RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 PRR20EP86478 221 aa8.56□□□□□ -1.04
LIG3-207ENST00000586119 PRR20CP86479 221 aa8.56□□□□□ -1.04
LIG3-207ENST00000586119 PRR20DP86480 221 aa8.56□□□□□ -1.04
LIG3-207ENST00000586119 PRR20BP86481 221 aa8.56□□□□□ -1.04
LIG3-207ENST00000586119 PRR20AP86496 221 aa8.56□□□□□ -1.04
LIG3-207ENST00000586119 STPG3Q8N7X2 389 aa8.56□□□□□ -1.04
LIG3-207ENST00000586119 ZBTB8BQ8NAP8 495 aaPredicted RBP8.56□□□□□ -1.04
LIG3-207ENST00000586119 DUSP18Q8NEJ0 188 aa8.56□□□□□ -1.04
LIG3-207ENST00000586119 ENKURQ8TC29 256 aa8.56□□□□□ -1.04
LIG3-207ENST00000586119 SCARB1Q8WTV0 552 aa8.56□□□□□ -1.04
LIG3-207ENST00000586119 TMEM230Q96A57 120 aa8.56□□□□□ -1.04
LIG3-207ENST00000586119 COMMD5Q9GZQ3 224 aa8.56□□□□□ -1.04
LIG3-207ENST00000586119 MAP6D1Q9H9H5 199 aa8.56□□□□□ -1.04
LIG3-207ENST00000586119 PAIP2BQ9ULR5 123 aaKnown RBP8.56□□□□□ -1.04
LIG3-207ENST00000586119 HECTD4Q9Y4D8 3996 aa8.55□□□□□ -1.04
LIG3-207ENST00000586119 hCG_2014768A0A024R1R8 64 aa8.55□□□□□ -1.04
LIG3-207ENST00000586119 IGKV3-7A0A075B6H7 116 aa8.55□□□□□ -1.04
LIG3-207ENST00000586119 TRAPPC2P0DI81 140 aa8.55□□□□□ -1.04
LIG3-207ENST00000586119 TRAPPC2BP0DI82 140 aa8.55□□□□□ -1.04
LIG3-207ENST00000586119 AKR1C4P17516 323 aa8.55□□□□□ -1.04
LIG3-207ENST00000586119 TFPI2P48307 235 aa8.55□□□□□ -1.04
LIG3-207ENST00000586119 BCAP31P51572 246 aa8.55□□□□□ -1.04
LIG3-207ENST00000586119 NANOS2P60321 138 aaKnown RBP8.55□□□□□ -1.04
LIG3-207ENST00000586119 ERVK-16P61578 105 aa8.55□□□□□ -1.04
LIG3-207ENST00000586119 SRPXP78539 464 aa8.55□□□□□ -1.04
LIG3-207ENST00000586119 TMED4Q7Z7H5 227 aa8.55□□□□□ -1.04
LIG3-207ENST00000586119 UBAC2Q8NBM4 344 aa8.55□□□□□ -1.04
LIG3-207ENST00000586119 DMBX1Q8NFW5 382 aa8.55□□□□□ -1.04
LIG3-207ENST00000586119 VN1R17PQ8TDU5 208 aa8.55□□□□□ -1.04
LIG3-207ENST00000586119 IL22RA2Q969J5 263 aa8.55□□□□□ -1.04
LIG3-207ENST00000586119 TP53RKQ96S44 253 aa8.55□□□□□ -1.04
LIG3-207ENST00000586119 RNF2Q99496 336 aa8.55□□□□□ -1.04
LIG3-207ENST00000586119 HINT2Q9BX68 163 aa8.55□□□□□ -1.04
LIG3-207ENST00000586119 QTRT1Q9BXR0 403 aaKnown RBP8.55□□□□□ -1.04
LIG3-207ENST00000586119 TMEM222Q9H0R3 208 aa8.55□□□□□ -1.04
LIG3-207ENST00000586119 C20orf85Q9H1P6 137 aa8.55□□□□□ -1.04
LIG3-207ENST00000586119 KLK5Q9Y337 293 aaPredicted RBP8.55□□□□□ -1.04
LIG3-207ENST00000586119 IGHV3OR16-13A0A075B7E8 117 aa8.54□□□□□ -1.04
LIG3-207ENST00000586119 IGHV3-74A0A0B4J1X5 117 aa8.54□□□□□ -1.04
LIG3-207ENST00000586119 KIR2DL5BA0A0G2JN68 375 aa8.54□□□□□ -1.04
LIG3-207ENST00000586119 KIR2DL5BA0A0G2JPC4 375 aa8.54□□□□□ -1.04
LIG3-207ENST00000586119 DBX1A6NMT0 343 aa8.54□□□□□ -1.04
LIG3-207ENST00000586119 K7EIM0 57 aa8.54□□□□□ -1.04
LIG3-207ENST00000586119 UBE2CO00762 179 aa8.54□□□□□ -1.04
LIG3-207ENST00000586119 DEFB4AO15263 64 aa8.54□□□□□ -1.04
LIG3-207ENST00000586119 SFT2D2O95562 160 aa8.54□□□□□ -1.04
LIG3-207ENST00000586119 CDS2O95674 445 aa8.54□□□□□ -1.04
LIG3-207ENST00000586119 OR5AC1P0C628 307 aa8.54□□□□□ -1.04
LIG3-207ENST00000586119 TRIM16LQ309B1 348 aa8.54□□□□□ -1.04
LIG3-207ENST00000586119 KIR2DL5AQ8N109 375 aa8.54□□□□□ -1.04
LIG3-207ENST00000586119 KIR2DL5BQ8NHK3 375 aa8.54□□□□□ -1.04
LIG3-207ENST00000586119 GLYATL2Q8WU03 294 aa8.54□□□□□ -1.04
LIG3-207ENST00000586119 TMEM56Q96MV1 263 aa8.54□□□□□ -1.04
LIG3-207ENST00000586119 DAZ1Q9NQZ3 744 aaKnown RBP8.54□□□□□ -1.04
LIG3-207ENST00000586119 NDUFA4L2Q9NRX3 87 aa8.54□□□□□ -1.04
LIG3-207ENST00000586119 THYN1Q9P016 225 aa8.54□□□□□ -1.04
LIG3-207ENST00000586119 TMEM56-RWDD3S4R434 201 aa8.54□□□□□ -1.04
LIG3-207ENST00000586119 PCLOQ9Y6V0 5065 aa8.54□□□□□ -1.04
LIG3-207ENST00000586119 DUXBA0A1W2PPF3 345 aa8.53□□□□□ -1.04
LIG3-207ENST00000586119 MARCH11A6NNE9 402 aa8.53□□□□□ -1.04
LIG3-207ENST00000586119 NDUFA4O00483 81 aa8.53□□□□□ -1.04
LIG3-207ENST00000586119 CHEK1O14757 476 aa8.53□□□□□ -1.04
LIG3-207ENST00000586119 PTTG1O95997 202 aa8.53□□□□□ -1.04
LIG3-207ENST00000586119 IGHV3-48P01763 117 aa8.53□□□□□ -1.04
LIG3-207ENST00000586119 CTSGP08311 255 aa8.53□□□□□ -1.04
LIG3-207ENST00000586119 H2AFB2P0C5Z0 115 aa8.53□□□□□ -1.04
LIG3-207ENST00000586119 OR4E1P0C645 316 aa8.53□□□□□ -1.04
LIG3-207ENST00000586119 G6PCP35575 357 aa8.53□□□□□ -1.04
LIG3-207ENST00000586119 SUPT4H1P63272 117 aaKnown RBP8.53□□□□□ -1.04
LIG3-207ENST00000586119 TMEM187Q14656 261 aa8.53□□□□□ -1.04
LIG3-207ENST00000586119 OXA1LQ15070 435 aa8.53□□□□□ -1.04
LIG3-207ENST00000586119 SP6Q3SY56 376 aa8.53□□□□□ -1.04
LIG3-207ENST00000586119 LGALS9CQ6DKI2 356 aa8.53□□□□□ -1.04
LIG3-207ENST00000586119 LAMTOR1Q6IAA8 161 aa8.53□□□□□ -1.04
LIG3-207ENST00000586119 FAM219AQ8IW50 185 aa8.53□□□□□ -1.04
LIG3-207ENST00000586119 LGI3Q8N145 548 aa8.53□□□□□ -1.04
LIG3-207ENST00000586119 LILRB2Q8N423 598 aa8.53□□□□□ -1.04
LIG3-207ENST00000586119 GBGT1Q8N5D6 347 aa8.53□□□□□ -1.04
LIG3-207ENST00000586119 LRTM2Q8N967 370 aa8.53□□□□□ -1.04
LIG3-207ENST00000586119 OR1L8Q8NGR8 309 aa8.53□□□□□ -1.04
LIG3-207ENST00000586119 RBPMSQ93062 196 aaKnown RBP8.53□□□□□ -1.04
LIG3-207ENST00000586119 BSCL2Q96G97 398 aaPredicted RBP8.53□□□□□ -1.04
LIG3-207ENST00000586119 NUDT15Q9NV35 164 aa8.53□□□□□ -1.04
LIG3-207ENST00000586119 C21orf62Q9NYP8 219 aa8.53□□□□□ -1.04
LIG3-207ENST00000586119 FBXL17Q9UF56 701 aa8.53□□□□□ -1.04
LIG3-207ENST00000586119 SMPXQ9UHP9 88 aa8.53□□□□□ -1.04
LIG3-207ENST00000586119 FLVCR2Q9UPI3 526 aa8.53□□□□□ -1.04
LIG3-207ENST00000586119 F11RQ9Y624 299 aaKnown RBP8.53□□□□□ -1.04
LIG3-207ENST00000586119 K7EMT4 169 aa8.52□□□□□ -1.05
LIG3-207ENST00000586119 KRASP01116 189 aa8.52□□□□□ -1.05
LIG3-207ENST00000586119 IGKV1-39P01597 117 aa8.52□□□□□ -1.05
LIG3-207ENST00000586119 IGKV1D-39P04432 117 aa8.52□□□□□ -1.05
LIG3-207ENST00000586119 IL5P05113 134 aa8.52□□□□□ -1.05
LIG3-207ENST00000586119 ATF4P18848 351 aaPredicted RBP8.52□□□□□ -1.05
LIG3-207ENST00000586119 VAMP1P23763 118 aa8.52□□□□□ -1.05
LIG3-207ENST00000586119 PPP1R1AQ13522 171 aa8.52□□□□□ -1.05
LIG3-207ENST00000586119 Q56UQ5 140 aa8.52□□□□□ -1.05
LIG3-207ENST00000586119 H2BFWTQ7Z2G1 175 aa8.52□□□□□ -1.05
LIG3-207ENST00000586119 NRARPQ7Z6K4 114 aa8.52□□□□□ -1.05
LIG3-207ENST00000586119 SELENOHQ8IZQ5 122 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms