RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 LGI3Q8N145 548 aa7.86□□□□□ -1.15
TPM4-209ENST00000588483 DUSP18Q8NEJ0 188 aa7.86□□□□□ -1.15
TPM4-209ENST00000588483 OR4X1Q8NH49 305 aa7.86□□□□□ -1.15
TPM4-209ENST00000588483 PINX1Q96BK5 328 aaKnown RBP7.86□□□□□ -1.15
TPM4-209ENST00000588483 SDHCQ99643 169 aaPredicted RBP7.86□□□□□ -1.15
TPM4-209ENST00000588483 FAM110AQ9BQ89 295 aa7.86□□□□□ -1.15
TPM4-209ENST00000588483 HSPB7Q9UBY9 170 aa7.86□□□□□ -1.15
TPM4-209ENST00000588483 LYSTQ99698 3801 aa7.85□□□□□ -1.15
TPM4-209ENST00000588483 IGHV7-4-1A0A0J9YVY3 117 aa7.85□□□□□ -1.15
TPM4-209ENST00000588483 A0A1B0GU03 582 aa7.85□□□□□ -1.15
TPM4-209ENST00000588483 OR11H12B2RN74 326 aa7.85□□□□□ -1.15
TPM4-209ENST00000588483 PITX3O75364 302 aa7.85□□□□□ -1.15
TPM4-209ENST00000588483 CLN5O75503 358 aa7.85□□□□□ -1.15
TPM4-209ENST00000588483 TMEM50AO95807 157 aa7.85□□□□□ -1.15
TPM4-209ENST00000588483 SLC25A6P12236 298 aa7.85□□□□□ -1.15
TPM4-209ENST00000588483 TNFRSF9Q07011 255 aa7.85□□□□□ -1.15
TPM4-209ENST00000588483 SMCO1Q147U7 214 aa7.85□□□□□ -1.15
TPM4-209ENST00000588483 BAK1Q16611 211 aa7.85□□□□□ -1.15
TPM4-209ENST00000588483 GUCA2BQ16661 112 aa7.85□□□□□ -1.15
TPM4-209ENST00000588483 ZNF600Q6ZNG1 722 aa7.85□□□□□ -1.15
TPM4-209ENST00000588483 RBPMS2Q6ZRY4 209 aaKnown RBP7.85□□□□□ -1.15
TPM4-209ENST00000588483 LYZL2Q7Z4W2 148 aa7.85□□□□□ -1.15
TPM4-209ENST00000588483 SLC24A4Q8NFF2 622 aa7.85□□□□□ -1.15
TPM4-209ENST00000588483 RNASEH2CQ8TDP1 164 aaKnown RBP7.85□□□□□ -1.15
TPM4-209ENST00000588483 TMEM170AQ8WVE7 144 aa7.85□□□□□ -1.15
TPM4-209ENST00000588483 SPATA25Q9BR10 227 aa7.85□□□□□ -1.15
TPM4-209ENST00000588483 TUBA4BQ9H853 241 aa7.85□□□□□ -1.15
TPM4-209ENST00000588483 ZFAND3Q9H8U3 227 aa7.85□□□□□ -1.15
TPM4-209ENST00000588483 PRR13Q9NZ81 148 aa7.85□□□□□ -1.15
TPM4-209ENST00000588483 SMPXQ9UHP9 88 aa7.85□□□□□ -1.15
TPM4-209ENST00000588483 STARD9Q9P2P6 4700 aa7.85□□□□□ -1.15
TPM4-209ENST00000588483 TRAV14DV4A0A0A6YYC5 116 aa7.84□□□□□ -1.15
TPM4-209ENST00000588483 RPS10-NUDT3A0A1W2PQS6 291 aa7.84□□□□□ -1.15
TPM4-209ENST00000588483 CHEK1O14757 476 aa7.84□□□□□ -1.15
TPM4-209ENST00000588483 SCAF4O95104 1147 aaKnown RBP7.84□□□□□ -1.15
TPM4-209ENST00000588483 IGHV3-48P01763 117 aa7.84□□□□□ -1.15
TPM4-209ENST00000588483 CD5P06127 495 aa7.84□□□□□ -1.15
TPM4-209ENST00000588483 SLC25A4P12235 298 aa7.84□□□□□ -1.15
TPM4-209ENST00000588483 OPRK1P41145 380 aa7.84□□□□□ -1.15
TPM4-209ENST00000588483 ATP5IP56385 69 aaPredicted RBP7.84□□□□□ -1.15
TPM4-209ENST00000588483 LAMTOR1Q6IAA8 161 aa7.84□□□□□ -1.15
TPM4-209ENST00000588483 TOMM20LQ6UXN7 152 aa7.84□□□□□ -1.15
TPM4-209ENST00000588483 LINC00299Q6ZSB3 139 aa7.84□□□□□ -1.15
TPM4-209ENST00000588483 NOXA1Q86UR1 476 aa7.84□□□□□ -1.15
TPM4-209ENST00000588483 DEFB125Q8N687 156 aa7.84□□□□□ -1.15
TPM4-209ENST00000588483 TMEM116Q8NCL8 245 aa7.84□□□□□ -1.15
TPM4-209ENST00000588483 OR52B4Q8NGK2 314 aa7.84□□□□□ -1.15
TPM4-209ENST00000588483 CITED4Q96RK1 184 aa7.84□□□□□ -1.15
TPM4-209ENST00000588483 C7orf50Q9BRJ6 194 aaKnown RBP7.84□□□□□ -1.15
TPM4-209ENST00000588483 GINS3Q9BRX5 216 aa7.84□□□□□ -1.15
TPM4-209ENST00000588483 C20orf24Q9BUV8 137 aa7.84□□□□□ -1.15
TPM4-209ENST00000588483 VSIRQ9H7M9 311 aa7.84□□□□□ -1.15
TPM4-209ENST00000588483 HEYLQ9NQ87 328 aaPredicted RBP7.84□□□□□ -1.15
TPM4-209ENST00000588483 MRPL36Q9P0J6 103 aaKnown RBP7.84□□□□□ -1.15
TPM4-209ENST00000588483 U3KQ87 197 aa7.84□□□□□ -1.15
TPM4-209ENST00000588483 TRAV30A0A087WSZ9 112 aa7.83□□□□□ -1.16
TPM4-209ENST00000588483 RBMY1BA6NDE4 496 aaKnown RBP7.83□□□□□ -1.16
TPM4-209ENST00000588483 RBMY1EA6NEQ0 496 aaKnown RBP7.83□□□□□ -1.16
TPM4-209ENST00000588483 CEBPZOSA8MTT3 80 aa7.83□□□□□ -1.16
TPM4-209ENST00000588483 FAM90A26D6RGX4 464 aa7.83□□□□□ -1.16
TPM4-209ENST00000588483 SCGB2A1O75556 95 aa7.83□□□□□ -1.16
TPM4-209ENST00000588483 NDUFB6O95139 128 aa7.83□□□□□ -1.16
TPM4-209ENST00000588483 SFT2D2O95562 160 aa7.83□□□□□ -1.16
TPM4-209ENST00000588483 IGKV1-17P01599 117 aa7.83□□□□□ -1.16
TPM4-209ENST00000588483 RBMY1DP0C7P1 496 aaKnown RBP7.83□□□□□ -1.16
TPM4-209ENST00000588483 NPY1RP25929 384 aa7.83□□□□□ -1.16
TPM4-209ENST00000588483 BTCP35070 178 aa7.83□□□□□ -1.16
TPM4-209ENST00000588483 PPP1R1AQ13522 171 aa7.83□□□□□ -1.16
TPM4-209ENST00000588483 TRIQKQ629K1 86 aa7.83□□□□□ -1.16
TPM4-209ENST00000588483 FAM90A2PQ658T7 463 aa7.83□□□□□ -1.16
TPM4-209ENST00000588483 TMED4Q7Z7H5 227 aa7.83□□□□□ -1.16
TPM4-209ENST00000588483 CENPSQ8N2Z9 138 aa7.83□□□□□ -1.16
TPM4-209ENST00000588483 DTD1Q8TEA8 209 aa7.83□□□□□ -1.16
TPM4-209ENST00000588483 RNF2Q99496 336 aa7.83□□□□□ -1.16
TPM4-209ENST00000588483 RHPN1-AS1Q9BWJ2 59 aa7.83□□□□□ -1.16
TPM4-209ENST00000588483 WFDC10AQ9H1F0 79 aa7.83□□□□□ -1.16
TPM4-209ENST00000588483 HIPK2Q9H2X6 1198 aa7.83□□□□□ -1.16
TPM4-209ENST00000588483 SRD5A3Q9H8P0 318 aa7.83□□□□□ -1.16
TPM4-209ENST00000588483 TMED3Q9Y3Q3 217 aa7.83□□□□□ -1.16
TPM4-209ENST00000588483 PUS1Q9Y606 427 aaKnown RBP eCLIP7.83□□□□□ -1.16
TPM4-209ENST00000588483 IGHV3OR16-8A0A075B7F1 116 aa7.82□□□□□ -1.16
TPM4-209ENST00000588483 OR4C46A6NHA9 309 aa7.82□□□□□ -1.16
TPM4-209ENST00000588483 C3orf84H3BNL1 204 aa7.82□□□□□ -1.16
TPM4-209ENST00000588483 ZNF207O43670 478 aaKnown RBP7.82□□□□□ -1.16
TPM4-209ENST00000588483 YIF1AO95070 293 aa7.82□□□□□ -1.16
TPM4-209ENST00000588483 IGLC1P0CG04 106 aa7.82□□□□□ -1.16
TPM4-209ENST00000588483 IL7P13232 177 aa7.82□□□□□ -1.16
TPM4-209ENST00000588483 BMI1P35226 326 aa7.82□□□□□ -1.16
TPM4-209ENST00000588483 MLANAQ16655 118 aa7.82□□□□□ -1.16
TPM4-209ENST00000588483 ODF3L2Q3SX64 289 aa7.82□□□□□ -1.16
TPM4-209ENST00000588483 ETFRF1Q6IPR1 90 aa7.82□□□□□ -1.16
TPM4-209ENST00000588483 PRSS54Q6PEW0 395 aa7.82□□□□□ -1.16
TPM4-209ENST00000588483 EDA2RQ9HAV5 297 aa7.82□□□□□ -1.16
TPM4-209ENST00000588483 TRAV2A0A0B4J234 112 aa7.81□□□□□ -1.16
TPM4-209ENST00000588483 CENPXA8MT69 81 aa7.81□□□□□ -1.16
TPM4-209ENST00000588483 VAMP1P23763 118 aa7.81□□□□□ -1.16
TPM4-209ENST00000588483 CRYBB3P26998 211 aa7.81□□□□□ -1.16
TPM4-209ENST00000588483 INPP1P49441 399 aa7.81□□□□□ -1.16
TPM4-209ENST00000588483 YPEL3P61236 119 aaPredicted RBP7.81□□□□□ -1.16
TPM4-209ENST00000588483 CNPY1Q3B7I2 92 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms