RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 EXOSC2Q13868 293 aaKnown RBP13.69□□□□□ -0.22
VAT1-208ENST00000590924 SLC24A4Q8NFF2 622 aa13.69□□□□□ -0.22
VAT1-208ENST00000590924 MUC7Q8TAX7 377 aa13.69□□□□□ -0.22
VAT1-208ENST00000590924 RNASEH2CQ8TDP1 164 aaKnown RBP13.69□□□□□ -0.22
VAT1-208ENST00000590924 ELOVL1Q9BW60 279 aa13.69□□□□□ -0.22
VAT1-208ENST00000590924 PEF1Q9UBV8 284 aaKnown RBP13.69□□□□□ -0.22
VAT1-208ENST00000590924 ALG5Q9Y673 324 aa13.69□□□□□ -0.22
VAT1-208ENST00000590924 WRBO00258 174 aa13.68□□□□□ -0.22
VAT1-208ENST00000590924 NPY1RP25929 384 aa13.68□□□□□ -0.22
VAT1-208ENST00000590924 I3L2K1 104 aa13.67□□□□□ -0.22
VAT1-208ENST00000590924 K7EIM0 57 aa13.67□□□□□ -0.22
VAT1-208ENST00000590924 IFNA10P01566 189 aa13.67□□□□□ -0.22
VAT1-208ENST00000590924 FCGR2BP31994 310 aaPredicted RBP13.67□□□□□ -0.22
VAT1-208ENST00000590924 TAS2R30P59541 319 aa13.67□□□□□ -0.22
VAT1-208ENST00000590924 ZNF502Q8TBZ5 544 aa13.67□□□□□ -0.22
VAT1-208ENST00000590924 SCARB1Q8WTV0 552 aa13.67□□□□□ -0.22
VAT1-208ENST00000590924 MISP3Q96FF7 219 aa13.67□□□□□ -0.22
VAT1-208ENST00000590924 SMIM8Q96KF7 97 aa13.67□□□□□ -0.22
VAT1-208ENST00000590924 RAB40CQ96S21 281 aa13.67□□□□□ -0.22
VAT1-208ENST00000590924 TXN2Q99757 166 aa13.67□□□□□ -0.22
VAT1-208ENST00000590924 NMES1Q9C002 83 aa13.67□□□□□ -0.22
VAT1-208ENST00000590924 MAGT1Q9H0U3 335 aa13.67□□□□□ -0.22
VAT1-208ENST00000590924 ZMAT4Q9H898 229 aa13.67□□□□□ -0.22
VAT1-208ENST00000590924 GAR1Q9NY12 217 aaKnown RBP13.67□□□□□ -0.22
VAT1-208ENST00000590924 GOSR2O14653 212 aa13.66□□□□□ -0.22
VAT1-208ENST00000590924 MBPP02686 304 aaPredicted RBP13.66□□□□□ -0.22
VAT1-208ENST00000590924 POLR2GP62487 172 aaKnown RBP eCLIP13.66□□□□□ -0.22
VAT1-208ENST00000590924 DEFA5Q01523 94 aa13.66□□□□□ -0.22
VAT1-208ENST00000590924 CASC10Q5T4H9 136 aa13.66□□□□□ -0.22
VAT1-208ENST00000590924 HAPLN4Q86UW8 402 aa13.66□□□□□ -0.22
VAT1-208ENST00000590924 C21orf62Q9NYP8 219 aa13.66□□□□□ -0.22
VAT1-208ENST00000590924 RPS10-NUDT3A0A1W2PQS6 291 aa13.65□□□□□ -0.22
VAT1-208ENST00000590924 ANKRD34BA5PLL1 514 aa13.65□□□□□ -0.22
VAT1-208ENST00000590924 MFSD2BA6NFX1 497 aa13.65□□□□□ -0.22
VAT1-208ENST00000590924 A8MZ25 164 aa13.65□□□□□ -0.22
VAT1-208ENST00000590924 MT-CO2P00403 227 aa13.65□□□□□ -0.22
VAT1-208ENST00000590924 MFAP4P55083 255 aa13.65□□□□□ -0.22
VAT1-208ENST00000590924 RAB11AP62491 216 aa13.65□□□□□ -0.22
VAT1-208ENST00000590924 KLF5Q13887 457 aaPredicted RBP13.65□□□□□ -0.22
VAT1-208ENST00000590924 ETFRF1Q6IPR1 90 aa13.65□□□□□ -0.22
VAT1-208ENST00000590924 Q8N1Y9 231 aa13.65□□□□□ -0.22
VAT1-208ENST00000590924 OR9G4Q8NGQ1 327 aa13.65□□□□□ -0.22
VAT1-208ENST00000590924 TMEM170AQ8WVE7 144 aa13.65□□□□□ -0.22
VAT1-208ENST00000590924 CCDC140Q96MF4 163 aa13.65□□□□□ -0.22
VAT1-208ENST00000590924 TM2D3Q9BRN9 247 aa13.65□□□□□ -0.22
VAT1-208ENST00000590924 DYNC2H1Q8NCM8 4307 aaKnown RBP13.65□□□□□ -0.22
VAT1-208ENST00000590924 SCGB1D2O95969 90 aa13.64□□□□□ -0.23
VAT1-208ENST00000590924 CLEC3BP05452 202 aa13.64□□□□□ -0.23
VAT1-208ENST00000590924 IGHV4-30-4P0DP06 118 aa13.64□□□□□ -0.23
VAT1-208ENST00000590924 IAPPP10997 89 aa13.64□□□□□ -0.23
VAT1-208ENST00000590924 SPSB3Q6PJ21 355 aa13.64□□□□□ -0.23
VAT1-208ENST00000590924 MED28Q9H204 178 aa13.64□□□□□ -0.23
VAT1-208ENST00000590924 MGAT4CQ9UBM8 478 aa13.64□□□□□ -0.23
VAT1-208ENST00000590924 STRAPQ9Y3F4 350 aaKnown RBP13.64□□□□□ -0.23
VAT1-208ENST00000590924 C15orf62A8K5M9 175 aa13.63□□□□□ -0.23
VAT1-208ENST00000590924 SSSCA1O60232 199 aa13.63□□□□□ -0.23
VAT1-208ENST00000590924 TSC22D2O75157 780 aa13.63□□□□□ -0.23
VAT1-208ENST00000590924 GGCTO75223 188 aaKnown RBP13.63□□□□□ -0.23
VAT1-208ENST00000590924 SIX6O95475 246 aa13.63□□□□□ -0.23
VAT1-208ENST00000590924 SLC25A4P12235 298 aa13.63□□□□□ -0.23
VAT1-208ENST00000590924 GPX4P36969 197 aaPredicted RBP13.63□□□□□ -0.23
VAT1-208ENST00000590924 NPBWR1P48145 328 aa13.63□□□□□ -0.23
VAT1-208ENST00000590924 PAX9P55771 341 aa13.63□□□□□ -0.23
VAT1-208ENST00000590924 H2BFSP57053 126 aa13.63□□□□□ -0.23
VAT1-208ENST00000590924 CLEC19AQ6UXS0 136 aa13.63□□□□□ -0.23
VAT1-208ENST00000590924 CACNG8Q8WXS5 425 aa13.63□□□□□ -0.23
VAT1-208ENST00000590924 PINX1Q96BK5 328 aaKnown RBP13.63□□□□□ -0.23
VAT1-208ENST00000590924 BSCL2Q96G97 398 aaPredicted RBP13.63□□□□□ -0.23
VAT1-208ENST00000590924 CITED4Q96RK1 184 aa13.63□□□□□ -0.23
VAT1-208ENST00000590924 C19orf73Q9NVV2 129 aa13.63□□□□□ -0.23
VAT1-208ENST00000590924 PSENENQ9NZ42 101 aa13.63□□□□□ -0.23
VAT1-208ENST00000590924 RCL1Q9Y2P8 373 aaKnown RBP13.63□□□□□ -0.23
VAT1-208ENST00000590924 K7EPK0 472 aa13.62□□□□□ -0.23
VAT1-208ENST00000590924 IFNA4P05014 189 aa13.62□□□□□ -0.23
VAT1-208ENST00000590924 PVALBP20472 110 aaPredicted RBP13.62□□□□□ -0.23
VAT1-208ENST00000590924 ARL3P36405 182 aa13.62□□□□□ -0.23
VAT1-208ENST00000590924 OPRK1P41145 380 aa13.62□□□□□ -0.23
VAT1-208ENST00000590924 SYNJ2BPP57105 145 aa13.62□□□□□ -0.23
VAT1-208ENST00000590924 IL34Q6ZMJ4 242 aa13.62□□□□□ -0.23
VAT1-208ENST00000590924 OR4X1Q8NH49 305 aa13.62□□□□□ -0.23
VAT1-208ENST00000590924 FNDC4Q9H6D8 234 aaPredicted RBP13.62□□□□□ -0.23
VAT1-208ENST00000590924 SIGLEC8Q9NYZ4 499 aa13.62□□□□□ -0.23
VAT1-208ENST00000590924 F8W735 103 aaPredicted RBP13.61□□□□□ -0.23
VAT1-208ENST00000590924 L7N2F9 121 aa13.61□□□□□ -0.23
VAT1-208ENST00000590924 BMPR1BO00238 502 aa13.61□□□□□ -0.23
VAT1-208ENST00000590924 TMEM50AO95807 157 aa13.61□□□□□ -0.23
VAT1-208ENST00000590924 TRBV12-3P01733 135 aa13.61□□□□□ -0.23
VAT1-208ENST00000590924 IGHV3-23P01764 117 aa13.61□□□□□ -0.23
VAT1-208ENST00000590924 RLN2P04090 185 aa13.61□□□□□ -0.23
VAT1-208ENST00000590924 RRAS2P62070 204 aaPredicted RBP13.61□□□□□ -0.23
VAT1-208ENST00000590924 VAMP2P63027 116 aa13.61□□□□□ -0.23
VAT1-208ENST00000590924 RAB32Q13637 225 aa13.61□□□□□ -0.23
VAT1-208ENST00000590924 SPANXN5Q5MJ07 72 aa13.61□□□□□ -0.23
VAT1-208ENST00000590924 GPHB5Q86YW7 130 aa13.61□□□□□ -0.23
VAT1-208ENST00000590924 ASB13Q8WXK3 278 aa13.61□□□□□ -0.23
VAT1-208ENST00000590924 C11orf1Q9H5F2 150 aa13.61□□□□□ -0.23
VAT1-208ENST00000590924 LSM5Q9Y4Y9 91 aaKnown RBP13.61□□□□□ -0.23
VAT1-208ENST00000590924 S4R3C0 116 aa13.61□□□□□ -0.23
VAT1-208ENST00000590924 IGHV3-21A0A0B4J1V1 117 aa13.6□□□□□ -0.23
VAT1-208ENST00000590924 TGOLN2O43493 480 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms