RNA–Protein interactions for RNA: ENST00000584476.1

MSI2-219, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-219	ENST00000584476	ABCA12	Q86UK0	2595 aa		4.59	□□□□□ -1.67
MSI2-219	ENST00000584476	SLC7A5P1	Q8MH63	180 aa		4.59	□□□□□ -1.67
MSI2-219	ENST00000584476	SIGLECL1	Q8N7X8	197 aa		4.59	□□□□□ -1.67
MSI2-219	ENST00000584476	LFNG	Q8NES3	379 aa		4.59	□□□□□ -1.67
MSI2-219	ENST00000584476	OR5T1	Q8NG75	326 aa		4.59	□□□□□ -1.67
MSI2-219	ENST00000584476	OR2G3	Q8NGZ4	309 aa		4.59	□□□□□ -1.67
MSI2-219	ENST00000584476	OR1P1	Q8NH06	330 aa		4.59	□□□□□ -1.67
MSI2-219	ENST00000584476	OR2T6	Q8NHC8	308 aa		4.59	□□□□□ -1.67
MSI2-219	ENST00000584476	CXorf58	Q96LI9	332 aa		4.59	□□□□□ -1.67
MSI2-219	ENST00000584476	MGST2	Q99735	147 aa		4.59	□□□□□ -1.67
MSI2-219	ENST00000584476	GGACT	Q9BVM4	153 aa		4.59	□□□□□ -1.67
MSI2-219	ENST00000584476	PARD6G	Q9BYG4	376 aa	Predicted RBP	4.59	□□□□□ -1.67
MSI2-219	ENST00000584476	PRDM13	Q9H4Q3	707 aa		4.59	□□□□□ -1.67
MSI2-219	ENST00000584476	MRPL36	Q9P0J6	103 aa	Known RBP	4.59	□□□□□ -1.67
MSI2-219	ENST00000584476	WDR83OS	Q9Y284	106 aa		4.59	□□□□□ -1.67
MSI2-219	ENST00000584476	CELSR2	Q9HCU4	2923 aa		4.58	□□□□□ -1.68
MSI2-219	ENST00000584476	APC	P25054	2843 aa		4.58	□□□□□ -1.68
MSI2-219	ENST00000584476	IGKV1OR2-108	A0A075B7D4	117 aa		4.58	□□□□□ -1.68
MSI2-219	ENST00000584476	NPIPB5	A8MRT5	1133 aa		4.58	□□□□□ -1.68
MSI2-219	ENST00000584476	ZNF705E	A8MWA4	302 aa	Predicted RBP	4.58	□□□□□ -1.68
MSI2-219	ENST00000584476	TEX46	H3BTG2	121 aa		4.58	□□□□□ -1.68
MSI2-219	ENST00000584476	LY6G6D	O95868	133 aa		4.58	□□□□□ -1.68
MSI2-219	ENST00000584476	CRYGC	P07315	174 aa		4.58	□□□□□ -1.68
MSI2-219	ENST00000584476	GPX4	P36969	197 aa	Predicted RBP	4.58	□□□□□ -1.68
MSI2-219	ENST00000584476	SRP14	P37108	136 aa	Known RBP	4.58	□□□□□ -1.68
MSI2-219	ENST00000584476	OPRK1	P41145	380 aa		4.58	□□□□□ -1.68
MSI2-219	ENST00000584476	SULT1A2	P50226	295 aa		4.58	□□□□□ -1.68
MSI2-219	ENST00000584476	ELL	P55199	621 aa	Predicted RBP	4.58	□□□□□ -1.68
MSI2-219	ENST00000584476	RAB14	P61106	215 aa		4.58	□□□□□ -1.68
MSI2-219	ENST00000584476	DEFA5	Q01523	94 aa		4.58	□□□□□ -1.68
MSI2-219	ENST00000584476	AKR1C1	Q04828	323 aa		4.58	□□□□□ -1.68
MSI2-219	ENST00000584476	ECSCR	Q19T08	205 aa		4.58	□□□□□ -1.68
MSI2-219	ENST00000584476	C19orf54	Q5BKX5	351 aa		4.58	□□□□□ -1.68
MSI2-219	ENST00000584476	MIC13	Q5XKP0	118 aa		4.58	□□□□□ -1.68
MSI2-219	ENST00000584476	EIF5AL1	Q6IS14	154 aa	Known RBP	4.58	□□□□□ -1.68
MSI2-219	ENST00000584476	ACSM6	Q6P461	480 aa		4.58	□□□□□ -1.68
MSI2-219	ENST00000584476	UNQ5815/PRO19632	Q6UWF5	114 aa		4.58	□□□□□ -1.68
MSI2-219	ENST00000584476	CENPV	Q7Z7K6	275 aa	Predicted RBP	4.58	□□□□□ -1.68
MSI2-219	ENST00000584476	TTC9C	Q8N5M4	171 aa		4.58	□□□□□ -1.68
MSI2-219	ENST00000584476	OR5R1	Q8NH85	324 aa		4.58	□□□□□ -1.68
MSI2-219	ENST00000584476	SGMS2	Q8NHU3	365 aa		4.58	□□□□□ -1.68
MSI2-219	ENST00000584476	RNASEH2C	Q8TDP1	164 aa	Known RBP	4.58	□□□□□ -1.68
MSI2-219	ENST00000584476	CACNG8	Q8WXS5	425 aa		4.58	□□□□□ -1.68
MSI2-219	ENST00000584476	NPIPB3	Q92617	1050 aa		4.58	□□□□□ -1.68
MSI2-219	ENST00000584476	GNPNAT1	Q96EK6	184 aa	Predicted RBP	4.58	□□□□□ -1.68
MSI2-219	ENST00000584476	ACY3	Q96HD9	319 aa		4.58	□□□□□ -1.68
MSI2-219	ENST00000584476	DUX5	Q96PT3	197 aa		4.58	□□□□□ -1.68
MSI2-219	ENST00000584476	PSMG3	Q9BT73	122 aa	Predicted RBP	4.58	□□□□□ -1.68
MSI2-219	ENST00000584476	NPCDR1	Q9BY65	106 aa		4.58	□□□□□ -1.68
MSI2-219	ENST00000584476	KRTAP17-1	Q9BYP8	105 aa		4.58	□□□□□ -1.68
MSI2-219	ENST00000584476	VSIR	Q9H7M9	311 aa		4.58	□□□□□ -1.68
MSI2-219	ENST00000584476	NPVF	Q9HCQ7	196 aa		4.58	□□□□□ -1.68
MSI2-219	ENST00000584476	LINC00527	Q9UJ94	153 aa		4.58	□□□□□ -1.68
MSI2-219	ENST00000584476	PITPNC1	Q9UKF7	332 aa		4.58	□□□□□ -1.68
MSI2-219	ENST00000584476	VPREB3	Q9UKI3	123 aa		4.58	□□□□□ -1.68
MSI2-219	ENST00000584476	LSM4	Q9Y4Z0	139 aa	Known RBP	4.58	□□□□□ -1.68
MSI2-219	ENST00000584476	TIMM9	Q9Y5J7	89 aa		4.58	□□□□□ -1.68
MSI2-219	ENST00000584476		S4R3C0	116 aa		4.58	□□□□□ -1.68
MSI2-219	ENST00000584476	CRYBG3	Q68DQ2	2970 aa		4.58	□□□□□ -1.68
MSI2-219	ENST00000584476	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	4.57	□□□□□ -1.68
MSI2-219	ENST00000584476	TNC	P24821	2201 aa		4.57	□□□□□ -1.68
MSI2-219	ENST00000584476	GCN1	Q92616	2671 aa	Known RBP	4.57	□□□□□ -1.68
MSI2-219	ENST00000584476	IGLV11-55	A0A075B6I3	123 aa		4.57	□□□□□ -1.68
MSI2-219	ENST00000584476	IGKV1D-37	A0A075B6S9	117 aa		4.57	□□□□□ -1.68
MSI2-219	ENST00000584476	TRAV41	A0A0B4J266	112 aa		4.57	□□□□□ -1.68
MSI2-219	ENST00000584476	LINC00862	A6NCI5	91 aa		4.57	□□□□□ -1.68
MSI2-219	ENST00000584476	BTBD17	A6NE02	478 aa		4.57	□□□□□ -1.68
MSI2-219	ENST00000584476	FNDC10	F2Z333	226 aa		4.57	□□□□□ -1.68
MSI2-219	ENST00000584476		I3L2K1	104 aa		4.57	□□□□□ -1.68
MSI2-219	ENST00000584476		K7EIM0	57 aa		4.57	□□□□□ -1.68
MSI2-219	ENST00000584476	AGPAT2	O15120	278 aa		4.57	□□□□□ -1.68
MSI2-219	ENST00000584476	SOX15	O60248	233 aa		4.57	□□□□□ -1.68
MSI2-219	ENST00000584476	EIF3G	O75821	320 aa	Known RBP eCLIP	4.57	□□□□□ -1.68
MSI2-219	ENST00000584476	YIF1A	O95070	293 aa		4.57	□□□□□ -1.68
MSI2-219	ENST00000584476	NDUFB8	O95169	186 aa		4.57	□□□□□ -1.68
MSI2-219	ENST00000584476	MT-CO2	P00403	227 aa		4.57	□□□□□ -1.68
MSI2-219	ENST00000584476	IGHG2	P01859	326 aa		4.57	□□□□□ -1.68
MSI2-219	ENST00000584476	DEFA4	P12838	97 aa		4.57	□□□□□ -1.68
MSI2-219	ENST00000584476	OR10J1	P30954	320 aa		4.57	□□□□□ -1.68
MSI2-219	ENST00000584476	CAMLG	P49069	296 aa		4.57	□□□□□ -1.68
MSI2-219	ENST00000584476	RND2	P52198	227 aa		4.57	□□□□□ -1.68
MSI2-219	ENST00000584476	RAB2A	P61019	212 aa		4.57	□□□□□ -1.68
MSI2-219	ENST00000584476	TMEM95	Q3KNT9	176 aa		4.57	□□□□□ -1.68
MSI2-219	ENST00000584476	GCSAML	Q5JQS6	135 aa		4.57	□□□□□ -1.68
MSI2-219	ENST00000584476	FFAR4	Q5NUL3	377 aa		4.57	□□□□□ -1.68
MSI2-219	ENST00000584476	AKR1C8P	Q5T2L2	129 aa		4.57	□□□□□ -1.68
MSI2-219	ENST00000584476		Q6ZRG5	221 aa		4.57	□□□□□ -1.68
MSI2-219	ENST00000584476	C16orf82	Q7Z2V1	217 aa		4.57	□□□□□ -1.68
MSI2-219	ENST00000584476	TMEM144	Q7Z5S9	345 aa		4.57	□□□□□ -1.68
MSI2-219	ENST00000584476	SLC35E3	Q7Z769	313 aa		4.57	□□□□□ -1.68
MSI2-219	ENST00000584476	TEX29	Q8N6K0	151 aa		4.57	□□□□□ -1.68
MSI2-219	ENST00000584476	ZNF709	Q8N972	641 aa		4.57	□□□□□ -1.68
MSI2-219	ENST00000584476	SYT8	Q8NBV8	401 aa		4.57	□□□□□ -1.68
MSI2-219	ENST00000584476	FAM110D	Q8TAY7	271 aa	Predicted RBP	4.57	□□□□□ -1.68
MSI2-219	ENST00000584476	FAM213B	Q8TBF2	198 aa		4.57	□□□□□ -1.68
MSI2-219	ENST00000584476	SLC35E1	Q96K37	410 aa		4.57	□□□□□ -1.68
MSI2-219	ENST00000584476	NOL4L	Q96MY1	436 aa	Predicted RBP	4.57	□□□□□ -1.68
MSI2-219	ENST00000584476	GGTLC1	Q9BX51	225 aa		4.57	□□□□□ -1.68
MSI2-219	ENST00000584476	RPRM	Q9NS64	109 aa		4.57	□□□□□ -1.68
MSI2-219	ENST00000584476	SLC45A2	Q9UMX9	530 aa		4.57	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms