RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 LMO4P61968 165 aa11.83□□□□□ -0.52
CCDC43-203ENST00000588210 UTF1Q5T230 341 aa11.83□□□□□ -0.52
CCDC43-203ENST00000588210 GBGT1Q8N5D6 347 aa11.83□□□□□ -0.52
CCDC43-203ENST00000588210 SSMEM1Q8WWF3 244 aa11.83□□□□□ -0.52
CCDC43-203ENST00000588210 NOL4LQ96MY1 436 aaPredicted RBP11.83□□□□□ -0.52
CCDC43-203ENST00000588210 IDI2-AS1Q9NZ38 188 aa11.83□□□□□ -0.52
CCDC43-203ENST00000588210 IGHV4-31P0DP07 118 aa11.82□□□□□ -0.52
CCDC43-203ENST00000588210 RAB31Q13636 194 aa11.82□□□□□ -0.52
CCDC43-203ENST00000588210 PRSS8Q16651 343 aa11.82□□□□□ -0.52
CCDC43-203ENST00000588210 FAM201AQ5SY85 155 aa11.82□□□□□ -0.52
CCDC43-203ENST00000588210 CYB5R2Q6BCY4 276 aa11.82□□□□□ -0.52
CCDC43-203ENST00000588210 TEX38Q6PEX7 206 aa11.82□□□□□ -0.52
CCDC43-203ENST00000588210 ZNF439Q8NDP4 499 aa11.82□□□□□ -0.52
CCDC43-203ENST00000588210 SGMS2Q8NHU3 365 aa11.82□□□□□ -0.52
CCDC43-203ENST00000588210 LEAP2Q969E1 77 aa11.82□□□□□ -0.52
CCDC43-203ENST00000588210 ENY2Q9NPA8 101 aa11.82□□□□□ -0.52
CCDC43-203ENST00000588210 TRAV9-1A0A075B6T8 112 aa11.82□□□□□ -0.52
CCDC43-203ENST00000588210 LY6G6DO95868 133 aa11.82□□□□□ -0.52
CCDC43-203ENST00000588210 MT-CO2P00403 227 aa11.82□□□□□ -0.52
CCDC43-203ENST00000588210 SELLP14151 372 aa11.82□□□□□ -0.52
CCDC43-203ENST00000588210 PRR20EP86478 221 aa11.82□□□□□ -0.52
CCDC43-203ENST00000588210 PRR20CP86479 221 aa11.82□□□□□ -0.52
CCDC43-203ENST00000588210 PRR20DP86480 221 aa11.82□□□□□ -0.52
CCDC43-203ENST00000588210 PRR20BP86481 221 aa11.82□□□□□ -0.52
CCDC43-203ENST00000588210 PRR20AP86496 221 aa11.82□□□□□ -0.52
CCDC43-203ENST00000588210 STUMQ69YW2 141 aa11.82□□□□□ -0.52
CCDC43-203ENST00000588210 GSX1Q9H4S2 264 aaPredicted RBP11.82□□□□□ -0.52
CCDC43-203ENST00000588210 LY96Q9Y6Y9 160 aa11.82□□□□□ -0.52
CCDC43-203ENST00000588210 ARL2-SNX15V9GYD0 113 aa11.82□□□□□ -0.52
CCDC43-203ENST00000588210 TRGV10A0A0A0MS01 117 aa11.81□□□□□ -0.52
CCDC43-203ENST00000588210 C9JCJ5 164 aa11.81□□□□□ -0.52
CCDC43-203ENST00000588210 CD5LO43866 347 aa11.81□□□□□ -0.52
CCDC43-203ENST00000588210 CA2P00918 260 aa11.81□□□□□ -0.52
CCDC43-203ENST00000588210 YPEL3P61236 119 aaPredicted RBP11.81□□□□□ -0.52
CCDC43-203ENST00000588210 KRTAP1-1Q07627 177 aa11.81□□□□□ -0.52
CCDC43-203ENST00000588210 TMEM30BQ3MIR4 351 aa11.81□□□□□ -0.52
CCDC43-203ENST00000588210 TEX36Q5VZQ5 186 aa11.81□□□□□ -0.52
CCDC43-203ENST00000588210 SPATA31B1PQ5VZV4 182 aa11.81□□□□□ -0.52
CCDC43-203ENST00000588210 ZNF600Q6ZNG1 722 aa11.81□□□□□ -0.52
CCDC43-203ENST00000588210 TCF23Q7RTU1 214 aa11.81□□□□□ -0.52
CCDC43-203ENST00000588210 OR10G8Q8NGN5 311 aa11.81□□□□□ -0.52
CCDC43-203ENST00000588210 CORO2AQ92828 525 aa11.81□□□□□ -0.52
CCDC43-203ENST00000588210 SEPSECSQ9HD40 501 aaKnown RBP11.81□□□□□ -0.52
CCDC43-203ENST00000588210 A8MWP6 167 aa11.8□□□□□ -0.52
CCDC43-203ENST00000588210 AREGP15514 252 aa11.8□□□□□ -0.52
CCDC43-203ENST00000588210 ZNF664Q8N3J9 261 aa11.8□□□□□ -0.52
CCDC43-203ENST00000588210 LINC01356Q8N9X3 169 aa11.8□□□□□ -0.52
CCDC43-203ENST00000588210 OCC1Q8TAD7 63 aa11.8□□□□□ -0.52
CCDC43-203ENST00000588210 LINC00574Q9H8X3 128 aa11.8□□□□□ -0.52
CCDC43-203ENST00000588210 SLC25A10Q9UBX3 287 aaPredicted RBP11.8□□□□□ -0.52
CCDC43-203ENST00000588210 PRNDQ9UKY0 176 aa11.8□□□□□ -0.52
CCDC43-203ENST00000588210 B4DSR2 109 aa11.8□□□□□ -0.52
CCDC43-203ENST00000588210 RPL31P62899 125 aaKnown RBP11.8□□□□□ -0.52
CCDC43-203ENST00000588210 MRPL41Q8IXM3 137 aaKnown RBP11.8□□□□□ -0.52
CCDC43-203ENST00000588210 LYG1Q8N1E2 194 aa11.8□□□□□ -0.52
CCDC43-203ENST00000588210 DEFB108BQ8NET1 73 aa11.8□□□□□ -0.52
CCDC43-203ENST00000588210 UHRF2Q96PU4 802 aa11.8□□□□□ -0.52
CCDC43-203ENST00000588210 ZNF257Q9Y2Q1 563 aa11.8□□□□□ -0.52
CCDC43-203ENST00000588210 OR51B2Q9Y5P1 312 aa11.8□□□□□ -0.52
CCDC43-203ENST00000588210 IQCJQ1A5X6 159 aa11.79□□□□□ -0.52
CCDC43-203ENST00000588210 GAFA1Q96PS6 74 aa11.79□□□□□ -0.52
CCDC43-203ENST00000588210 IL36BQ9NZH7 164 aa11.79□□□□□ -0.52
CCDC43-203ENST00000588210 ZNF705GA8MUZ8 300 aaPredicted RBP11.79□□□□□ -0.52
CCDC43-203ENST00000588210 LINC00869P0C866 280 aa11.79□□□□□ -0.52
CCDC43-203ENST00000588210 PRCDQ00LT1 54 aa11.79□□□□□ -0.52
CCDC43-203ENST00000588210 LBHQ53QV2 105 aaPredicted RBP11.79□□□□□ -0.52
CCDC43-203ENST00000588210 DUX4L9Q6RFH8 374 aaPredicted RBP11.79□□□□□ -0.52
CCDC43-203ENST00000588210 PLEKHA3Q9HB20 300 aa11.79□□□□□ -0.52
CCDC43-203ENST00000588210 ABCA1O95477 2261 aa11.78□□□□□ -0.52
CCDC43-203ENST00000588210 K7EN84 100 aa11.78□□□□□ -0.52
CCDC43-203ENST00000588210 UPK2O00526 184 aa11.78□□□□□ -0.52
CCDC43-203ENST00000588210 TNFRSF13BO14836 293 aaPredicted RBP11.78□□□□□ -0.52
CCDC43-203ENST00000588210 TGFAP01135 160 aa11.78□□□□□ -0.52
CCDC43-203ENST00000588210 SELENOTP62341 195 aa11.78□□□□□ -0.52
CCDC43-203ENST00000588210 NDUFAF3Q9BU61 184 aa11.78□□□□□ -0.52
CCDC43-203ENST00000588210 SLC45A2Q9UMX9 530 aa11.78□□□□□ -0.52
CCDC43-203ENST00000588210 FOXH1O75593 365 aa11.77□□□□□ -0.52
CCDC43-203ENST00000588210 MSMBP08118 114 aa11.77□□□□□ -0.52
CCDC43-203ENST00000588210 MYOD1P15172 320 aa11.77□□□□□ -0.52
CCDC43-203ENST00000588210 HNF1AP20823 631 aa11.77□□□□□ -0.52
CCDC43-203ENST00000588210 ADMP35318 185 aa11.77□□□□□ -0.52
CCDC43-203ENST00000588210 ATP5IP56385 69 aaPredicted RBP11.77□□□□□ -0.52
CCDC43-203ENST00000588210 SSX2Q16385 188 aa11.77□□□□□ -0.52
CCDC43-203ENST00000588210 ZNF788Q6ZQV5 615 aa11.77□□□□□ -0.52
CCDC43-203ENST00000588210 SLC25A48Q6ZT89 311 aaKnown RBP11.77□□□□□ -0.52
CCDC43-203ENST00000588210 BEND2Q8NDZ0 799 aa11.77□□□□□ -0.52
CCDC43-203ENST00000588210 OR8B3Q8NGG8 313 aa11.77□□□□□ -0.52
CCDC43-203ENST00000588210 OR4P4Q8NGL7 312 aa11.77□□□□□ -0.52
CCDC43-203ENST00000588210 EAF1Q96JC9 268 aaPredicted RBP11.77□□□□□ -0.52
CCDC43-203ENST00000588210 SLC35E1Q96K37 410 aa11.77□□□□□ -0.52
CCDC43-203ENST00000588210 OR8B2Q96RD0 313 aa11.77□□□□□ -0.52
CCDC43-203ENST00000588210 J3QR06 171 aa11.77□□□□□ -0.53
CCDC43-203ENST00000588210 LYPD2Q6UXB3 125 aa11.77□□□□□ -0.53
CCDC43-203ENST00000588210 MIR17HGQ75NE6 70 aa11.77□□□□□ -0.53
CCDC43-203ENST00000588210 C2orf88Q9BSF0 95 aa11.77□□□□□ -0.53
CCDC43-203ENST00000588210 TMEM167BQ9NRX6 74 aa11.77□□□□□ -0.53
CCDC43-203ENST00000588210 KAAG1Q9UBP8 84 aa11.77□□□□□ -0.53
CCDC43-203ENST00000588210 CSPG4Q6UVK1 2322 aa11.77□□□□□ -0.53
CCDC43-203ENST00000588210 ZANQ9Y493 2812 aa11.76□□□□□ -0.53
CCDC43-203ENST00000588210 GNG10P50151 68 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms