RNA–Protein interactions for RNA: ENST00000588738.5

ERCC1-207, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-207ENST00000588738 RBKSQ9H477 322 aa14.25□□□□□ -0.13
ERCC1-207ENST00000588738 SMAD5-AS1Q9Y6J3 95 aa14.25□□□□□ -0.13
ERCC1-207ENST00000588738 PITX3O75364 302 aa14.24□□□□□ -0.13
ERCC1-207ENST00000588738 EDN2P20800 178 aa14.24□□□□□ -0.13
ERCC1-207ENST00000588738 DEFB114Q30KQ6 69 aa14.24□□□□□ -0.13
ERCC1-207ENST00000588738 CD300EQ496F6 205 aaPredicted RBP14.24□□□□□ -0.13
ERCC1-207ENST00000588738 UXS1Q8NBZ7 420 aa14.24□□□□□ -0.13
ERCC1-207ENST00000588738 CACNG8Q8WXS5 425 aa14.24□□□□□ -0.13
ERCC1-207ENST00000588738 TMEM190Q8WZ59 177 aa14.24□□□□□ -0.13
ERCC1-207ENST00000588738 C20orf85Q9H1P6 137 aa14.24□□□□□ -0.13
ERCC1-207ENST00000588738 MRPL27Q9P0M9 148 aaKnown RBP14.24□□□□□ -0.13
ERCC1-207ENST00000588738 U3KQ87 197 aa14.24□□□□□ -0.13
ERCC1-207ENST00000588738 RPS10-NUDT3A0A1W2PQS6 291 aa14.23□□□□□ -0.13
ERCC1-207ENST00000588738 IZUMO1RA6ND01 250 aa14.23□□□□□ -0.13
ERCC1-207ENST00000588738 IFNA10P01566 189 aa14.23□□□□□ -0.13
ERCC1-207ENST00000588738 TCRBP04435 133 aa14.23□□□□□ -0.13
ERCC1-207ENST00000588738 GGNBP1Q5YKI7 109 aa14.23□□□□□ -0.13
ERCC1-207ENST00000588738 MZT2BQ6NZ67 158 aa14.23□□□□□ -0.13
ERCC1-207ENST00000588738 RNASEH2CQ8TDP1 164 aaKnown RBP14.23□□□□□ -0.13
ERCC1-207ENST00000588738 B9D2Q9BPU9 175 aa14.23□□□□□ -0.13
ERCC1-207ENST00000588738 FNDC4Q9H6D8 234 aaPredicted RBP14.23□□□□□ -0.13
ERCC1-207ENST00000588738 DAZ1Q9NQZ3 744 aaKnown RBP14.23□□□□□ -0.13
ERCC1-207ENST00000588738 FAM90A26D6RGX4 464 aa14.22□□□□□ -0.13
ERCC1-207ENST00000588738 C8orf88P0DMB2 117 aa14.22□□□□□ -0.13
ERCC1-207ENST00000588738 NPY1RP25929 384 aa14.22□□□□□ -0.13
ERCC1-207ENST00000588738 CD69Q07108 199 aa14.22□□□□□ -0.13
ERCC1-207ENST00000588738 C20orf24Q9BUV8 137 aa14.22□□□□□ -0.13
ERCC1-207ENST00000588738 FAM240BA0A1B0GVZ2 78 aa14.21□□□□□ -0.13
ERCC1-207ENST00000588738 C15orf62A8K5M9 175 aa14.21□□□□□ -0.13
ERCC1-207ENST00000588738 K7EMT4 169 aa14.21□□□□□ -0.13
ERCC1-207ENST00000588738 SCGB2A1O75556 95 aa14.21□□□□□ -0.13
ERCC1-207ENST00000588738 MED6O75586 246 aa14.21□□□□□ -0.13
ERCC1-207ENST00000588738 YIF1AO95070 293 aa14.21□□□□□ -0.13
ERCC1-207ENST00000588738 TMEM50AO95807 157 aa14.21□□□□□ -0.13
ERCC1-207ENST00000588738 IFNA21P01568 189 aa14.21□□□□□ -0.13
ERCC1-207ENST00000588738 ATP5IP56385 69 aaPredicted RBP14.21□□□□□ -0.13
ERCC1-207ENST00000588738 MLANAQ16655 118 aa14.21□□□□□ -0.13
ERCC1-207ENST00000588738 GTSCR1Q86UQ5 136 aa14.21□□□□□ -0.13
ERCC1-207ENST00000588738 OR4X1Q8NH49 305 aa14.21□□□□□ -0.13
ERCC1-207ENST00000588738 MLXQ9UH92 298 aa14.21□□□□□ -0.13
ERCC1-207ENST00000588738 TRAV6A0A075B6T7 132 aa14.2□□□□□ -0.14
ERCC1-207ENST00000588738 CLN5O75503 358 aa14.2□□□□□ -0.14
ERCC1-207ENST00000588738 ADAP1O75689 374 aa14.2□□□□□ -0.14
ERCC1-207ENST00000588738 UPK1BO75841 260 aa14.2□□□□□ -0.14
ERCC1-207ENST00000588738 SLC25A4P12235 298 aa14.2□□□□□ -0.14
ERCC1-207ENST00000588738 ASAH1Q13510 395 aa14.2□□□□□ -0.14
ERCC1-207ENST00000588738 ETFRF1Q6IPR1 90 aa14.2□□□□□ -0.14
ERCC1-207ENST00000588738 TMEM170AQ8WVE7 144 aa14.2□□□□□ -0.14
ERCC1-207ENST00000588738 NUDT15Q9NV35 164 aa14.2□□□□□ -0.14
ERCC1-207ENST00000588738 TBC1D24Q9ULP9 559 aa14.2□□□□□ -0.14
ERCC1-207ENST00000588738 IGHV3OR16-8A0A075B7F1 116 aa14.19□□□□□ -0.14
ERCC1-207ENST00000588738 GUCA2BQ16661 112 aa14.19□□□□□ -0.14
ERCC1-207ENST00000588738 C11orf87Q6NUJ2 197 aa14.19□□□□□ -0.14
ERCC1-207ENST00000588738 BTNL8Q6UX41 500 aa14.19□□□□□ -0.14
ERCC1-207ENST00000588738 Q8N1Y9 231 aa14.19□□□□□ -0.14
ERCC1-207ENST00000588738 MITD1Q8WV92 249 aa14.19□□□□□ -0.14
ERCC1-207ENST00000588738 TRAV30A0A087WSZ9 112 aa14.18□□□□□ -0.14
ERCC1-207ENST00000588738 ZNF785A8K8V0 405 aa14.18□□□□□ -0.14
ERCC1-207ENST00000588738 SYNGR2O43760 224 aa14.18□□□□□ -0.14
ERCC1-207ENST00000588738 IFNA4P05014 189 aa14.18□□□□□ -0.14
ERCC1-207ENST00000588738 H2AFB2P0C5Z0 115 aa14.18□□□□□ -0.14
ERCC1-207ENST00000588738 ZNF600Q6ZNG1 722 aa14.18□□□□□ -0.14
ERCC1-207ENST00000588738 OR52B4Q8NGK2 314 aa14.18□□□□□ -0.14
ERCC1-207ENST00000588738 OR10C1Q96KK4 312 aa14.18□□□□□ -0.14
ERCC1-207ENST00000588738 CIB3Q96Q77 187 aaPredicted RBP14.18□□□□□ -0.14
ERCC1-207ENST00000588738 MRPL36Q9P0J6 103 aaKnown RBP14.18□□□□□ -0.14
ERCC1-207ENST00000588738 SELENOKQ9Y6D0 94 aa14.18□□□□□ -0.14
ERCC1-207ENST00000588738 COL7A1Q02388 2944 aa14.18□□□□□ -0.14
ERCC1-207ENST00000588738 TRAV25A0A0B4J276 109 aa14.17□□□□□ -0.14
ERCC1-207ENST00000588738 ZNF207O43670 478 aaKnown RBP14.17□□□□□ -0.14
ERCC1-207ENST00000588738 IAPPP10997 89 aa14.17□□□□□ -0.14
ERCC1-207ENST00000588738 PRSS54Q6PEW0 395 aa14.17□□□□□ -0.14
ERCC1-207ENST00000588738 RBPMS2Q6ZRY4 209 aaKnown RBP14.17□□□□□ -0.14
ERCC1-207ENST00000588738 TMEM61Q8N0U2 210 aa14.17□□□□□ -0.14
ERCC1-207ENST00000588738 TMEM116Q8NCL8 245 aa14.17□□□□□ -0.14
ERCC1-207ENST00000588738 WDR89Q96FK6 387 aaPredicted RBP14.17□□□□□ -0.14
ERCC1-207ENST00000588738 ZNF414Q96IQ9 312 aa14.17□□□□□ -0.14
ERCC1-207ENST00000588738 GINS3Q9BRX5 216 aa14.17□□□□□ -0.14
ERCC1-207ENST00000588738 MAGT1Q9H0U3 335 aa14.17□□□□□ -0.14
ERCC1-207ENST00000588738 TRAV14DV4A0A0A6YYC5 116 aa14.16□□□□□ -0.14
ERCC1-207ENST00000588738 MPTX1A8MV57 137 aa14.16□□□□□ -0.14
ERCC1-207ENST00000588738 RND2P52198 227 aa14.16□□□□□ -0.14
ERCC1-207ENST00000588738 RAB11AP62491 216 aa14.16□□□□□ -0.14
ERCC1-207ENST00000588738 RPP30P78346 268 aaKnown RBP14.16□□□□□ -0.14
ERCC1-207ENST00000588738 TOMM20LQ6UXN7 152 aa14.16□□□□□ -0.14
ERCC1-207ENST00000588738 SMPXQ9UHP9 88 aa14.16□□□□□ -0.14
ERCC1-207ENST00000588738 PUS1Q9Y606 427 aaKnown RBP eCLIP14.16□□□□□ -0.14
ERCC1-207ENST00000588738 WRBO00258 174 aa14.15□□□□□ -0.14
ERCC1-207ENST00000588738 SCAF4O95104 1147 aaKnown RBP14.15□□□□□ -0.14
ERCC1-207ENST00000588738 NHLRC4P0CG21 123 aaPredicted RBP14.15□□□□□ -0.14
ERCC1-207ENST00000588738 IGHV4-30-4P0DP06 118 aa14.15□□□□□ -0.14
ERCC1-207ENST00000588738 CD81P60033 236 aa14.15□□□□□ -0.14
ERCC1-207ENST00000588738 ID3Q02535 119 aa14.15□□□□□ -0.14
ERCC1-207ENST00000588738 LAMTOR1Q6IAA8 161 aa14.15□□□□□ -0.14
ERCC1-207ENST00000588738 OR1S2Q8NGQ3 325 aa14.15□□□□□ -0.14
ERCC1-207ENST00000588738 ENKURQ8TC29 256 aa14.15□□□□□ -0.14
ERCC1-207ENST00000588738 ZNF431Q8TF32 576 aaPredicted RBP14.15□□□□□ -0.14
ERCC1-207ENST00000588738 IGHV7-4-1A0A0J9YVY3 117 aa14.14□□□□□ -0.15
ERCC1-207ENST00000588738 A8MZ25 164 aa14.14□□□□□ -0.15
ERCC1-207ENST00000588738 IGKV1-17P01599 117 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms