RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 FGL1Q08830 312 aa4.52□□□□□ -1.69
VPS25-204ENST00000589577 FXYD3Q14802 87 aa4.52□□□□□ -1.69
VPS25-204ENST00000589577 PRSS8Q16651 343 aa4.52□□□□□ -1.69
VPS25-204ENST00000589577 ANKRD55Q3KP44 614 aa4.52□□□□□ -1.69
VPS25-204ENST00000589577 CD300EQ496F6 205 aaPredicted RBP4.52□□□□□ -1.69
VPS25-204ENST00000589577 ZNF585BQ52M93 769 aa4.52□□□□□ -1.69
VPS25-204ENST00000589577 LYZL2Q7Z4W2 148 aa4.52□□□□□ -1.69
VPS25-204ENST00000589577 VKORC1L1Q8N0U8 176 aa4.52□□□□□ -1.69
VPS25-204ENST00000589577 PUSL1Q8N0Z8 303 aaKnown RBP4.52□□□□□ -1.69
VPS25-204ENST00000589577 GRPEL2Q8TAA5 225 aa4.52□□□□□ -1.69
VPS25-204ENST00000589577 C2orf50Q96LR7 162 aa4.52□□□□□ -1.69
VPS25-204ENST00000589577 FYTTD1Q96QD9 318 aaKnown RBP4.52□□□□□ -1.69
VPS25-204ENST00000589577 SRSF8Q9BRL6 282 aaKnown RBP4.52□□□□□ -1.69
VPS25-204ENST00000589577 GGTLC1Q9BX51 225 aa4.52□□□□□ -1.69
VPS25-204ENST00000589577 QTRT1Q9BXR0 403 aaKnown RBP4.52□□□□□ -1.69
VPS25-204ENST00000589577 ZNF430Q9H8G1 570 aaPredicted RBP4.52□□□□□ -1.69
VPS25-204ENST00000589577 HEYLQ9NQ87 328 aaPredicted RBP4.52□□□□□ -1.69
VPS25-204ENST00000589577 ZNF257Q9Y2Q1 563 aa4.52□□□□□ -1.69
VPS25-204ENST00000589577 OR51B2Q9Y5P1 312 aa4.52□□□□□ -1.69
VPS25-204ENST00000589577 hCG_2014768A0A024R1R8 64 aa4.51□□□□□ -1.69
VPS25-204ENST00000589577 C16orf90A8MZG2 172 aa4.51□□□□□ -1.69
VPS25-204ENST00000589577 M0R2N4 97 aa4.51□□□□□ -1.69
VPS25-204ENST00000589577 CCSO14618 274 aa4.51□□□□□ -1.69
VPS25-204ENST00000589577 ST8SIA3O43173 380 aa4.51□□□□□ -1.69
VPS25-204ENST00000589577 ADAP1O75689 374 aa4.51□□□□□ -1.69
VPS25-204ENST00000589577 TRAPPC2P0DI81 140 aa4.51□□□□□ -1.69
VPS25-204ENST00000589577 TRAPPC2BP0DI82 140 aa4.51□□□□□ -1.69
VPS25-204ENST00000589577 RBMY1A1P0DJD3 496 aaKnown RBP4.51□□□□□ -1.69
VPS25-204ENST00000589577 EGR2P11161 476 aaPredicted RBP4.51□□□□□ -1.69
VPS25-204ENST00000589577 CTRB1P17538 263 aa4.51□□□□□ -1.69
VPS25-204ENST00000589577 BMI1P35226 326 aa4.51□□□□□ -1.69
VPS25-204ENST00000589577 SYNJ2BPP57105 145 aa4.51□□□□□ -1.69
VPS25-204ENST00000589577 TCTAP57738 103 aa4.51□□□□□ -1.69
VPS25-204ENST00000589577 RAP2BP61225 183 aa4.51□□□□□ -1.69
VPS25-204ENST00000589577 HSPE1P61604 102 aaKnown RBP4.51□□□□□ -1.69
VPS25-204ENST00000589577 RAB11AP62491 216 aa4.51□□□□□ -1.69
VPS25-204ENST00000589577 CX3CL1P78423 397 aa4.51□□□□□ -1.69
VPS25-204ENST00000589577 ECSCRQ19T08 205 aa4.51□□□□□ -1.69
VPS25-204ENST00000589577 DEFB135Q30KP9 77 aa4.51□□□□□ -1.69
VPS25-204ENST00000589577 NMSQ5H8A3 153 aa4.51□□□□□ -1.69
VPS25-204ENST00000589577 CTRB2Q6GPI1 263 aa4.51□□□□□ -1.69
VPS25-204ENST00000589577 ZNF562Q6V9R5 426 aa4.51□□□□□ -1.69
VPS25-204ENST00000589577 OR1L6Q8NGR2 347 aa4.51□□□□□ -1.69
VPS25-204ENST00000589577 OR52E5Q8NH55 327 aa4.51□□□□□ -1.69
VPS25-204ENST00000589577 THAP6Q8TBB0 222 aa4.51□□□□□ -1.69
VPS25-204ENST00000589577 SRSF12Q8WXF0 261 aaKnown RBP4.51□□□□□ -1.69
VPS25-204ENST00000589577 RITA1Q96K30 269 aa4.51□□□□□ -1.69
VPS25-204ENST00000589577 ZC4H2Q9NQZ6 224 aa4.51□□□□□ -1.69
VPS25-204ENST00000589577 ZNF355PQ9NSJ1 428 aa4.51□□□□□ -1.69
VPS25-204ENST00000589577 TMEM14BQ9NUH8 114 aa4.51□□□□□ -1.69
VPS25-204ENST00000589577 PRR13Q9NZ81 148 aa4.51□□□□□ -1.69
VPS25-204ENST00000589577 THYN1Q9P016 225 aa4.51□□□□□ -1.69
VPS25-204ENST00000589577 PAIP2BQ9ULR5 123 aaKnown RBP4.51□□□□□ -1.69
VPS25-204ENST00000589577 FOXA2Q9Y261 457 aaPredicted RBP4.51□□□□□ -1.69
VPS25-204ENST00000589577 TP53TG1Q9Y2A0 90 aa4.51□□□□□ -1.69
VPS25-204ENST00000589577 NSG2Q9Y328 171 aa4.51□□□□□ -1.69
VPS25-204ENST00000589577 HMX3A6NHT5 357 aa4.5□□□□□ -1.69
VPS25-204ENST00000589577 DBX1A6NMT0 343 aa4.5□□□□□ -1.69
VPS25-204ENST00000589577 SRRM4A7MD48 611 aaKnown RBP4.5□□□□□ -1.69
VPS25-204ENST00000589577 CORTO00230 105 aa4.5□□□□□ -1.69
VPS25-204ENST00000589577 SPRY2O43597 315 aa4.5□□□□□ -1.69
VPS25-204ENST00000589577 SYNGR2O43760 224 aa4.5□□□□□ -1.69
VPS25-204ENST00000589577 IFNA10P01566 189 aa4.5□□□□□ -1.69
VPS25-204ENST00000589577 IGKV1-39P01597 117 aa4.5□□□□□ -1.69
VPS25-204ENST00000589577 IGKV1-5P01602 117 aa4.5□□□□□ -1.69
VPS25-204ENST00000589577 IGLV2-23P01705 113 aa4.5□□□□□ -1.69
VPS25-204ENST00000589577 IGKV1D-39P04432 117 aa4.5□□□□□ -1.69
VPS25-204ENST00000589577 GIPP09681 153 aaPredicted RBP4.5□□□□□ -1.69
VPS25-204ENST00000589577 OR9G9P0C7N8 305 aa4.5□□□□□ -1.69
VPS25-204ENST00000589577 INAFM2P0DMQ5 153 aa4.5□□□□□ -1.69
VPS25-204ENST00000589577 OR13C7P0DN81 318 aa4.5□□□□□ -1.69
VPS25-204ENST00000589577 HIST1H1BP16401 226 aaKnown RBP4.5□□□□□ -1.69
VPS25-204ENST00000589577 EDN2P20800 178 aa4.5□□□□□ -1.69
VPS25-204ENST00000589577 ZP3P21754 424 aa4.5□□□□□ -1.69
VPS25-204ENST00000589577 ATP5IP56385 69 aaPredicted RBP4.5□□□□□ -1.69
VPS25-204ENST00000589577 PRCDQ00LT1 54 aa4.5□□□□□ -1.69
VPS25-204ENST00000589577 UNQ5815/PRO19632Q6UWF5 114 aa4.5□□□□□ -1.69
VPS25-204ENST00000589577 Q6ZNX1 250 aa4.5□□□□□ -1.69
VPS25-204ENST00000589577 Q6ZWC4 215 aa4.5□□□□□ -1.69
VPS25-204ENST00000589577 AKAP14Q86UN6 197 aa4.5□□□□□ -1.69
VPS25-204ENST00000589577 STX12Q86Y82 276 aa4.5□□□□□ -1.69
VPS25-204ENST00000589577 ZBTB8BQ8NAP8 495 aaPredicted RBP4.5□□□□□ -1.69
VPS25-204ENST00000589577 OR2K2Q8NGT1 345 aa4.5□□□□□ -1.69
VPS25-204ENST00000589577 LHFPL5Q8TAF8 219 aa4.5□□□□□ -1.69
VPS25-204ENST00000589577 DTD1Q8TEA8 209 aa4.5□□□□□ -1.69
VPS25-204ENST00000589577 C2CD4CQ8TF44 421 aa4.5□□□□□ -1.69
VPS25-204ENST00000589577 GPR146Q96CH1 333 aa4.5□□□□□ -1.69
VPS25-204ENST00000589577 MS4A10Q96PG2 267 aa4.5□□□□□ -1.69
VPS25-204ENST00000589577 RAB40CQ96S21 281 aa4.5□□□□□ -1.69
VPS25-204ENST00000589577 NMES1Q9C002 83 aa4.5□□□□□ -1.69
VPS25-204ENST00000589577 ZNF436Q9C0F3 470 aaPredicted RBP4.5□□□□□ -1.69
VPS25-204ENST00000589577 LSM5Q9Y4Y9 91 aaKnown RBP4.5□□□□□ -1.69
VPS25-204ENST00000589577 RNF213Q63HN8 5207 aa4.5□□□□□ -1.69
VPS25-204ENST00000589577 VPS13BQ7Z7G8 4022 aa4.49□□□□□ -1.69
VPS25-204ENST00000589577 AGRNO00468 2067 aa4.49□□□□□ -1.69
VPS25-204ENST00000589577 LOC102724200A0A096LPH7 203 aaPredicted RBP4.49□□□□□ -1.69
VPS25-204ENST00000589577 RPS10-NUDT3A0A1W2PQS6 291 aa4.49□□□□□ -1.69
VPS25-204ENST00000589577 ANKRD34BA5PLL1 514 aa4.49□□□□□ -1.69
VPS25-204ENST00000589577 E5RGE8 158 aa4.49□□□□□ -1.69
VPS25-204ENST00000589577 SSSCA1O60232 199 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms