RNA–Protein interactions for RNA: ENST00000588059.5

VPS4B-202, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 1,252 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-202ENST00000588059 IGKV1D-39P04432 117 aa8.02□□□□□ -1.13
VPS4B-202ENST00000588059 HLA-DMBP28068 263 aa8.02□□□□□ -1.13
VPS4B-202ENST00000588059 TFPI2P48307 235 aa8.02□□□□□ -1.13
VPS4B-202ENST00000588059 WT1-ASQ06250 92 aa8.02□□□□□ -1.13
VPS4B-202ENST00000588059 TMEM187Q14656 261 aa8.02□□□□□ -1.13
VPS4B-202ENST00000588059 SP6Q3SY56 376 aa8.02□□□□□ -1.13
VPS4B-202ENST00000588059 SPSB3Q6PJ21 355 aa8.02□□□□□ -1.13
VPS4B-202ENST00000588059 Q6ZTC4 211 aa8.02□□□□□ -1.13
VPS4B-202ENST00000588059 GDPD1Q8N9F7 314 aa8.02□□□□□ -1.13
VPS4B-202ENST00000588059 OR4C16Q8NGL9 310 aa8.02□□□□□ -1.13
VPS4B-202ENST00000588059 ZNF414Q96IQ9 312 aa8.02□□□□□ -1.13
VPS4B-202ENST00000588059 SEC22AQ96IW7 307 aa8.02□□□□□ -1.13
VPS4B-202ENST00000588059 TMEM56Q96MV1 263 aa8.02□□□□□ -1.13
VPS4B-202ENST00000588059 TP53RKQ96S44 253 aa8.02□□□□□ -1.13
VPS4B-202ENST00000588059 NDUFA4L2Q9NRX3 87 aa8.02□□□□□ -1.13
VPS4B-202ENST00000588059 C14orf166Q9Y224 244 aaKnown RBP8.02□□□□□ -1.13
VPS4B-202ENST00000588059 IGHV3-21A0A0B4J1V1 117 aa8.01□□□□□ -1.13
VPS4B-202ENST00000588059 TRAV10A0A0B4J240 114 aa8.01□□□□□ -1.13
VPS4B-202ENST00000588059 IGHV4-28A0A0C4DH34 117 aa8.01□□□□□ -1.13
VPS4B-202ENST00000588059 TEX13DA0A0J9YY54 714 aaPredicted RBP8.01□□□□□ -1.13
VPS4B-202ENST00000588059 DBX1A6NMT0 343 aa8.01□□□□□ -1.13
VPS4B-202ENST00000588059 C15orf62A8K5M9 175 aa8.01□□□□□ -1.13
VPS4B-202ENST00000588059 F8W735 103 aaPredicted RBP8.01□□□□□ -1.13
VPS4B-202ENST00000588059 M0R2N4 97 aa8.01□□□□□ -1.13
VPS4B-202ENST00000588059 GSTZ1O43708 216 aaPredicted RBP8.01□□□□□ -1.13
VPS4B-202ENST00000588059 ATG12O94817 140 aa8.01□□□□□ -1.13
VPS4B-202ENST00000588059 RBMY1A1P0DJD3 496 aaKnown RBP8.01□□□□□ -1.13
VPS4B-202ENST00000588059 RBMY1CP0DJD4 496 aa8.01□□□□□ -1.13
VPS4B-202ENST00000588059 AKR1C2P52895 323 aa8.01□□□□□ -1.13
VPS4B-202ENST00000588059 CMC4P56277 68 aaPredicted RBP8.01□□□□□ -1.13
VPS4B-202ENST00000588059 RBMY1FQ15415 496 aaKnown RBP8.01□□□□□ -1.13
VPS4B-202ENST00000588059 IZUMO4Q1ZYL8 232 aa8.01□□□□□ -1.13
VPS4B-202ENST00000588059 PVRIGQ6DKI7 326 aa8.01□□□□□ -1.13
VPS4B-202ENST00000588059 CADM3Q8N126 398 aa8.01□□□□□ -1.13
VPS4B-202ENST00000588059 POM121L12Q8N7R1 296 aa8.01□□□□□ -1.13
VPS4B-202ENST00000588059 RNASE11Q8TAA1 199 aaKnown RBP8.01□□□□□ -1.13
VPS4B-202ENST00000588059 RNF126Q9BV68 326 aa8.01□□□□□ -1.13
VPS4B-202ENST00000588059 NXF2Q9GZY0 626 aaKnown RBP8.01□□□□□ -1.13
VPS4B-202ENST00000588059 TMEM14BQ9NUH8 114 aa8.01□□□□□ -1.13
VPS4B-202ENST00000588059 MCUBQ9NWR8 336 aa8.01□□□□□ -1.13
VPS4B-202ENST00000588059 SMPXQ9UHP9 88 aa8.01□□□□□ -1.13
VPS4B-202ENST00000588059 AGRNO00468 2067 aa8□□□□□ -1.13
VPS4B-202ENST00000588059 IGKV3-7A0A075B6H7 116 aa8□□□□□ -1.13
VPS4B-202ENST00000588059 IGHV7-4-1A0A0J9YVY3 117 aa8□□□□□ -1.13
VPS4B-202ENST00000588059 ANKRD20A5PA0PJZ0 165 aa8□□□□□ -1.13
VPS4B-202ENST00000588059 CHEK1O14757 476 aa8□□□□□ -1.13
VPS4B-202ENST00000588059 AMBPP02760 352 aa8□□□□□ -1.13
VPS4B-202ENST00000588059 S100A5P33763 92 aa8□□□□□ -1.13
VPS4B-202ENST00000588059 PYDC2Q56P42 97 aa8□□□□□ -1.13
VPS4B-202ENST00000588059 SPINK9Q5DT21 86 aa8□□□□□ -1.13
VPS4B-202ENST00000588059 OR51S1Q8NGJ8 323 aa8□□□□□ -1.13
VPS4B-202ENST00000588059 ATP6V0BQ99437 205 aa8□□□□□ -1.13
VPS4B-202ENST00000588059 PRRT1Q99946 306 aa8□□□□□ -1.13
VPS4B-202ENST00000588059 RHPN1-AS1Q9BWJ2 59 aa8□□□□□ -1.13
VPS4B-202ENST00000588059 F11RQ9Y624 299 aaKnown RBP8□□□□□ -1.13
VPS4B-202ENST00000588059 IGHV3-49A0A0A0MS15 119 aa7.99□□□□□ -1.13
VPS4B-202ENST00000588059 IFNA17P01571 189 aa7.99□□□□□ -1.13
VPS4B-202ENST00000588059 IGKV1-5P01602 117 aa7.99□□□□□ -1.13
VPS4B-202ENST00000588059 OR5AC1P0C628 307 aa7.99□□□□□ -1.13
VPS4B-202ENST00000588059 P0DMU3 169 aa7.99□□□□□ -1.13
VPS4B-202ENST00000588059 FAM231AP0DMU4 169 aa7.99□□□□□ -1.13
VPS4B-202ENST00000588059 FAM231CP0DMU5 169 aa7.99□□□□□ -1.13
VPS4B-202ENST00000588059 HSPE1P61604 102 aaKnown RBP7.99□□□□□ -1.13
VPS4B-202ENST00000588059 SURF2Q15527 256 aaPredicted RBP7.99□□□□□ -1.13
VPS4B-202ENST00000588059 LGALS9BQ3B8N2 356 aa7.99□□□□□ -1.13
VPS4B-202ENST00000588059 FAM90A2PQ658T7 463 aa7.99□□□□□ -1.13
VPS4B-202ENST00000588059 GBGT1Q8N5D6 347 aa7.99□□□□□ -1.13
VPS4B-202ENST00000588059 UBAC2Q8NBM4 344 aa7.99□□□□□ -1.13
VPS4B-202ENST00000588059 TMEM116Q8NCL8 245 aa7.99□□□□□ -1.13
VPS4B-202ENST00000588059 SCARB1Q8WTV0 552 aa7.99□□□□□ -1.13
VPS4B-202ENST00000588059 RRNAD1Q96FB5 475 aaKnown RBP7.99□□□□□ -1.13
VPS4B-202ENST00000588059 MISP3Q96FF7 219 aa7.99□□□□□ -1.13
VPS4B-202ENST00000588059 SOSTQ9BQB4 213 aa7.99□□□□□ -1.13
VPS4B-202ENST00000588059 RTBDNQ9BSG5 229 aaPredicted RBP7.99□□□□□ -1.13
VPS4B-202ENST00000588059 PDCD10Q9BUL8 212 aa7.99□□□□□ -1.13
VPS4B-202ENST00000588059 RBM38Q9H0Z9 239 aaKnown RBP7.99□□□□□ -1.13
VPS4B-202ENST00000588059 C21orf62Q9NYP8 219 aa7.99□□□□□ -1.13
VPS4B-202ENST00000588059 SCP2D1Q9UJQ7 156 aa7.99□□□□□ -1.13
VPS4B-202ENST00000588059 ELOA3CA0A087WX78 387 aaPredicted RBP7.98□□□□□ -1.13
VPS4B-202ENST00000588059 K7EIM0 57 aa7.98□□□□□ -1.13
VPS4B-202ENST00000588059 B3GALNT1O75752 331 aa7.98□□□□□ -1.13
VPS4B-202ENST00000588059 GIG44P09565 113 aaPredicted RBP7.98□□□□□ -1.13
VPS4B-202ENST00000588059 MIFP14174 115 aa7.98□□□□□ -1.13
VPS4B-202ENST00000588059 UCP1P25874 307 aa7.98□□□□□ -1.13
VPS4B-202ENST00000588059 ERHP84090 104 aaKnown RBP7.98□□□□□ -1.13
VPS4B-202ENST00000588059 PRCDQ00LT1 54 aa7.98□□□□□ -1.13
VPS4B-202ENST00000588059 Q56UQ5 140 aa7.98□□□□□ -1.13
VPS4B-202ENST00000588059 LEMD1Q68G75 181 aa7.98□□□□□ -1.13
VPS4B-202ENST00000588059 SLC35G3Q8N808 338 aa7.98□□□□□ -1.13
VPS4B-202ENST00000588059 NAA60Q9H7X0 242 aa7.98□□□□□ -1.13
VPS4B-202ENST00000588059 GPR132Q9UNW8 380 aa7.98□□□□□ -1.13
VPS4B-202ENST00000588059 IGHV3OR16-13A0A075B7E8 117 aa7.97□□□□□ -1.13
VPS4B-202ENST00000588059 IGHV3-74A0A0B4J1X5 117 aa7.97□□□□□ -1.13
VPS4B-202ENST00000588059 A0A0B4J293 547 aa7.97□□□□□ -1.13
VPS4B-202ENST00000588059 CRYM-AS1A6NIL9 109 aa7.97□□□□□ -1.13
VPS4B-202ENST00000588059 ZNF705EA8MWA4 302 aaPredicted RBP7.97□□□□□ -1.13
VPS4B-202ENST00000588059 ST8SIA3O43173 380 aa7.97□□□□□ -1.13
VPS4B-202ENST00000588059 CTSGP08311 255 aa7.97□□□□□ -1.13
VPS4B-202ENST00000588059 FAUP35544 74 aaKnown RBP7.97□□□□□ -1.13
VPS4B-202ENST00000588059 SNCAP37840 140 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms