RNA–Protein interactions for RNA: ENST00000585726.5

RETREG3-202, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 522 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-202ENST00000585726 NUPL2O15504 423 aaKnown RBP16.36■□□□□ 0.21
RETREG3-202ENST00000585726 PRAF2O60831 178 aa16.36■□□□□ 0.21
RETREG3-202ENST00000585726 IFNA4P05014 189 aa16.36■□□□□ 0.21
RETREG3-202ENST00000585726 INSL3P51460 131 aa16.36■□□□□ 0.21
RETREG3-202ENST00000585726 ID3Q02535 119 aa16.36■□□□□ 0.21
RETREG3-202ENST00000585726 SPSB3Q6PJ21 355 aa16.36■□□□□ 0.21
RETREG3-202ENST00000585726 RNASEH2CQ8TDP1 164 aaKnown RBP16.36■□□□□ 0.21
RETREG3-202ENST00000585726 TXN2Q99757 166 aa16.36■□□□□ 0.21
RETREG3-202ENST00000585726 GAR1Q9NY12 217 aaKnown RBP16.36■□□□□ 0.21
RETREG3-202ENST00000585726 MRPL36Q9P0J6 103 aaKnown RBP16.36■□□□□ 0.21
RETREG3-202ENST00000585726 RPS10-NUDT3A0A1W2PQS6 291 aa16.35■□□□□ 0.21
RETREG3-202ENST00000585726 SSSCA1O60232 199 aa16.35■□□□□ 0.21
RETREG3-202ENST00000585726 CSN3P07498 182 aa16.35■□□□□ 0.21
RETREG3-202ENST00000585726 CTSGP08311 255 aa16.35■□□□□ 0.21
RETREG3-202ENST00000585726 ADMP35318 185 aa16.35■□□□□ 0.21
RETREG3-202ENST00000585726 NPBWR1P48145 328 aa16.35■□□□□ 0.21
RETREG3-202ENST00000585726 UNQ9165/PRO28630Q6UXU0 137 aa16.35■□□□□ 0.21
RETREG3-202ENST00000585726 IL34Q6ZMJ4 242 aa16.35■□□□□ 0.21
RETREG3-202ENST00000585726 CIB3Q96Q77 187 aaPredicted RBP16.35■□□□□ 0.21
RETREG3-202ENST00000585726 ATP6V0BQ99437 205 aa16.35■□□□□ 0.21
RETREG3-202ENST00000585726 LGALS9O00182 355 aa16.34■□□□□ 0.21
RETREG3-202ENST00000585726 EDN2P20800 178 aa16.34■□□□□ 0.21
RETREG3-202ENST00000585726 EGFEM1PQ0D2K5 195 aa16.34■□□□□ 0.21
RETREG3-202ENST00000585726 SPANXN5Q5MJ07 72 aa16.34■□□□□ 0.21
RETREG3-202ENST00000585726 GSG1LQ6UXU4 331 aa16.34■□□□□ 0.21
RETREG3-202ENST00000585726 REC114Q7Z4M0 266 aa16.34■□□□□ 0.21
RETREG3-202ENST00000585726 NOTCH3Q9UM47 2321 aa16.33■□□□□ 0.2
RETREG3-202ENST00000585726 IGHV3OR16-8A0A075B7F1 116 aa16.33■□□□□ 0.2
RETREG3-202ENST00000585726 C15orf62A8K5M9 175 aa16.33■□□□□ 0.2
RETREG3-202ENST00000585726 SNRPGP15A8MWD9 76 aa16.33■□□□□ 0.2
RETREG3-202ENST00000585726 H3BP45 60 aa16.33■□□□□ 0.2
RETREG3-202ENST00000585726 WIPF1O43516 503 aa16.33■□□□□ 0.2
RETREG3-202ENST00000585726 FCGR2BP31994 310 aaPredicted RBP16.33■□□□□ 0.2
RETREG3-202ENST00000585726 RAB11AP62491 216 aa16.33■□□□□ 0.2
RETREG3-202ENST00000585726 RPP30P78346 268 aaKnown RBP16.33■□□□□ 0.2
RETREG3-202ENST00000585726 C20orf24Q9BUV8 137 aa16.33■□□□□ 0.2
RETREG3-202ENST00000585726 ZNF436Q9C0F3 470 aaPredicted RBP16.33■□□□□ 0.2
RETREG3-202ENST00000585726 AURKAIP1Q9NWT8 199 aaPredicted RBP16.33■□□□□ 0.2
RETREG3-202ENST00000585726 C2orf70A6NJV1 201 aa16.32■□□□□ 0.2
RETREG3-202ENST00000585726 YIF1AO95070 293 aa16.32■□□□□ 0.2
RETREG3-202ENST00000585726 TMEM50AO95807 157 aa16.32■□□□□ 0.2
RETREG3-202ENST00000585726 PTTG1O95997 202 aa16.32■□□□□ 0.2
RETREG3-202ENST00000585726 RELQ04864 619 aaPredicted RBP16.32■□□□□ 0.2
RETREG3-202ENST00000585726 TM4SF20Q53R12 229 aa16.32■□□□□ 0.2
RETREG3-202ENST00000585726 ETFRF1Q6IPR1 90 aa16.32■□□□□ 0.2
RETREG3-202ENST00000585726 OR4X1Q8NH49 305 aa16.32■□□□□ 0.2
RETREG3-202ENST00000585726 CACNG8Q8WXS5 425 aa16.32■□□□□ 0.2
RETREG3-202ENST00000585726 C2orf50Q96LR7 162 aa16.32■□□□□ 0.2
RETREG3-202ENST00000585726 PALMDQ9NP74 551 aa16.32■□□□□ 0.2
RETREG3-202ENST00000585726 PSENENQ9NZ42 101 aa16.32■□□□□ 0.2
RETREG3-202ENST00000585726 SELENOKQ9Y6D0 94 aa16.32■□□□□ 0.2
RETREG3-202ENST00000585726 GOSR2O14653 212 aa16.31■□□□□ 0.2
RETREG3-202ENST00000585726 CLN5O75503 358 aa16.31■□□□□ 0.2
RETREG3-202ENST00000585726 LY86O95711 162 aa16.31■□□□□ 0.2
RETREG3-202ENST00000585726 MBPP02686 304 aaPredicted RBP16.31■□□□□ 0.2
RETREG3-202ENST00000585726 SLC25A4P12235 298 aa16.31■□□□□ 0.2
RETREG3-202ENST00000585726 FOLR2P14207 255 aa16.31■□□□□ 0.2
RETREG3-202ENST00000585726 RND2P52198 227 aa16.31■□□□□ 0.2
RETREG3-202ENST00000585726 ATP5IP56385 69 aaPredicted RBP16.31■□□□□ 0.2
RETREG3-202ENST00000585726 PRSS54Q6PEW0 395 aa16.31■□□□□ 0.2
RETREG3-202ENST00000585726 SLC16A13Q7RTY0 426 aa16.31■□□□□ 0.2
RETREG3-202ENST00000585726 ACY3Q96HD9 319 aa16.31■□□□□ 0.2
RETREG3-202ENST00000585726 STRAPQ9Y3F4 350 aaKnown RBP16.31■□□□□ 0.2
RETREG3-202ENST00000585726 LSM5Q9Y4Y9 91 aaKnown RBP16.31■□□□□ 0.2
RETREG3-202ENST00000585726 NDUFA4O00483 81 aa16.3■□□□□ 0.2
RETREG3-202ENST00000585726 ZNF207O43670 478 aaKnown RBP16.3■□□□□ 0.2
RETREG3-202ENST00000585726 SSNA1O43805 119 aa16.3■□□□□ 0.2
RETREG3-202ENST00000585726 SIX6O95475 246 aa16.3■□□□□ 0.2
RETREG3-202ENST00000585726 CD69Q07108 199 aa16.3■□□□□ 0.2
RETREG3-202ENST00000585726 DCTN2Q13561 401 aaKnown RBP16.3■□□□□ 0.2
RETREG3-202ENST00000585726 ADAMTSL5Q6ZMM2 481 aa16.3■□□□□ 0.2
RETREG3-202ENST00000585726 DYNLRB2Q8TF09 96 aa16.3■□□□□ 0.2
RETREG3-202ENST00000585726 NPIPB3Q92617 1050 aa16.3■□□□□ 0.2
RETREG3-202ENST00000585726 ZMAT5Q9UDW3 170 aaKnown RBP16.3■□□□□ 0.2
RETREG3-202ENST00000585726 RCL1Q9Y2P8 373 aaKnown RBP16.3■□□□□ 0.2
RETREG3-202ENST00000585726 UFC1Q9Y3C8 167 aa16.3■□□□□ 0.2
RETREG3-202ENST00000585726 TMEM213A2RRL7 107 aa16.29■□□□□ 0.2
RETREG3-202ENST00000585726 IGLV1-51P01701 117 aa16.29■□□□□ 0.2
RETREG3-202ENST00000585726 CBLN1P23435 193 aa16.29■□□□□ 0.2
RETREG3-202ENST00000585726 TIGITQ495A1 244 aa16.29■□□□□ 0.2
RETREG3-202ENST00000585726 TMEM190Q8WZ59 177 aa16.29■□□□□ 0.2
RETREG3-202ENST00000585726 PRR25Q96S07 402 aa16.29■□□□□ 0.2
RETREG3-202ENST00000585726 A8MWP6 167 aa16.28■□□□□ 0.2
RETREG3-202ENST00000585726 SCGB2A1O75556 95 aa16.28■□□□□ 0.2
RETREG3-202ENST00000585726 S100A10P60903 97 aa16.28■□□□□ 0.2
RETREG3-202ENST00000585726 SMIM8Q96KF7 97 aa16.28■□□□□ 0.2
RETREG3-202ENST00000585726 RAB40CQ96S21 281 aa16.28■□□□□ 0.2
RETREG3-202ENST00000585726 SIGLEC8Q9NYZ4 499 aa16.28■□□□□ 0.2
RETREG3-202ENST00000585726 ZNF256Q9Y2P7 627 aaPredicted RBP16.28■□□□□ 0.2
RETREG3-202ENST00000585726 WI2-2373I1.2A0A1W2PRP0 233 aa16.27■□□□□ 0.2
RETREG3-202ENST00000585726 K7EPK0 472 aa16.27■□□□□ 0.2
RETREG3-202ENST00000585726 L7N2F9 121 aa16.27■□□□□ 0.2
RETREG3-202ENST00000585726 GPX4P36969 197 aaPredicted RBP16.27■□□□□ 0.2
RETREG3-202ENST00000585726 PAX9P55771 341 aa16.27■□□□□ 0.2
RETREG3-202ENST00000585726 VAMP2P63027 116 aa16.27■□□□□ 0.2
RETREG3-202ENST00000585726 ZNF600Q6ZNG1 722 aa16.27■□□□□ 0.2
RETREG3-202ENST00000585726 ZNF414Q96IQ9 312 aa16.27■□□□□ 0.2
RETREG3-202ENST00000585726 SLC35E1Q96K37 410 aa16.27■□□□□ 0.2
RETREG3-202ENST00000585726 PUS1Q9Y606 427 aaKnown RBP eCLIP16.27■□□□□ 0.2
RETREG3-202ENST00000585726 TRAV30A0A087WSZ9 112 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms