RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-233	ENST00000584186	TOMM20L	Q6UXN7	152 aa		10.13	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	FAM219A	Q8IW50	185 aa		10.13	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	SELENOH	Q8IZQ5	122 aa	Known RBP	10.13	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	GBGT1	Q8N5D6	347 aa		10.13	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	IL17D	Q8TAD2	202 aa		10.13	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	GINS3	Q9BRX5	216 aa		10.13	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	CACNG5	Q9UF02	275 aa		10.13	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	GPR132	Q9UNW8	380 aa		10.13	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	CCDC160	A6NGH7	325 aa		10.12	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	CEBPZOS	A8MTT3	80 aa		10.12	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	GSTZ1	O43708	216 aa	Predicted RBP	10.12	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	NXPH3	O95157	252 aa		10.12	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	TMEM50A	O95807	157 aa		10.12	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	SPCS3	P61009	180 aa		10.12	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	MLANA	Q16655	118 aa		10.12	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	ZNF600	Q6ZNG1	722 aa		10.12	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	APRG1	Q8IVJ8	170 aa		10.12	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	GPR146	Q96CH1	333 aa		10.12	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	OVOL2	Q9BRP0	275 aa		10.12	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	HEYL	Q9NQ87	328 aa	Predicted RBP	10.12	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	PRR13	Q9NZ81	148 aa		10.12	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	SCP2D1	Q9UJQ7	156 aa		10.12	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	PUS1	Q9Y606	427 aa	Known RBP eCLIP	10.12	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	LCE6A	A0A183	80 aa		10.11	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	APOH	P02749	345 aa	Predicted RBP	10.11	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	AKR1C4	P17516	323 aa		10.11	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	BMI1	P35226	326 aa		10.11	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	RPL11	P62913	178 aa	Known RBP	10.11	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	TCF24	Q7RTU0	167 aa		10.11	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	WFDC3	Q8IUB2	231 aa		10.11	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	STPG3	Q8N7X2	389 aa		10.11	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	ST8SIA2	Q92186	375 aa		10.11	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	FNDC4	Q9H6D8	234 aa	Predicted RBP	10.11	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	MRPL36	Q9P0J6	103 aa	Known RBP	10.11	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	KCNIP3	Q9Y2W7	256 aa		10.11	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186		A0A1B0GU03	582 aa		10.1	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	CLN5	O75503	358 aa		10.1	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	HTR2B	P41595	481 aa		10.1	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	ZNF124	Q15973	351 aa		10.1	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	DEFB135	Q30KP9	77 aa		10.1	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	PYDC2	Q56P42	97 aa		10.1	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	PVRIG	Q6DKI7	326 aa		10.1	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	OR52E5	Q8NH55	327 aa		10.1	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	TMEM230	Q96A57	120 aa		10.1	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	SCGB3A2	Q96PL1	93 aa		10.1	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	ZFAND3	Q9H8U3	227 aa		10.1	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	TMEM56-RWDD3	S4R434	201 aa		10.1	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	RPS10-NUDT3	A0A1W2PQS6	291 aa		10.09	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	DNASE2	O00115	360 aa	Predicted RBP	10.09	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	SPRY2	O43597	315 aa		10.09	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	SCGB2A1	O75556	95 aa		10.09	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	DFFB	O76075	338 aa		10.09	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	PAFAH1B2	P68402	229 aa		10.09	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	TMEM187	Q14656	261 aa		10.09	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	BSX	Q3C1V8	233 aa		10.09	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	AARD	Q4LEZ3	155 aa		10.09	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	FAM90A2P	Q658T7	463 aa		10.09	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	LILRB2	Q8N423	598 aa		10.09	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	SLC24A4	Q8NFF2	622 aa		10.09	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	OR4X1	Q8NH49	305 aa		10.09	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	GALNT14	Q96FL9	552 aa		10.09	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	SOST	Q9BQB4	213 aa		10.09	□□□□□ -0.79
CDK5RAP3-233	ENST00000584186	UBE2C	O00762	179 aa		10.08	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	SULT1A3	P0DMM9	295 aa		10.08	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	SULT1A4	P0DMN0	295 aa		10.08	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	NPPC	P23582	126 aa		10.08	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	CMC4	P56277	68 aa	Predicted RBP	10.08	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	TIGIT	Q495A1	244 aa		10.08	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186		Q6ZWC4	215 aa		10.08	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	TMED4	Q7Z7H5	227 aa		10.08	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	IL22RA2	Q969J5	263 aa		10.08	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	LYST	Q99698	3801 aa		10.08	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	MS4A6A	Q9H2W1	248 aa		10.08	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	VSIR	Q9H7M9	311 aa		10.08	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	MAP6D1	Q9H9H5	199 aa		10.08	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	KIR2DL5B	A0A0G2JN68	375 aa		10.07	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	KIR2DL5B	A0A0G2JPC4	375 aa		10.07	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186		A0A0J9YWU9	116 aa		10.07	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	CD5	P06127	495 aa		10.07	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	ANXA3	P12429	323 aa		10.07	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	FAU	P35544	74 aa	Known RBP	10.07	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	RND2	P52198	227 aa		10.07	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	C2orf83	Q53S99	150 aa		10.07	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	LYZL2	Q7Z4W2	148 aa		10.07	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	KIR2DL5A	Q8N109	375 aa		10.07	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	TOMM5	Q8N4H5	51 aa		10.07	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	KIR2DL5B	Q8NHK3	375 aa		10.07	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	METTL26	Q96S19	204 aa		10.07	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	TMEM231	Q9H6L2	316 aa		10.07	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	RABAC1	Q9UI14	185 aa		10.07	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	TRAV30	A0A087WSZ9	112 aa		10.06	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186		A0A1W2PS18	150 aa		10.06	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	IFNA10	P01566	189 aa		10.06	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	IGKV1-17	P01599	117 aa		10.06	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	NPY1R	P25929	384 aa		10.06	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	S100A5	P33763	92 aa		10.06	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	AP3S2	P59780	193 aa		10.06	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	SUPT4H1	P63272	117 aa	Known RBP	10.06	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	PMS2P11	Q13670	270 aa		10.06	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	KLF9	Q13886	244 aa	Predicted RBP	10.06	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms