RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 A0A0B4J293 547 aa10.13□□□□□ -0.79
VMP1-209ENST00000588915 IGHV3-66A0A0C4DH42 116 aa10.13□□□□□ -0.79
VMP1-209ENST00000588915 APOA1P02647 267 aa10.13□□□□□ -0.79
VMP1-209ENST00000588915 P0C879 139 aa10.13□□□□□ -0.79
VMP1-209ENST00000588915 RCVRNP35243 200 aa10.13□□□□□ -0.79
VMP1-209ENST00000588915 EIF2B2P49770 351 aaKnown RBP10.13□□□□□ -0.79
VMP1-209ENST00000588915 AP2S1P53680 142 aaPredicted RBP10.13□□□□□ -0.79
VMP1-209ENST00000588915 SLC35G3Q8N808 338 aa10.13□□□□□ -0.79
VMP1-209ENST00000588915 CSNK1G2-AS1Q8NCQ2 148 aa10.13□□□□□ -0.79
VMP1-209ENST00000588915 OR4X1Q8NH49 305 aa10.13□□□□□ -0.79
VMP1-209ENST00000588915 DCANP1Q8TF63 244 aa10.13□□□□□ -0.79
VMP1-209ENST00000588915 PDCD10Q9BUL8 212 aa10.13□□□□□ -0.79
VMP1-209ENST00000588915 X6R8D5 127 aa10.13□□□□□ -0.79
VMP1-209ENST00000588915 KIAA1109Q2LD37 5005 aa10.13□□□□□ -0.79
VMP1-209ENST00000588915 FAT2Q9NYQ8 4349 aa10.12□□□□□ -0.79
VMP1-209ENST00000588915 IGHV4-4A0A075B6R2 117 aa10.12□□□□□ -0.79
VMP1-209ENST00000588915 IFNA17P01571 189 aa10.12□□□□□ -0.79
VMP1-209ENST00000588915 RNASE2P10153 161 aaKnown RBP10.12□□□□□ -0.79
VMP1-209ENST00000588915 P2RY1P47900 373 aa10.12□□□□□ -0.79
VMP1-209ENST00000588915 Q6ZTC4 211 aa10.12□□□□□ -0.79
VMP1-209ENST00000588915 STXBP6Q8NFX7 210 aa10.12□□□□□ -0.79
VMP1-209ENST00000588915 TMEM230Q96A57 120 aa10.12□□□□□ -0.79
VMP1-209ENST00000588915 SEPSECSQ9HD40 501 aaKnown RBP10.12□□□□□ -0.79
VMP1-209ENST00000588915 TBC1D24Q9ULP9 559 aa10.12□□□□□ -0.79
VMP1-209ENST00000588915 AGRNO00468 2067 aa10.11□□□□□ -0.79
VMP1-209ENST00000588915 ELOA3CA0A087WX78 387 aaPredicted RBP10.11□□□□□ -0.79
VMP1-209ENST00000588915 HELTA6NFD8 242 aa10.11□□□□□ -0.79
VMP1-209ENST00000588915 ATP6V1G2O95670 118 aa10.11□□□□□ -0.79
VMP1-209ENST00000588915 IGKV1-5P01602 117 aa10.11□□□□□ -0.79
VMP1-209ENST00000588915 AMBPP02760 352 aa10.11□□□□□ -0.79
VMP1-209ENST00000588915 AKR1C2P52895 323 aa10.11□□□□□ -0.79
VMP1-209ENST00000588915 BSXQ3C1V8 233 aa10.11□□□□□ -0.79
VMP1-209ENST00000588915 C1QTNF4Q9BXJ3 329 aa10.11□□□□□ -0.79
VMP1-209ENST00000588915 FNDC4Q9H6D8 234 aaPredicted RBP10.11□□□□□ -0.79
VMP1-209ENST00000588915 U3KQE9 123 aa10.11□□□□□ -0.79
VMP1-209ENST00000588915 DNAH2Q9P225 4427 aa10.11□□□□□ -0.79
VMP1-209ENST00000588915 B3GALNT1O75752 331 aa10.1□□□□□ -0.79
VMP1-209ENST00000588915 ZNF688P0C7X2 276 aa10.1□□□□□ -0.79
VMP1-209ENST00000588915 P0DMU3 169 aa10.1□□□□□ -0.79
VMP1-209ENST00000588915 FAM231AP0DMU4 169 aa10.1□□□□□ -0.79
VMP1-209ENST00000588915 FAM231CP0DMU5 169 aa10.1□□□□□ -0.79
VMP1-209ENST00000588915 C4BPBP20851 252 aa10.1□□□□□ -0.79
VMP1-209ENST00000588915 TGFBR1P36897 503 aa10.1□□□□□ -0.79
VMP1-209ENST00000588915 OPRK1P41145 380 aa10.1□□□□□ -0.79
VMP1-209ENST00000588915 NUTF2P61970 127 aaKnown RBP10.1□□□□□ -0.79
VMP1-209ENST00000588915 SPINK9Q5DT21 86 aa10.1□□□□□ -0.79
VMP1-209ENST00000588915 LHFPL1Q86WI0 220 aa10.1□□□□□ -0.79
VMP1-209ENST00000588915 ARRDC1Q8N5I2 433 aa10.1□□□□□ -0.79
VMP1-209ENST00000588915 ENY2Q9NPA8 101 aa10.1□□□□□ -0.79
VMP1-209ENST00000588915 A0A1B0GVY2 172 aa10.09□□□□□ -0.79
VMP1-209ENST00000588915 RPS10-NUDT3A0A1W2PQS6 291 aa10.09□□□□□ -0.79
VMP1-209ENST00000588915 KNCNA6PVL3 124 aa10.09□□□□□ -0.79
VMP1-209ENST00000588915 IGKV1-17P01599 117 aa10.09□□□□□ -0.79
VMP1-209ENST00000588915 MED14OSP0DP75 135 aa10.09□□□□□ -0.79
VMP1-209ENST00000588915 PGAM2P15259 253 aa10.09□□□□□ -0.79
VMP1-209ENST00000588915 NPY1RP25929 384 aa10.09□□□□□ -0.79
VMP1-209ENST00000588915 ETV6P41212 452 aa10.09□□□□□ -0.79
VMP1-209ENST00000588915 HOXA1P49639 335 aaPredicted RBP10.09□□□□□ -0.79
VMP1-209ENST00000588915 PPP5CP53041 499 aa10.09□□□□□ -0.79
VMP1-209ENST00000588915 PIGPP57054 158 aa10.09□□□□□ -0.79
VMP1-209ENST00000588915 IZUMO4Q1ZYL8 232 aa10.09□□□□□ -0.79
VMP1-209ENST00000588915 AARDQ4LEZ3 155 aa10.09□□□□□ -0.79
VMP1-209ENST00000588915 ACTL10Q5JWF8 245 aa10.09□□□□□ -0.79
VMP1-209ENST00000588915 POM121L12Q8N7R1 296 aa10.09□□□□□ -0.79
VMP1-209ENST00000588915 OR52E5Q8NH55 327 aa10.09□□□□□ -0.79
VMP1-209ENST00000588915 Q8WTZ3 238 aa10.09□□□□□ -0.79
VMP1-209ENST00000588915 YIPF6Q96EC8 236 aa10.09□□□□□ -0.79
VMP1-209ENST00000588915 RRNAD1Q96FB5 475 aaKnown RBP10.09□□□□□ -0.79
VMP1-209ENST00000588915 RAB40CQ96S21 281 aa10.09□□□□□ -0.79
VMP1-209ENST00000588915 MRPL36Q9P0J6 103 aaKnown RBP10.09□□□□□ -0.79
VMP1-209ENST00000588915 COMMD3Q9UBI1 195 aa10.09□□□□□ -0.79
VMP1-209ENST00000588915 DEFB131BA0A096LNP1 70 aa10.08□□□□□ -0.8
VMP1-209ENST00000588915 C3orf85A0A1B0GTC6 90 aa10.08□□□□□ -0.8
VMP1-209ENST00000588915 TBPP20226 339 aa10.08□□□□□ -0.8
VMP1-209ENST00000588915 HTR2BP41595 481 aa10.08□□□□□ -0.8
VMP1-209ENST00000588915 YPEL3P61236 119 aaPredicted RBP10.08□□□□□ -0.8
VMP1-209ENST00000588915 MLANAQ16655 118 aa10.08□□□□□ -0.8
VMP1-209ENST00000588915 C12orf74Q32Q52 190 aa10.08□□□□□ -0.8
VMP1-209ENST00000588915 C16orf54Q6UWD8 224 aa10.08□□□□□ -0.8
VMP1-209ENST00000588915 SNX29P2Q8IUI4 249 aa10.08□□□□□ -0.8
VMP1-209ENST00000588915 FAM219AQ8IW50 185 aa10.08□□□□□ -0.8
VMP1-209ENST00000588915 OR1S2Q8NGQ3 325 aa10.08□□□□□ -0.8
VMP1-209ENST00000588915 ZFAND1Q8TCF1 268 aa10.08□□□□□ -0.8
VMP1-209ENST00000588915 TP53RKQ96S44 253 aa10.08□□□□□ -0.8
VMP1-209ENST00000588915 VCX3AQ9NNX9 186 aa10.08□□□□□ -0.8
VMP1-209ENST00000588915 HNRNPCP07910 306 aaKnown RBP eCLIP10.07□□□□□ -0.8
VMP1-209ENST00000588915 SLC25A4P12235 298 aa10.07□□□□□ -0.8
VMP1-209ENST00000588915 UCP1P25874 307 aa10.07□□□□□ -0.8
VMP1-209ENST00000588915 SPCS3P61009 180 aa10.07□□□□□ -0.8
VMP1-209ENST00000588915 SNRPD3P62318 126 aaKnown RBP10.07□□□□□ -0.8
VMP1-209ENST00000588915 DHRS2Q13268 280 aa10.07□□□□□ -0.8
VMP1-209ENST00000588915 TIGITQ495A1 244 aa10.07□□□□□ -0.8
VMP1-209ENST00000588915 RNASE10Q5GAN6 216 aaKnown RBP10.07□□□□□ -0.8
VMP1-209ENST00000588915 CCDC71LQ8N9Z2 235 aa10.07□□□□□ -0.8
VMP1-209ENST00000588915 RNASEH2CQ8TDP1 164 aaKnown RBP10.07□□□□□ -0.8
VMP1-209ENST00000588915 GLMPQ8WWB7 406 aa10.07□□□□□ -0.8
VMP1-209ENST00000588915 NEU1Q99519 415 aa10.07□□□□□ -0.8
VMP1-209ENST00000588915 NDUFAF3Q9BU61 184 aa10.07□□□□□ -0.8
VMP1-209ENST00000588915 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.07□□□□□ -0.8
VMP1-209ENST00000588915 COPZ2Q9P299 210 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms