RNA–Protein interactions for RNA: ENST00000587062.1

VAT1-203, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-203ENST00000587062 ETFRF1Q6IPR1 90 aa15.24■□□□□ 0.03
VAT1-203ENST00000587062 Q6ZRM9 215 aa15.24■□□□□ 0.03
VAT1-203ENST00000587062 SRD5A3Q9H8P0 318 aa15.24■□□□□ 0.03
VAT1-203ENST00000587062 DUXBA0A1W2PPF3 345 aa15.23■□□□□ 0.03
VAT1-203ENST00000587062 OR4C46A6NHA9 309 aa15.23■□□□□ 0.03
VAT1-203ENST00000587062 TSPAN4O14817 238 aa15.23■□□□□ 0.03
VAT1-203ENST00000587062 IGHV3-48P01763 117 aa15.23■□□□□ 0.03
VAT1-203ENST00000587062 CMC4P56277 68 aaPredicted RBP15.23■□□□□ 0.03
VAT1-203ENST00000587062 SMCO1Q147U7 214 aa15.23■□□□□ 0.03
VAT1-203ENST00000587062 ZNF79Q15937 498 aa15.23■□□□□ 0.03
VAT1-203ENST00000587062 PVRIGQ6DKI7 326 aa15.23■□□□□ 0.03
VAT1-203ENST00000587062 ZNF600Q6ZNG1 722 aa15.23■□□□□ 0.03
VAT1-203ENST00000587062 DEFB125Q8N687 156 aa15.23■□□□□ 0.03
VAT1-203ENST00000587062 TMEM116Q8NCL8 245 aa15.23■□□□□ 0.03
VAT1-203ENST00000587062 TMEM230Q96A57 120 aa15.23■□□□□ 0.03
VAT1-203ENST00000587062 SMPXQ9UHP9 88 aa15.23■□□□□ 0.03
VAT1-203ENST00000587062 NAP1L6A6NFF2 107 aa15.22■□□□□ 0.03
VAT1-203ENST00000587062 CENPXA8MT69 81 aa15.22■□□□□ 0.03
VAT1-203ENST00000587062 C3orf84H3BNL1 204 aa15.22■□□□□ 0.03
VAT1-203ENST00000587062 TMEM50AO95807 157 aa15.22■□□□□ 0.03
VAT1-203ENST00000587062 VAMP1P23763 118 aa15.22■□□□□ 0.03
VAT1-203ENST00000587062 PAFAH1B2P68402 229 aa15.22■□□□□ 0.03
VAT1-203ENST00000587062 RNASEH2CQ8TDP1 164 aaKnown RBP15.22■□□□□ 0.03
VAT1-203ENST00000587062 OR10C1Q96KK4 312 aa15.22■□□□□ 0.03
VAT1-203ENST00000587062 TMEM231Q9H6L2 316 aa15.22■□□□□ 0.03
VAT1-203ENST00000587062 IGHV7-4-1A0A0J9YVY3 117 aa15.21■□□□□ 0.03
VAT1-203ENST00000587062 A0A1B0GU03 582 aa15.21■□□□□ 0.03
VAT1-203ENST00000587062 ZNF207O43670 478 aaKnown RBP15.21■□□□□ 0.03
VAT1-203ENST00000587062 CLN5O75503 358 aa15.21■□□□□ 0.03
VAT1-203ENST00000587062 SLC25A4P12235 298 aa15.21■□□□□ 0.03
VAT1-203ENST00000587062 RBMS2Q15434 407 aaKnown RBP15.21■□□□□ 0.03
VAT1-203ENST00000587062 BSXQ3C1V8 233 aa15.21■□□□□ 0.03
VAT1-203ENST00000587062 C2orf83Q53S99 150 aa15.21■□□□□ 0.03
VAT1-203ENST00000587062 SLC24A4Q8NFF2 622 aa15.21■□□□□ 0.03
VAT1-203ENST00000587062 OR4X1Q8NH49 305 aa15.21■□□□□ 0.03
VAT1-203ENST00000587062 OR1S1Q8NH92 325 aa15.21■□□□□ 0.03
VAT1-203ENST00000587062 NARS2Q96I59 477 aaKnown RBP15.21■□□□□ 0.03
VAT1-203ENST00000587062 RHPN1-AS1Q9BWJ2 59 aa15.21■□□□□ 0.03
VAT1-203ENST00000587062 SELENOKQ9Y6D0 94 aa15.21■□□□□ 0.03
VAT1-203ENST00000587062 IGHV3OR16-8A0A075B7F1 116 aa15.2■□□□□ 0.02
VAT1-203ENST00000587062 IFNA10P01566 189 aa15.2■□□□□ 0.02
VAT1-203ENST00000587062 ATP5IP56385 69 aaPredicted RBP15.2■□□□□ 0.02
VAT1-203ENST00000587062 SUPT4H1P63272 117 aaKnown RBP15.2■□□□□ 0.02
VAT1-203ENST00000587062 LYZL2Q7Z4W2 148 aa15.2■□□□□ 0.02
VAT1-203ENST00000587062 CENPSQ8N2Z9 138 aa15.2■□□□□ 0.02
VAT1-203ENST00000587062 U3KQ87 197 aa15.2■□□□□ 0.02
VAT1-203ENST00000587062 COL7A1Q02388 2944 aa15.19■□□□□ 0.02
VAT1-203ENST00000587062 A0A1W2PS18 150 aa15.19■□□□□ 0.02
VAT1-203ENST00000587062 NPY1RP25929 384 aa15.19■□□□□ 0.02
VAT1-203ENST00000587062 TNFRSF9Q07011 255 aa15.19■□□□□ 0.02
VAT1-203ENST00000587062 CITED4Q96RK1 184 aa15.19■□□□□ 0.02
VAT1-203ENST00000587062 SRRQ9GZT4 340 aa15.19■□□□□ 0.02
VAT1-203ENST00000587062 PUS1Q9Y606 427 aaKnown RBP eCLIP15.19■□□□□ 0.02
VAT1-203ENST00000587062 LOC102724200A0A096LPH7 203 aaPredicted RBP15.18■□□□□ 0.02
VAT1-203ENST00000587062 CHEK1O14757 476 aa15.18■□□□□ 0.02
VAT1-203ENST00000587062 NPPCP23582 126 aa15.18■□□□□ 0.02
VAT1-203ENST00000587062 UBE2MP61081 183 aaKnown RBP15.18■□□□□ 0.02
VAT1-203ENST00000587062 NMSQ5H8A3 153 aa15.18■□□□□ 0.02
VAT1-203ENST00000587062 TOMM20LQ6UXN7 152 aa15.18■□□□□ 0.02
VAT1-203ENST00000587062 LINC00322Q6ZN03 302 aaPredicted RBP15.18■□□□□ 0.02
VAT1-203ENST00000587062 DTD1Q8TEA8 209 aa15.18■□□□□ 0.02
VAT1-203ENST00000587062 HSPB7Q9UBY9 170 aa15.18■□□□□ 0.02
VAT1-203ENST00000587062 MUC7Q8TAX7 377 aa15.17■□□□□ 0.02
VAT1-203ENST00000587062 METTL26Q96S19 204 aa15.17■□□□□ 0.02
VAT1-203ENST00000587062 FAM110AQ9BQ89 295 aa15.17■□□□□ 0.02
VAT1-203ENST00000587062 C7orf50Q9BRJ6 194 aaKnown RBP15.17■□□□□ 0.02
VAT1-203ENST00000587062 GGTLC1Q9BX51 225 aa15.17■□□□□ 0.02
VAT1-203ENST00000587062 PRR13Q9NZ81 148 aa15.17■□□□□ 0.02
VAT1-203ENST00000587062 TMED3Q9Y3Q3 217 aa15.17■□□□□ 0.02
VAT1-203ENST00000587062 MED6O75586 246 aa15.16■□□□□ 0.02
VAT1-203ENST00000587062 NXPH3O95157 252 aa15.16■□□□□ 0.02
VAT1-203ENST00000587062 SFT2D2O95562 160 aa15.16■□□□□ 0.02
VAT1-203ENST00000587062 SLC25A6P12236 298 aa15.16■□□□□ 0.02
VAT1-203ENST00000587062 CNPY1Q3B7I2 92 aa15.16■□□□□ 0.02
VAT1-203ENST00000587062 LRTM2Q8N967 370 aa15.16■□□□□ 0.02
VAT1-203ENST00000587062 OR1S2Q8NGQ3 325 aa15.16■□□□□ 0.02
VAT1-203ENST00000587062 Q8WTZ3 238 aa15.16■□□□□ 0.02
VAT1-203ENST00000587062 RNF2Q99496 336 aa15.16■□□□□ 0.02
VAT1-203ENST00000587062 WFDC10AQ9H1F0 79 aa15.16■□□□□ 0.02
VAT1-203ENST00000587062 FNDC4Q9H6D8 234 aaPredicted RBP15.16■□□□□ 0.02
VAT1-203ENST00000587062 RBMY1BA6NDE4 496 aaKnown RBP15.15■□□□□ 0.02
VAT1-203ENST00000587062 RBMY1EA6NEQ0 496 aaKnown RBP15.15■□□□□ 0.02
VAT1-203ENST00000587062 IFNA4P05014 189 aa15.15■□□□□ 0.02
VAT1-203ENST00000587062 RBMY1DP0C7P1 496 aaKnown RBP15.15■□□□□ 0.02
VAT1-203ENST00000587062 APOC4P55056 127 aa15.15■□□□□ 0.02
VAT1-203ENST00000587062 RPP30P78346 268 aaKnown RBP15.15■□□□□ 0.02
VAT1-203ENST00000587062 GRAMD2BQ96HH9 432 aa15.15■□□□□ 0.02
VAT1-203ENST00000587062 RBKSQ9H477 322 aa15.15■□□□□ 0.02
VAT1-203ENST00000587062 FAM90A26D6RGX4 464 aa15.14■□□□□ 0.01
VAT1-203ENST00000587062 DNASE2O00115 360 aaPredicted RBP15.14■□□□□ 0.01
VAT1-203ENST00000587062 LYL1P12980 280 aa15.14■□□□□ 0.01
VAT1-203ENST00000587062 EIF2B2P49770 351 aaKnown RBP15.14■□□□□ 0.01
VAT1-203ENST00000587062 RAB11AP62491 216 aa15.14■□□□□ 0.01
VAT1-203ENST00000587062 RPL11P62913 178 aaKnown RBP15.14■□□□□ 0.01
VAT1-203ENST00000587062 MLANAQ16655 118 aa15.14■□□□□ 0.01
VAT1-203ENST00000587062 IL17DQ8TAD2 202 aa15.14■□□□□ 0.01
VAT1-203ENST00000587062 CIB3Q96Q77 187 aaPredicted RBP15.14■□□□□ 0.01
VAT1-203ENST00000587062 IGHV3-49A0A0A0MS15 119 aa15.13■□□□□ 0.01
VAT1-203ENST00000587062 OR10J1P30954 320 aa15.13■□□□□ 0.01
VAT1-203ENST00000587062 RND2P52198 227 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms