RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 SH2D7A6NKC9 451 aaPredicted RBP10.08□□□□□ -0.8
SMARCA4-208ENST00000585799 HYPMO75409 117 aa10.08□□□□□ -0.8
SMARCA4-208ENST00000585799 CGB3P0DN86 165 aa10.08□□□□□ -0.8
SMARCA4-208ENST00000585799 CGB7P0DN87 165 aa10.08□□□□□ -0.8
SMARCA4-208ENST00000585799 LINC00305Q7Z4B0 112 aa10.08□□□□□ -0.8
SMARCA4-208ENST00000585799 DMRTC2Q8IXT2 367 aaPredicted RBP10.08□□□□□ -0.8
SMARCA4-208ENST00000585799 PERPQ96FX8 193 aa10.08□□□□□ -0.8
SMARCA4-208ENST00000585799 MS4A10Q96PG2 267 aa10.08□□□□□ -0.8
SMARCA4-208ENST00000585799 ADGRG4Q8IZF6 3080 aa10.08□□□□□ -0.8
SMARCA4-208ENST00000585799 PGPA6NDG6 321 aa10.08□□□□□ -0.8
SMARCA4-208ENST00000585799 FAM90A9PA6NNJ1 464 aa10.08□□□□□ -0.8
SMARCA4-208ENST00000585799 FCN1O00602 326 aa10.08□□□□□ -0.8
SMARCA4-208ENST00000585799 SAMD10Q9BYL1 202 aa10.08□□□□□ -0.8
SMARCA4-208ENST00000585799 A0A1W2PPI3 338 aa10.08□□□□□ -0.8
SMARCA4-208ENST00000585799 ZNF705FA8MVS1 300 aaPredicted RBP10.08□□□□□ -0.8
SMARCA4-208ENST00000585799 BUB1B-PAK6H3BSN5 160 aa10.08□□□□□ -0.8
SMARCA4-208ENST00000585799 ZNF705DP0CH99 300 aaPredicted RBP10.08□□□□□ -0.8
SMARCA4-208ENST00000585799 ZNF705BP0CI00 300 aaPredicted RBP10.08□□□□□ -0.8
SMARCA4-208ENST00000585799 LY6EQ16553 131 aa10.08□□□□□ -0.8
SMARCA4-208ENST00000585799 WNT10AQ9GZT5 417 aa10.08□□□□□ -0.8
SMARCA4-208ENST00000585799 GAR1Q9NY12 217 aaKnown RBP10.08□□□□□ -0.8
SMARCA4-208ENST00000585799 XKRY2A2RUG3 117 aa10.07□□□□□ -0.8
SMARCA4-208ENST00000585799 WT1-ASQ06250 92 aa10.07□□□□□ -0.8
SMARCA4-208ENST00000585799 PRSS8Q16651 343 aa10.07□□□□□ -0.8
SMARCA4-208ENST00000585799 C10orf91Q5T1B1 145 aa10.07□□□□□ -0.8
SMARCA4-208ENST00000585799 GPR61Q9BZJ8 451 aa10.07□□□□□ -0.8
SMARCA4-208ENST00000585799 CFAP47Q6ZTR5 3102 aa10.07□□□□□ -0.8
SMARCA4-208ENST00000585799 MYO9AB2RTY4 2548 aa10.07□□□□□ -0.8
SMARCA4-208ENST00000585799 SETD2Q9BYW2 2564 aaPredicted RBP10.07□□□□□ -0.8
SMARCA4-208ENST00000585799 E7EUB6 86 aa10.07□□□□□ -0.8
SMARCA4-208ENST00000585799 CTRB1P17538 263 aa10.07□□□□□ -0.8
SMARCA4-208ENST00000585799 ELOBQ15370 118 aa10.07□□□□□ -0.8
SMARCA4-208ENST00000585799 CTRB2Q6GPI1 263 aa10.07□□□□□ -0.8
SMARCA4-208ENST00000585799 ZNF833PQ6ZTB9 187 aa10.07□□□□□ -0.8
SMARCA4-208ENST00000585799 OR5AN1Q8NGI8 311 aa10.07□□□□□ -0.8
SMARCA4-208ENST00000585799 TMEM167AQ8TBQ9 72 aa10.07□□□□□ -0.8
SMARCA4-208ENST00000585799 DDB2Q92466 427 aa10.07□□□□□ -0.8
SMARCA4-208ENST00000585799 CTDSP1Q9GZU7 261 aa10.07□□□□□ -0.8
SMARCA4-208ENST00000585799 MAP1AP78559 2803 aaPredicted RBP10.07□□□□□ -0.8
SMARCA4-208ENST00000585799 PMS2P5A8MQ11 134 aa10.07□□□□□ -0.8
SMARCA4-208ENST00000585799 ITGB1BP1O14713 200 aa10.07□□□□□ -0.8
SMARCA4-208ENST00000585799 SCGB2A1O75556 95 aa10.07□□□□□ -0.8
SMARCA4-208ENST00000585799 TRGC1P0CF51 173 aa10.07□□□□□ -0.8
SMARCA4-208ENST00000585799 RPL29P47914 159 aaKnown RBP10.07□□□□□ -0.8
SMARCA4-208ENST00000585799 CAMPP49913 170 aa10.07□□□□□ -0.8
SMARCA4-208ENST00000585799 RPL11P62913 178 aaKnown RBP10.07□□□□□ -0.8
SMARCA4-208ENST00000585799 BPESC1Q9GZL8 116 aa10.07□□□□□ -0.8
SMARCA4-208ENST00000585799 ZNF98A6NK75 572 aa10.06□□□□□ -0.8
SMARCA4-208ENST00000585799 OR2J3O76001 311 aa10.06□□□□□ -0.8
SMARCA4-208ENST00000585799 STAG3L2P0CL84 134 aa10.06□□□□□ -0.8
SMARCA4-208ENST00000585799 STAG3L3P0CL85 134 aa10.06□□□□□ -0.8
SMARCA4-208ENST00000585799 IER3P46695 156 aa10.06□□□□□ -0.8
SMARCA4-208ENST00000585799 TMEM177Q53S58 311 aa10.06□□□□□ -0.8
SMARCA4-208ENST00000585799 CHODLQ9H9P2 273 aa10.06□□□□□ -0.8
SMARCA4-208ENST00000585799 LINC00527Q9UJ94 153 aa10.06□□□□□ -0.8
SMARCA4-208ENST00000585799 ZNF257Q9Y2Q1 563 aa10.06□□□□□ -0.8
SMARCA4-208ENST00000585799 ZNF462Q96JM2 2506 aa10.06□□□□□ -0.8
SMARCA4-208ENST00000585799 BRS3P32247 399 aa10.06□□□□□ -0.8
SMARCA4-208ENST00000585799 MEOX2P50222 304 aa10.06□□□□□ -0.8
SMARCA4-208ENST00000585799 CENPWQ5EE01 88 aa10.06□□□□□ -0.8
SMARCA4-208ENST00000585799 OR51M1Q9H341 326 aa10.06□□□□□ -0.8
SMARCA4-208ENST00000585799 YTHDF2Q9Y5A9 579 aaKnown RBP10.06□□□□□ -0.8
SMARCA4-208ENST00000585799 CENPEQ02224 2701 aa10.06□□□□□ -0.8
SMARCA4-208ENST00000585799 IGKV3-7A0A075B6H7 116 aa10.06□□□□□ -0.8
SMARCA4-208ENST00000585799 P0C879 139 aa10.06□□□□□ -0.8
SMARCA4-208ENST00000585799 AGAP20933 346 aa10.06□□□□□ -0.8
SMARCA4-208ENST00000585799 PRR31Q5SQ13 230 aa10.06□□□□□ -0.8
SMARCA4-208ENST00000585799 TCEAL7Q9BRU2 100 aa10.06□□□□□ -0.8
SMARCA4-208ENST00000585799 ZNF331Q9NQX6 463 aaPredicted RBP10.06□□□□□ -0.8
SMARCA4-208ENST00000585799 NAT8BQ9UHF3 227 aa10.06□□□□□ -0.8
SMARCA4-208ENST00000585799 COL27A1Q8IZC6 1860 aaPredicted RBP10.05□□□□□ -0.8
SMARCA4-208ENST00000585799 IGHV3-49A0A0A0MS15 119 aa10.05□□□□□ -0.8
SMARCA4-208ENST00000585799 FABP1P07148 127 aa10.05□□□□□ -0.8
SMARCA4-208ENST00000585799 FCGR2BP31994 310 aaPredicted RBP10.05□□□□□ -0.8
SMARCA4-208ENST00000585799 GNG5P63218 68 aa10.05□□□□□ -0.8
SMARCA4-208ENST00000585799 SSBP2P81877 361 aaPredicted RBP10.05□□□□□ -0.8
SMARCA4-208ENST00000585799 C2orf83Q53S99 150 aa10.05□□□□□ -0.8
SMARCA4-208ENST00000585799 ASPHD1Q5U4P2 390 aa10.05□□□□□ -0.8
SMARCA4-208ENST00000585799 CCDC144NLQ6NUI1 221 aa10.05□□□□□ -0.8
SMARCA4-208ENST00000585799 OR8I2Q8N0Y5 310 aa10.05□□□□□ -0.8
SMARCA4-208ENST00000585799 ANAPC16Q96DE5 110 aa10.05□□□□□ -0.8
SMARCA4-208ENST00000585799 SIGLEC9Q9Y336 463 aa10.05□□□□□ -0.8
SMARCA4-208ENST00000585799 SIAH2O43255 324 aa10.05□□□□□ -0.8
SMARCA4-208ENST00000585799 SELENOTP62341 195 aa10.05□□□□□ -0.8
SMARCA4-208ENST00000585799 EIF4EBP1Q13541 118 aaPredicted RBP10.05□□□□□ -0.8
SMARCA4-208ENST00000585799 UNQ5815/PRO19632Q6UWF5 114 aa10.05□□□□□ -0.8
SMARCA4-208ENST00000585799 OCC1Q8TAD7 63 aa10.05□□□□□ -0.8
SMARCA4-208ENST00000585799 JKAMPQ9P055 326 aa10.05□□□□□ -0.8
SMARCA4-208ENST00000585799 HIGD1AQ9Y241 93 aa10.05□□□□□ -0.8
SMARCA4-208ENST00000585799 A0A1B0GW64 132 aa10.05□□□□□ -0.8
SMARCA4-208ENST00000585799 SCGB1D1O95968 90 aa10.05□□□□□ -0.8
SMARCA4-208ENST00000585799 S100A12P80511 92 aa10.05□□□□□ -0.8
SMARCA4-208ENST00000585799 VMO1Q7Z5L0 202 aa10.05□□□□□ -0.8
SMARCA4-208ENST00000585799 GATCO43716 136 aaKnown RBP10.04□□□□□ -0.8
SMARCA4-208ENST00000585799 KIAA1644Q3SXP7 199 aa10.04□□□□□ -0.8
SMARCA4-208ENST00000585799 CLEC2AQ6UVW9 174 aa10.04□□□□□ -0.8
SMARCA4-208ENST00000585799 NCOR1P1Q9H4R4 102 aa10.04□□□□□ -0.8
SMARCA4-208ENST00000585799 NBR2O15453 112 aa10.04□□□□□ -0.8
SMARCA4-208ENST00000585799 IL4P05112 153 aa10.04□□□□□ -0.8
SMARCA4-208ENST00000585799 C1QL4Q86Z23 238 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms