RNA–Protein interactions for RNA: ENST00000589831.1

TMEM259-207, Transcript of transmembrane protein 259, humanhuman

TSL 2

Gene TMEM259, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259-207ENST00000589831 GINS3Q9BRX5 216 aa14.43□□□□□ -0.1
TMEM259-207ENST00000589831 HIPK2Q9H2X6 1198 aa14.43□□□□□ -0.1
TMEM259-207ENST00000589831 SMPXQ9UHP9 88 aa14.43□□□□□ -0.1
TMEM259-207ENST00000589831 NBEAL2Q6ZNJ1 2754 aa14.43□□□□□ -0.1
TMEM259-207ENST00000589831 TRAV14DV4A0A0A6YYC5 116 aa14.42□□□□□ -0.1
TMEM259-207ENST00000589831 A0A0B4J2A0 478 aa14.42□□□□□ -0.1
TMEM259-207ENST00000589831 RPS10-NUDT3A0A1W2PQS6 291 aa14.42□□□□□ -0.1
TMEM259-207ENST00000589831 TSPAN4O14817 238 aa14.42□□□□□ -0.1
TMEM259-207ENST00000589831 ZNF79Q15937 498 aa14.42□□□□□ -0.1
TMEM259-207ENST00000589831 PVRIGQ6DKI7 326 aa14.42□□□□□ -0.1
TMEM259-207ENST00000589831 NOXA1Q86UR1 476 aa14.42□□□□□ -0.1
TMEM259-207ENST00000589831 TMEM116Q8NCL8 245 aa14.42□□□□□ -0.1
TMEM259-207ENST00000589831 WFDC10AQ9H1F0 79 aa14.42□□□□□ -0.1
TMEM259-207ENST00000589831 SHPKQ9UHJ6 478 aa14.42□□□□□ -0.1
TMEM259-207ENST00000589831 IGHV7-4-1A0A0J9YVY3 117 aa14.41□□□□□ -0.1
TMEM259-207ENST00000589831 TMEM50AO95807 157 aa14.41□□□□□ -0.1
TMEM259-207ENST00000589831 CCR6P51684 374 aa14.41□□□□□ -0.1
TMEM259-207ENST00000589831 TMEM128Q5BJH2 165 aa14.41□□□□□ -0.1
TMEM259-207ENST00000589831 ZNF600Q6ZNG1 722 aa14.41□□□□□ -0.1
TMEM259-207ENST00000589831 OR10C1Q96KK4 312 aa14.41□□□□□ -0.1
TMEM259-207ENST00000589831 CITED4Q96RK1 184 aa14.41□□□□□ -0.1
TMEM259-207ENST00000589831 RHPN1-AS1Q9BWJ2 59 aa14.41□□□□□ -0.1
TMEM259-207ENST00000589831 PRR13Q9NZ81 148 aa14.41□□□□□ -0.1
TMEM259-207ENST00000589831 OR4C46A6NHA9 309 aa14.4□□□□□ -0.1
TMEM259-207ENST00000589831 SUPT4H1P63272 117 aaKnown RBP14.4□□□□□ -0.1
TMEM259-207ENST00000589831 SMCO1Q147U7 214 aa14.4□□□□□ -0.1
TMEM259-207ENST00000589831 BSXQ3C1V8 233 aa14.4□□□□□ -0.1
TMEM259-207ENST00000589831 LINC00322Q6ZN03 302 aaPredicted RBP14.4□□□□□ -0.1
TMEM259-207ENST00000589831 MUC7Q8TAX7 377 aa14.4□□□□□ -0.1
TMEM259-207ENST00000589831 NDUFA13Q9P0J0 144 aa14.4□□□□□ -0.1
TMEM259-207ENST00000589831 RBMY1BA6NDE4 496 aaKnown RBP14.39□□□□□ -0.11
TMEM259-207ENST00000589831 RBMY1EA6NEQ0 496 aaKnown RBP14.39□□□□□ -0.11
TMEM259-207ENST00000589831 CLN5O75503 358 aa14.39□□□□□ -0.11
TMEM259-207ENST00000589831 RBMY1DP0C7P1 496 aaKnown RBP14.39□□□□□ -0.11
TMEM259-207ENST00000589831 VAMP1P23763 118 aa14.39□□□□□ -0.11
TMEM259-207ENST00000589831 C2orf83Q53S99 150 aa14.39□□□□□ -0.11
TMEM259-207ENST00000589831 TRIQKQ629K1 86 aa14.39□□□□□ -0.11
TMEM259-207ENST00000589831 TOMM20LQ6UXN7 152 aa14.39□□□□□ -0.11
TMEM259-207ENST00000589831 LYZL2Q7Z4W2 148 aa14.39□□□□□ -0.11
TMEM259-207ENST00000589831 SLC24A4Q8NFF2 622 aa14.39□□□□□ -0.11
TMEM259-207ENST00000589831 OR4X1Q8NH49 305 aa14.39□□□□□ -0.11
TMEM259-207ENST00000589831 RNASEH2CQ8TDP1 164 aaKnown RBP14.39□□□□□ -0.11
TMEM259-207ENST00000589831 PUS1Q9Y606 427 aaKnown RBP eCLIP14.39□□□□□ -0.11
TMEM259-207ENST00000589831 TRAV30A0A087WSZ9 112 aa14.38□□□□□ -0.11
TMEM259-207ENST00000589831 IGHV3-49A0A0A0MS15 119 aa14.38□□□□□ -0.11
TMEM259-207ENST00000589831 CHEK1O14757 476 aa14.38□□□□□ -0.11
TMEM259-207ENST00000589831 NXPH3O95157 252 aa14.38□□□□□ -0.11
TMEM259-207ENST00000589831 CD5P06127 495 aa14.38□□□□□ -0.11
TMEM259-207ENST00000589831 ETFRF1Q6IPR1 90 aa14.38□□□□□ -0.11
TMEM259-207ENST00000589831 OR1S1Q8NH92 325 aa14.38□□□□□ -0.11
TMEM259-207ENST00000589831 GGTLC1Q9BX51 225 aa14.38□□□□□ -0.11
TMEM259-207ENST00000589831 SRRQ9GZT4 340 aa14.38□□□□□ -0.11
TMEM259-207ENST00000589831 FNDC4Q9H6D8 234 aaPredicted RBP14.38□□□□□ -0.11
TMEM259-207ENST00000589831 LOC102724200A0A096LPH7 203 aaPredicted RBP14.37□□□□□ -0.11
TMEM259-207ENST00000589831 A0A1B0GU03 582 aa14.37□□□□□ -0.11
TMEM259-207ENST00000589831 DUXBA0A1W2PPF3 345 aa14.37□□□□□ -0.11
TMEM259-207ENST00000589831 IFNA10P01566 189 aa14.37□□□□□ -0.11
TMEM259-207ENST00000589831 SLC25A4P12235 298 aa14.37□□□□□ -0.11
TMEM259-207ENST00000589831 LYL1P12980 280 aa14.37□□□□□ -0.11
TMEM259-207ENST00000589831 NPY1RP25929 384 aa14.37□□□□□ -0.11
TMEM259-207ENST00000589831 CMC4P56277 68 aaPredicted RBP14.37□□□□□ -0.11
TMEM259-207ENST00000589831 PAFAH1B2P68402 229 aa14.37□□□□□ -0.11
TMEM259-207ENST00000589831 TNFRSF9Q07011 255 aa14.37□□□□□ -0.11
TMEM259-207ENST00000589831 MLANAQ16655 118 aa14.37□□□□□ -0.11
TMEM259-207ENST00000589831 NMSQ5H8A3 153 aa14.37□□□□□ -0.11
TMEM259-207ENST00000589831 RNF2Q99496 336 aa14.37□□□□□ -0.11
TMEM259-207ENST00000589831 TMEM231Q9H6L2 316 aa14.37□□□□□ -0.11
TMEM259-207ENST00000589831 NAP1L6A6NFF2 107 aa14.36□□□□□ -0.11
TMEM259-207ENST00000589831 RBMS2Q15434 407 aaKnown RBP14.36□□□□□ -0.11
TMEM259-207ENST00000589831 CENPSQ8N2Z9 138 aa14.36□□□□□ -0.11
TMEM259-207ENST00000589831 DTD1Q8TEA8 209 aa14.36□□□□□ -0.11
TMEM259-207ENST00000589831 NARS2Q96I59 477 aaKnown RBP14.36□□□□□ -0.11
TMEM259-207ENST00000589831 HSPB7Q9UBY9 170 aa14.36□□□□□ -0.11
TMEM259-207ENST00000589831 UBQLN2Q9UHD9 624 aa14.36□□□□□ -0.11
TMEM259-207ENST00000589831 U3KQ87 197 aa14.36□□□□□ -0.11
TMEM259-207ENST00000589831 HUWE1Q7Z6Z7 4374 aaKnown RBP14.35□□□□□ -0.11
TMEM259-207ENST00000589831 IGHV3OR16-13A0A075B7E8 117 aa14.35□□□□□ -0.11
TMEM259-207ENST00000589831 IGHV3-74A0A0B4J1X5 117 aa14.35□□□□□ -0.11
TMEM259-207ENST00000589831 A0A1W2PS18 150 aa14.35□□□□□ -0.11
TMEM259-207ENST00000589831 CENPXA8MT69 81 aa14.35□□□□□ -0.11
TMEM259-207ENST00000589831 NPPCP23582 126 aa14.35□□□□□ -0.11
TMEM259-207ENST00000589831 ZNF414Q96IQ9 312 aa14.35□□□□□ -0.11
TMEM259-207ENST00000589831 IGKV3-7A0A075B6H7 116 aa14.34□□□□□ -0.11
TMEM259-207ENST00000589831 SFT2D2O95562 160 aa14.34□□□□□ -0.11
TMEM259-207ENST00000589831 RND2P52198 227 aa14.34□□□□□ -0.11
TMEM259-207ENST00000589831 ATP5IP56385 69 aaPredicted RBP14.34□□□□□ -0.11
TMEM259-207ENST00000589831 TCF24Q7RTU0 167 aa14.34□□□□□ -0.11
TMEM259-207ENST00000589831 METTL26Q96S19 204 aa14.34□□□□□ -0.11
TMEM259-207ENST00000589831 FAM110AQ9BQ89 295 aa14.34□□□□□ -0.11
TMEM259-207ENST00000589831 RBKSQ9H477 322 aa14.34□□□□□ -0.11
TMEM259-207ENST00000589831 RETNQ9HD89 108 aa14.34□□□□□ -0.11
TMEM259-207ENST00000589831 MRPL36Q9P0J6 103 aaKnown RBP14.34□□□□□ -0.11
TMEM259-207ENST00000589831 IFNA4P05014 189 aa14.33□□□□□ -0.12
TMEM259-207ENST00000589831 TFPI2P48307 235 aa14.33□□□□□ -0.12
TMEM259-207ENST00000589831 APOC4P55056 127 aa14.33□□□□□ -0.12
TMEM259-207ENST00000589831 UBE2MP61081 183 aaKnown RBP14.33□□□□□ -0.12
TMEM259-207ENST00000589831 RPL11P62913 178 aaKnown RBP14.33□□□□□ -0.12
TMEM259-207ENST00000589831 TIGITQ495A1 244 aa14.33□□□□□ -0.12
TMEM259-207ENST00000589831 LRTM2Q8N967 370 aa14.33□□□□□ -0.12
TMEM259-207ENST00000589831 OR1S2Q8NGQ3 325 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms