RNA–Protein interactions for RNA: ENST00000586435.1

LIG3-209, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-209ENST00000586435 IGHV3-66A0A0C4DH42 116 aa8.61□□□□□ -1.03
LIG3-209ENST00000586435 IGLL5B9A064 214 aa8.61□□□□□ -1.03
LIG3-209ENST00000586435 RBMY1A1P0DJD3 496 aaKnown RBP8.61□□□□□ -1.03
LIG3-209ENST00000586435 RBMY1CP0DJD4 496 aa8.61□□□□□ -1.03
LIG3-209ENST00000586435 RPL5P46777 297 aaKnown RBP8.61□□□□□ -1.03
LIG3-209ENST00000586435 AKR1C2P52895 323 aa8.61□□□□□ -1.03
LIG3-209ENST00000586435 LSM3P62310 102 aaKnown RBP8.61□□□□□ -1.03
LIG3-209ENST00000586435 RBMY1FQ15415 496 aaKnown RBP8.61□□□□□ -1.03
LIG3-209ENST00000586435 BSXQ3C1V8 233 aa8.61□□□□□ -1.03
LIG3-209ENST00000586435 SPINK9Q5DT21 86 aa8.61□□□□□ -1.03
LIG3-209ENST00000586435 SNX29P2Q8IUI4 249 aa8.61□□□□□ -1.03
LIG3-209ENST00000586435 ARRDC1Q8N5I2 433 aa8.61□□□□□ -1.03
LIG3-209ENST00000586435 OR4X1Q8NH49 305 aa8.61□□□□□ -1.03
LIG3-209ENST00000586435 DCANP1Q8TF63 244 aa8.61□□□□□ -1.03
LIG3-209ENST00000586435 PDCD10Q9BUL8 212 aa8.61□□□□□ -1.03
LIG3-209ENST00000586435 FNDC4Q9H6D8 234 aaPredicted RBP8.61□□□□□ -1.03
LIG3-209ENST00000586435 TRAV10A0A0B4J240 114 aa8.6□□□□□ -1.03
LIG3-209ENST00000586435 IFNA17P01571 189 aa8.6□□□□□ -1.03
LIG3-209ENST00000586435 C4BPBP20851 252 aa8.6□□□□□ -1.03
LIG3-209ENST00000586435 HLA-DMBP28068 263 aa8.6□□□□□ -1.03
LIG3-209ENST00000586435 OPRK1P41145 380 aa8.6□□□□□ -1.03
LIG3-209ENST00000586435 P2RY1P47900 373 aa8.6□□□□□ -1.03
LIG3-209ENST00000586435 PIGPP57054 158 aa8.6□□□□□ -1.03
LIG3-209ENST00000586435 STXBP6Q8NFX7 210 aa8.6□□□□□ -1.03
LIG3-209ENST00000586435 NARS2Q96I59 477 aaKnown RBP8.6□□□□□ -1.03
LIG3-209ENST00000586435 TP53RKQ96S44 253 aa8.6□□□□□ -1.03
LIG3-209ENST00000586435 VCX3AQ9NNX9 186 aa8.6□□□□□ -1.03
LIG3-209ENST00000586435 MRPL36Q9P0J6 103 aaKnown RBP8.6□□□□□ -1.03
LIG3-209ENST00000586435 COMMD3Q9UBI1 195 aa8.6□□□□□ -1.03
LIG3-209ENST00000586435 X6R8D5 127 aa8.6□□□□□ -1.03
LIG3-209ENST00000586435 IGHV4-4A0A075B6R2 117 aa8.59□□□□□ -1.03
LIG3-209ENST00000586435 TRAV30A0A087WSZ9 112 aa8.59□□□□□ -1.03
LIG3-209ENST00000586435 C3orf85A0A1B0GTC6 90 aa8.59□□□□□ -1.03
LIG3-209ENST00000586435 M0QYG6 137 aa8.59□□□□□ -1.03
LIG3-209ENST00000586435 B3GALNT1O75752 331 aa8.59□□□□□ -1.03
LIG3-209ENST00000586435 IGKV1-17P01599 117 aa8.59□□□□□ -1.03
LIG3-209ENST00000586435 ZNF688P0C7X2 276 aa8.59□□□□□ -1.03
LIG3-209ENST00000586435 PGAM2P15259 253 aa8.59□□□□□ -1.03
LIG3-209ENST00000586435 TBPP20226 339 aa8.59□□□□□ -1.03
LIG3-209ENST00000586435 UCP1P25874 307 aa8.59□□□□□ -1.03
LIG3-209ENST00000586435 HOXA1P49639 335 aaPredicted RBP8.59□□□□□ -1.03
LIG3-209ENST00000586435 EIF2B2P49770 351 aaKnown RBP8.59□□□□□ -1.03
LIG3-209ENST00000586435 AARDQ4LEZ3 155 aa8.59□□□□□ -1.03
LIG3-209ENST00000586435 RNASE10Q5GAN6 216 aaKnown RBP8.59□□□□□ -1.03
LIG3-209ENST00000586435 Q6ZTC4 211 aa8.59□□□□□ -1.03
LIG3-209ENST00000586435 LINC00336Q6ZUF6 198 aa8.59□□□□□ -1.03
LIG3-209ENST00000586435 CSNK1G2-AS1Q8NCQ2 148 aa8.59□□□□□ -1.03
LIG3-209ENST00000586435 RNF126Q9BV68 326 aa8.59□□□□□ -1.03
LIG3-209ENST00000586435 ENY2Q9NPA8 101 aa8.59□□□□□ -1.03
LIG3-209ENST00000586435 U3KQE9 123 aa8.59□□□□□ -1.03
LIG3-209ENST00000586435 ELOA3CA0A087WX78 387 aaPredicted RBP8.58□□□□□ -1.04
LIG3-209ENST00000586435 A0A087WXM4 84 aa8.58□□□□□ -1.04
LIG3-209ENST00000586435 HELTA6NFD8 242 aa8.58□□□□□ -1.04
LIG3-209ENST00000586435 AMBPP02760 352 aa8.58□□□□□ -1.04
LIG3-209ENST00000586435 ELK1P19419 428 aa8.58□□□□□ -1.04
LIG3-209ENST00000586435 PI3P19957 117 aa8.58□□□□□ -1.04
LIG3-209ENST00000586435 ETV6P41212 452 aa8.58□□□□□ -1.04
LIG3-209ENST00000586435 PPP5CP53041 499 aa8.58□□□□□ -1.04
LIG3-209ENST00000586435 FAM219AQ8IW50 185 aa8.58□□□□□ -1.04
LIG3-209ENST00000586435 CCDC71LQ8N9Z2 235 aa8.58□□□□□ -1.04
LIG3-209ENST00000586435 OR52E5Q8NH55 327 aa8.58□□□□□ -1.04
LIG3-209ENST00000586435 TMEM230Q96A57 120 aa8.58□□□□□ -1.04
LIG3-209ENST00000586435 TBC1D24Q9ULP9 559 aa8.58□□□□□ -1.04
LIG3-209ENST00000586435 A0A0G2JRQ6 117 aa8.57□□□□□ -1.04
LIG3-209ENST00000586435 RPS10-NUDT3A0A1W2PQS6 291 aa8.57□□□□□ -1.04
LIG3-209ENST00000586435 KNCNA6PVL3 124 aa8.57□□□□□ -1.04
LIG3-209ENST00000586435 HPGDSO60760 199 aa8.57□□□□□ -1.04
LIG3-209ENST00000586435 IGLC1P0CG04 106 aa8.57□□□□□ -1.04
LIG3-209ENST00000586435 AP2S1P53680 142 aaPredicted RBP8.57□□□□□ -1.04
LIG3-209ENST00000586435 SPCS3P61009 180 aa8.57□□□□□ -1.04
LIG3-209ENST00000586435 NCS1P62166 190 aa8.57□□□□□ -1.04
LIG3-209ENST00000586435 MLANAQ16655 118 aa8.57□□□□□ -1.04
LIG3-209ENST00000586435 TRIM16LQ309B1 348 aa8.57□□□□□ -1.04
LIG3-209ENST00000586435 TIGITQ495A1 244 aa8.57□□□□□ -1.04
LIG3-209ENST00000586435 ACTL10Q5JWF8 245 aa8.57□□□□□ -1.04
LIG3-209ENST00000586435 CENPSQ8N2Z9 138 aa8.57□□□□□ -1.04
LIG3-209ENST00000586435 OR1S2Q8NGQ3 325 aa8.57□□□□□ -1.04
LIG3-209ENST00000586435 ZFAND1Q8TCF1 268 aa8.57□□□□□ -1.04
LIG3-209ENST00000586435 GLMPQ8WWB7 406 aa8.57□□□□□ -1.04
LIG3-209ENST00000586435 RRNAD1Q96FB5 475 aaKnown RBP8.57□□□□□ -1.04
LIG3-209ENST00000586435 SEPSECSQ9HD40 501 aaKnown RBP8.57□□□□□ -1.04
LIG3-209ENST00000586435 COPZ2Q9P299 210 aa8.57□□□□□ -1.04
LIG3-209ENST00000586435 KLK11Q9UBX7 282 aa8.57□□□□□ -1.04
LIG3-209ENST00000586435 MTFP1Q9UDX5 166 aa8.57□□□□□ -1.04
LIG3-209ENST00000586435 TNFAIP8O95379 198 aa8.56□□□□□ -1.04
LIG3-209ENST00000586435 CD3DP04234 171 aa8.56□□□□□ -1.04
LIG3-209ENST00000586435 HNRNPCP07910 306 aaKnown RBP eCLIP8.56□□□□□ -1.04
LIG3-209ENST00000586435 SLC25A4P12235 298 aa8.56□□□□□ -1.04
LIG3-209ENST00000586435 HTR2BP41595 481 aa8.56□□□□□ -1.04
LIG3-209ENST00000586435 YPEL3P61236 119 aaPredicted RBP8.56□□□□□ -1.04
LIG3-209ENST00000586435 DHRS2Q13268 280 aa8.56□□□□□ -1.04
LIG3-209ENST00000586435 C2orf83Q53S99 150 aa8.56□□□□□ -1.04
LIG3-209ENST00000586435 C16orf54Q6UWD8 224 aa8.56□□□□□ -1.04
LIG3-209ENST00000586435 FUNDC2Q9BWH2 189 aa8.56□□□□□ -1.04
LIG3-209ENST00000586435 C1QTNF4Q9BXJ3 329 aa8.56□□□□□ -1.04
LIG3-209ENST00000586435 KIAA1109Q2LD37 5005 aa8.56□□□□□ -1.04
LIG3-209ENST00000586435 A0A1B0GVY2 172 aa8.55□□□□□ -1.04
LIG3-209ENST00000586435 CDS2O95674 445 aa8.55□□□□□ -1.04
LIG3-209ENST00000586435 CD74P04233 296 aa8.55□□□□□ -1.04
LIG3-209ENST00000586435 RORCP51449 518 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms