□□□ -1.59
SMAD4-212ENST00000591126 OR4D5Q8NGN0 318 aa5.11□□□□□ -1.59
SMAD4-212ENST00000591126 PRSS3P2Q8NHM4 247 aa5.11□□□□□ -1.59
SMAD4-212ENST00000591126 NPDC1Q9NQX5 325 aaPredicted RBP5.11□□□□□ -1.59
SMAD4-212ENST00000591126 RP1P56715 2156 aa5.11□□□□□ -1.59
SMAD4-212ENST00000591126 ZNF439Q8NDP4 499 aa5.11□□□□□ -1.59
SMAD4-212ENST00000591126 MYOZ3Q8TDC0 251 aa5.11□□□□□ -1.59
SMAD4-212ENST00000591126 TAF15Q92804 592 aaKnown RBP eCLIP5.11□□□□□ -1.59
SMAD4-212ENST00000591126 FUT9Q9Y231 359 aa5.11□□□□□ -1.59
SMAD4-212ENST00000591126 TOMM40O96008 361 aa5.11□□□□□ -1.59
SMAD4-212ENST00000591126 PRSS2P07478 247 aa5.11□□□□□ -1.59
SMAD4-212ENST00000591126 PRNTQ86SH4 94 aa5.11□□□□□ -1.59
SMAD4-212ENST00000591126 C11orf44Q8N8P7 122 aa5.11□□□□□ -1.59
SMAD4-212ENST00000591126 RNF167Q9H6Y7 350 aa5.11□□□□□ -1.59
SMAD4-212ENST00000591126 ZFP30Q9Y2G7 519 aa5.11□□□□□ -1.59
SMAD4-212ENST00000591126 CACNA1GO43497 2377 aa5.11□□□□□ -1.59
SMAD4-212ENST00000591126 GPR179Q6PRD1 2367 aa5.11□□□□□ -1.59
SMAD4-212ENST00000591126 LOC102724200A0A096LPH7 203 aaPredicted RBP5.11□□□□□ -1.59
SMAD4-212ENST00000591126 G3V3Q6 166 aa5.11□□□□□ -1.59
SMAD4-212ENST00000591126 SRSF10O75494 262 aaKnown RBP5.11□□□□□ -1.59
SMAD4-212ENST00000591126 RUSC1-AS1Q66K80 236 aa5.11□□□□□ -1.59
SMAD4-212ENST00000591126 LINC00305Q7Z4B0 112 aa5.11□□□□□ -1.59
SMAD4-212ENST00000591126 TMEM252Q8N6L7 170 aa5.11□□□□□ -1.59
SMAD4-212ENST00000591126 CYB561D1Q8N8Q1 229 aa5.11□□□□□ -1.59
SMAD4-212ENST00000591126 OR8A1Q8NGG7 326 aa5.11□□□□□ -1.59
SMAD4-212ENST00000591126 C2orf88Q9BSF0 95 aa5.11□□□□□ -1.59
SMAD4-212ENST00000591126 MARVELD1Q9BSK0 173 aa5.11□□□□□ -1.59
SMAD4-212ENST00000591126 MAP1LC3CQ9BXW4 147 aa5.11□□□□□ -1.59
SMAD4-212ENST00000591126 NAA50Q9GZZ1 169 aaKnown RBP5.11□□□□□ -1.59
SMAD4-212ENST00000591126 INTS1Q8N201 2190 aaKnown RBP5.1□□□□□ -1.59
SMAD4-212ENST00000591126 DENND4AQ7Z401 1863 aa5.1□□□□□ -1.59
SMAD4-212ENST00000591126 IGHV3-21A0A0B4J1V1 117 aa5.1□□□□□ -1.59
SMAD4-212ENST00000591126 NAPSAO96009 420 aa5.1□□□□□ -1.59
SMAD4-212ENST00000591126 NBEAP1P0C6P0 100 aa5.1□□□□□ -1.59
SMAD4-212ENST00000591126 TGFBR1P36897 503 aa5.1□□□□□ -1.59
SMAD4-212ENST00000591126 HILS1P60008 231 aa5.1□□□□□ -1.59
SMAD4-212ENST00000591126 MRAPQ8TCY5 172 aa5.1□□□□□ -1.59
SMAD4-212ENST00000591126 C4orf3Q8WVX3 66 aa5.1□□□□□ -1.59
SMAD4-212ENST00000591126 NOL4LQ96MY1 436 aaPredicted RBP5.1□□□□□ -1.59
SMAD4-212ENST00000591126 RCHY1Q96PM5 261 aa5.1□□□□□ -1.59
SMAD4-212ENST00000591126 MIEN1Q9BRT3 115 aa5.1□□□□□ -1.59
SMAD4-212ENST00000591126 ZNRD1Q9P1U0 126 aa5.1□□□□□ -1.59
SMAD4-212ENST00000591126 CCDC88CQ9P219 2028 aa5.1□□□□□ -1.59
SMAD4-212ENST00000591126 LINC00587B1AMM8 73 aa5.1□□□□□ -1.59
SMAD4-212ENST00000591126 SCO1O75880 301 aa5.1□□□□□ -1.59
SMAD4-212ENST00000591126 GCGP01275 180 aa5.1□□□□□ -1.59
SMAD4-212ENST00000591126 GRNP28799 593 aaKnown RBP5.1□□□□□ -1.59
SMAD4-212ENST00000591126 RPL29P47914 159 aaKnown RBP5.1□□□□□ -1.59
SMAD4-212ENST00000591126 FGF8P55075 233 aaPredicted RBP5.1□□□□□ -1.59
SMAD4-212ENST00000591126 SRSF2Q01130 221 aaKnown RBP5.1□□□□□ -1.59
SMAD4-212ENST00000591126 PDE6HQ13956 83 aa5.1□□□□□ -1.59
SMAD4-212ENST00000591126 CIRBPQ14011 172 aaKnown RBP5.1□□□□□ -1.59
SMAD4-212ENST00000591126 LYRM7Q5U5X0 104 aa5.1□□□□□ -1.59
SMAD4-212ENST00000591126 HS3ST6Q96QI5 342 aa5.1□□□□□ -1.59
SMAD4-212ENST00000591126 KLHDC3Q9BQ90 382 aa5.1□□□□□ -1.59
SMAD4-212ENST00000591126 CD8AP01732 235 aa5.1□□□□□ -1.59
SMAD4-212ENST00000591126 TUSC1Q2TAM9 212 aa5.1□□□□□ -1.59
SMAD4-212ENST00000591126 XAF1Q6GPH4 301 aa5.1□□□□□ -1.59
SMAD4-212ENST00000591126 OR10G8Q8NGN5 311 aa5.1□□□□□ -1.59
SMAD4-212ENST00000591126 PIEZO1Q92508 2521 aa5.1□□□□□ -1.59
SMAD4-212ENST00000591126 SPATA25Q9BR10 227 aa5.1□□□□□ -1.59
SMAD4-212ENST00000591126 RHPN1-AS1Q9BWJ2 59 aa5.1□□□□□ -1.59
SMAD4-212ENST00000591126 PLSCR3Q9NRY6 295 aa5.1□□□□□ -1.59
SMAD4-212ENST00000591126 TEX50A0A1B0GTY4 177 aa5.09□□□□□ -1.59
SMAD4-212ENST00000591126 FABP5P3A8MUU1 101 aa5.09□□□□□ -1.59
SMAD4-212ENST00000591126 SIX6O95475 246 aa5.09□□□□□ -1.59
SMAD4-212ENST00000591126 MT-ND6P03923 174 aa5.09□□□□□ -1.59
SMAD4-212ENST00000591126 ZNF688P0C7X2 276 aa5.09□□□□□ -1.59
SMAD4-212ENST00000591126 GP9P14770 177 aa5.09□□□□□ -1.59
SMAD4-212ENST00000591126 GUSBP1Q15486 140 aa5.09□□□□□ -1.59
SMAD4-212ENST00000591126 ZNF56Q15929 161 aa5.09□□□□□ -1.59
SMAD4-212ENST00000591126 SLIRPQ9GZT3 109 aaKnown RBP5.09□□□□□ -1.59
SMAD4-212ENST00000591126 CENPVL3A0A0U1RRI6 287 aa5.09□□□□□ -1.59
SMAD4-212ENST00000591126 H3BRM9 83 aa5.09□□□□□ -1.59
SMAD4-212ENST00000591126 CLDN34H7C241 214 aa5.09□□□□□ -1.59
SMAD4-212ENST00000591126 REG1AP05451 166 aa5.09□□□□□ -1.59
SMAD4-212ENST00000591126 CD81P60033 236 aa5.09□□□□□ -1.59
SMAD4-212ENST00000591126 RPL36AP83881 106 aaKnown RBP5.09□□□□□ -1.59
SMAD4-212ENST00000591126 HAGHQ16775 308 aa5.09□□□□□ -1.59
SMAD4-212ENST00000591126 Q6YL49 198 aa5.09□□□□□ -1.59
SMAD4-212ENST00000591126 ZNF493Q6ZR52 646 aa5.09□□□□□ -1.59
SMAD4-212ENST00000591126 MAPK1IP1LQ8NDC0 245 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms