RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 HSD17B13Q7Z5P4 300 aaPredicted RBP2.58□□□□□ -2
ZNF540-207ENST00000589285 ZNF695Q8IW36 515 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 SGPP2Q8IWX5 399 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 CMTM1Q8IZ96 169 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 ZFP82Q8N141 532 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 ARRDC1Q8N5I2 433 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 KLHDC1Q8N7A1 406 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 Q8N7P7 452 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 UBAC2Q8NBM4 344 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 OR2T35Q8NGX2 323 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 THAP6Q8TBB0 222 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 ZNF431Q8TF32 576 aaPredicted RBP2.58□□□□□ -2
ZNF540-207ENST00000589285 TMEM230Q96A57 120 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 SDSLQ96GA7 329 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 LITAFQ99732 161 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 PRRT1Q99946 306 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 FBXL15Q9H469 300 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 ZNF430Q9H8G1 570 aaPredicted RBP2.58□□□□□ -2
ZNF540-207ENST00000589285 SIGLEC9Q9Y336 463 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 CR1P17927 2039 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 FAM74A7A6NL05 159 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 C15orf65H3BRN8 121 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 DLEU1O43261 78 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 IFNA10P01566 189 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 IFNA17P01571 189 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 IGHV3-23P01764 117 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 GZMHP20718 246 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 LPAR6P43657 344 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 CAV2P51636 162 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 KRTAP10-7P60409 375 aaPredicted RBP2.58□□□□□ -2
ZNF540-207ENST00000589285 SUPT4H1P63272 117 aaKnown RBP2.58□□□□□ -2
ZNF540-207ENST00000589285 IAH1Q2TAA2 248 aaPredicted RBP2.58□□□□□ -2
ZNF540-207ENST00000589285 FAM74A3Q4VXF1 159 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 HCP5Q6MZN7 132 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 ATRAIDQ6UW56 229 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 Q6ZSR3 168 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 SAXO1Q8IYX7 474 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 C11orf42Q8N5U0 333 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 SLC35G3Q8N808 338 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 TMEM229BQ8NBD8 167 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 CCDC54Q8NEL0 328 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 TMEM186Q96B77 213 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 RAB39BQ96DA2 213 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 OR10C1Q96KK4 312 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 MS4A10Q96PG2 267 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 RTBDNQ9BSG5 229 aaPredicted RBP2.58□□□□□ -2
ZNF540-207ENST00000589285 MARVELD1Q9BSK0 173 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 OR51J1Q9H342 316 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.58□□□□□ -2
ZNF540-207ENST00000589285 IDI2-AS1Q9NZ38 188 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 IL36GQ9NZH8 169 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 WSB1Q9Y6I7 421 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 C3orf85A0A1B0GTC6 90 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 H3BUX3 64 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 FCN1O00602 326 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 CREBL2O60519 120 aaPredicted RBP2.57□□□□□ -2
ZNF540-207ENST00000589285 PGLYRP1O75594 196 aaPredicted RBP2.57□□□□□ -2
ZNF540-207ENST00000589285 CST7O76096 145 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 NDUFB6O95139 128 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 CNIH1O95406 144 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 CFDP00746 253 aaPredicted RBP2.57□□□□□ -2
ZNF540-207ENST00000589285 IGHV4-59P01825 116 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 CD55P08174 381 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 DEFA4P12838 97 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 PSMB6P28072 239 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 KCNJ3P48549 501 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 FGF8P55075 233 aaPredicted RBP2.57□□□□□ -2
ZNF540-207ENST00000589285 H2BFSP57053 126 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 RAB2AP61019 212 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 ECSCRQ19T08 205 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 LGALSLQ3ZCW2 172 aaPredicted RBP2.57□□□□□ -2
ZNF540-207ENST00000589285 TEX36Q5VZQ5 186 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 SLC35E4Q6ICL7 350 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 OR8G2PQ6IF36 304 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 NFE4Q86UQ8 179 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 C1orf174Q8IYL3 243 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 STPG2Q8N412 459 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 OR11H7Q8NGC8 314 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 OR10W1Q8NGF6 305 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 GLYATL2Q8WU03 294 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 CACNG8Q8WXS5 425 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 PTX4Q96A99 478 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 NOL4LQ96MY1 436 aaPredicted RBP2.57□□□□□ -2
ZNF540-207ENST00000589285 TMEM133Q9H2Q1 129 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 IFI27L2Q9H2X8 130 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 OPN4Q9UHM6 478 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 NAGKQ9UJ70 344 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 RFNGQ9Y644 331 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 LINC00312Q9Y6C7 94 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 TRRAPQ9Y4A5 3859 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 TRBV6-7A0A0A0MS04 114 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 CENPVL3A0A0U1RRI6 287 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 SRRM4A7MD48 611 aaKnown RBP2.57□□□□□ -2
ZNF540-207ENST00000589285 B4DSR2 109 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 TSTD3H0UI37 97 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 SCGNO76038 276 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 CD37P11049 281 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 HTR1DP28221 377 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 DDTP30046 118 aa2.57□□□□□ -2
ZNF540-207ENST00000589285 BLCAPP62952 87 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms