RNA–Protein interactions for RNA: ENST00000583527.1

CRLF3-204, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 378 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-204ENST00000583527 PVRIGQ6DKI7 326 aa4.39□□□□□ -1.71
CRLF3-204ENST00000583527 CLEC2AQ6UVW9 174 aa4.39□□□□□ -1.71
CRLF3-204ENST00000583527 SPNS3Q6ZMD2 512 aa4.39□□□□□ -1.71
CRLF3-204ENST00000583527 C1orf122Q6ZSJ8 110 aa4.39□□□□□ -1.71
CRLF3-204ENST00000583527 CYP2G1PQ6ZSU1 146 aa4.39□□□□□ -1.71
CRLF3-204ENST00000583527 MIR17HGQ75NE6 70 aa4.39□□□□□ -1.71
CRLF3-204ENST00000583527 SLC35E3Q7Z769 313 aa4.39□□□□□ -1.71
CRLF3-204ENST00000583527 PPP1R27Q86WC6 154 aa4.39□□□□□ -1.71
CRLF3-204ENST00000583527 DYNAPQ8N1N2 210 aa4.39□□□□□ -1.71
CRLF3-204ENST00000583527 Q8N6K4 173 aa4.39□□□□□ -1.71
CRLF3-204ENST00000583527 OR1P1Q8NH06 330 aa4.39□□□□□ -1.71
CRLF3-204ENST00000583527 C10orf105Q8TEF2 133 aa4.39□□□□□ -1.71
CRLF3-204ENST00000583527 C17orf50Q8WW18 174 aa4.39□□□□□ -1.71
CRLF3-204ENST00000583527 CACNG8Q8WXS5 425 aa4.39□□□□□ -1.71
CRLF3-204ENST00000583527 ARPC1AQ92747 370 aa4.39□□□□□ -1.71
CRLF3-204ENST00000583527 RPUSD4Q96CM3 377 aaKnown RBP4.39□□□□□ -1.71
CRLF3-204ENST00000583527 RNF5Q99942 180 aa4.39□□□□□ -1.71
CRLF3-204ENST00000583527 SMIM7Q9BQ49 75 aa4.39□□□□□ -1.71
CRLF3-204ENST00000583527 SRSF8Q9BRL6 282 aaKnown RBP4.39□□□□□ -1.71
CRLF3-204ENST00000583527 TMPRSS5Q9H3S3 457 aa4.39□□□□□ -1.71
CRLF3-204ENST00000583527 LPAR2Q9HBW0 351 aa4.39□□□□□ -1.71
CRLF3-204ENST00000583527 NPVFQ9HCQ7 196 aa4.39□□□□□ -1.71
CRLF3-204ENST00000583527 SMCO4Q9NRQ5 59 aa4.39□□□□□ -1.71
CRLF3-204ENST00000583527 MRPL36Q9P0J6 103 aaKnown RBP4.39□□□□□ -1.71
CRLF3-204ENST00000583527 FUT9Q9Y231 359 aa4.39□□□□□ -1.71
CRLF3-204ENST00000583527 TBL2Q9Y4P3 447 aaKnown RBP4.39□□□□□ -1.71
CRLF3-204ENST00000583527 DMRT1Q9Y5R6 373 aa4.39□□□□□ -1.71
CRLF3-204ENST00000583527 F11RQ9Y624 299 aaKnown RBP4.39□□□□□ -1.71
CRLF3-204ENST00000583527 CELSR1Q9NYQ6 3014 aa4.38□□□□□ -1.71
CRLF3-204ENST00000583527 CSMD2Q7Z408 3487 aa4.38□□□□□ -1.71
CRLF3-204ENST00000583527 VPS13CQ709C8 3753 aa4.38□□□□□ -1.71
CRLF3-204ENST00000583527 ANK3Q12955 4377 aaKnown RBP4.38□□□□□ -1.71
CRLF3-204ENST00000583527 IGKV1D-37A0A075B6S9 117 aa4.38□□□□□ -1.71
CRLF3-204ENST00000583527 IGHV4-30-2A0A087WSY4 118 aa4.38□□□□□ -1.71
CRLF3-204ENST00000583527 TRAV40A0A0B4J280 105 aa4.38□□□□□ -1.71
CRLF3-204ENST00000583527 TCRBV4S1A1TA0A5B7 111 aa4.38□□□□□ -1.71
CRLF3-204ENST00000583527 PSMB11A5LHX3 300 aa4.38□□□□□ -1.71
CRLF3-204ENST00000583527 VWC2LB2RUY7 222 aa4.38□□□□□ -1.71
CRLF3-204ENST00000583527 C11orf94C9JXX5 98 aa4.38□□□□□ -1.71
CRLF3-204ENST00000583527 NDUFS8O00217 210 aa4.38□□□□□ -1.71
CRLF3-204ENST00000583527 CORTO00230 105 aa4.38□□□□□ -1.71
CRLF3-204ENST00000583527 NPFFO15130 113 aa4.38□□□□□ -1.71
CRLF3-204ENST00000583527 COX7A2P2O60397 106 aa4.38□□□□□ -1.71
CRLF3-204ENST00000583527 PAGE4O60829 102 aa4.38□□□□□ -1.71
CRLF3-204ENST00000583527 NDUFS6O75380 124 aaKnown RBP4.38□□□□□ -1.71
CRLF3-204ENST00000583527 TOX4O94842 621 aa4.38□□□□□ -1.71
CRLF3-204ENST00000583527 CXorf1O96002 111 aa4.38□□□□□ -1.71
CRLF3-204ENST00000583527 IGHV3-48P01763 117 aa4.38□□□□□ -1.71
CRLF3-204ENST00000583527 CRYGCP07315 174 aa4.38□□□□□ -1.71
CRLF3-204ENST00000583527 OR5G3P0C626 314 aa4.38□□□□□ -1.71
CRLF3-204ENST00000583527 TMEM11P17152 192 aa4.38□□□□□ -1.71
CRLF3-204ENST00000583527 GATA2P23769 480 aaPredicted RBP4.38□□□□□ -1.71
CRLF3-204ENST00000583527 CD24P25063 80 aa4.38□□□□□ -1.71
CRLF3-204ENST00000583527 ATP5J2P56134 94 aa4.38□□□□□ -1.71
CRLF3-204ENST00000583527 UBE2L3P68036 154 aaKnown RBP4.38□□□□□ -1.71
CRLF3-204ENST00000583527 PNRC1Q12796 327 aaPredicted RBP4.38□□□□□ -1.71
CRLF3-204ENST00000583527 KIAA0141Q14154 515 aaPredicted RBP4.38□□□□□ -1.71
CRLF3-204ENST00000583527 HES1Q14469 280 aa4.38□□□□□ -1.71
CRLF3-204ENST00000583527 SSX2Q16385 188 aa4.38□□□□□ -1.71
CRLF3-204ENST00000583527 C5orf64Q2M2E5 130 aa4.38□□□□□ -1.71
CRLF3-204ENST00000583527 RBMS3Q6XE24 437 aaKnown RBP4.38□□□□□ -1.71
CRLF3-204ENST00000583527 NPBQ8NG41 125 aa4.38□□□□□ -1.71
CRLF3-204ENST00000583527 OR2T10Q8NGZ9 312 aa4.38□□□□□ -1.71
CRLF3-204ENST00000583527 OR4F5Q8NH21 305 aa4.38□□□□□ -1.71
CRLF3-204ENST00000583527 OR2T6Q8NHC8 308 aa4.38□□□□□ -1.71
CRLF3-204ENST00000583527 FAM168AQ92567 244 aa4.38□□□□□ -1.71
CRLF3-204ENST00000583527 C11orf52Q96A22 123 aa4.38□□□□□ -1.71
CRLF3-204ENST00000583527 TVP23CQ96ET8 276 aa4.38□□□□□ -1.71
CRLF3-204ENST00000583527 PERPQ96FX8 193 aa4.38□□□□□ -1.71
CRLF3-204ENST00000583527 EAF1Q96JC9 268 aaPredicted RBP4.38□□□□□ -1.71
CRLF3-204ENST00000583527 OR4F4Q96R69 305 aa4.38□□□□□ -1.71
CRLF3-204ENST00000583527 MRPL32Q9BYC8 188 aaKnown RBP4.38□□□□□ -1.71
CRLF3-204ENST00000583527 PARLQ9H300 379 aa4.38□□□□□ -1.71
CRLF3-204ENST00000583527 RPS10P5Q9NQ39 176 aa4.38□□□□□ -1.71
CRLF3-204ENST00000583527 DOK5Q9P104 306 aa4.38□□□□□ -1.71
CRLF3-204ENST00000583527 YTHDF2Q9Y5A9 579 aaKnown RBP4.38□□□□□ -1.71
CRLF3-204ENST00000583527 ARL2-SNX15V9GYD0 113 aa4.38□□□□□ -1.71
CRLF3-204ENST00000583527 GCN1Q92616 2671 aaKnown RBP4.38□□□□□ -1.71
CRLF3-204ENST00000583527 MTORP42345 2549 aa4.37□□□□□ -1.71
CRLF3-204ENST00000583527 HECTD1Q9ULT8 2610 aa4.37□□□□□ -1.71
CRLF3-204ENST00000583527 A0A087WWC5 75 aa4.37□□□□□ -1.71
CRLF3-204ENST00000583527 SCO2A0A1W2PP80 73 aa4.37□□□□□ -1.71
CRLF3-204ENST00000583527 A1L4Q6 167 aa4.37□□□□□ -1.71
CRLF3-204ENST00000583527 ZNF727A8MUV8 499 aa4.37□□□□□ -1.71
CRLF3-204ENST00000583527 F6UZH7 168 aa4.37□□□□□ -1.71
CRLF3-204ENST00000583527 PDE6DO43924 150 aa4.37□□□□□ -1.71
CRLF3-204ENST00000583527 OR7C2O60412 319 aa4.37□□□□□ -1.71
CRLF3-204ENST00000583527 MT-CO2P00403 227 aa4.37□□□□□ -1.71
CRLF3-204ENST00000583527 COX6B1P14854 86 aa4.37□□□□□ -1.71
CRLF3-204ENST00000583527 TAS2R45P59539 299 aa4.37□□□□□ -1.71
CRLF3-204ENST00000583527 SRSF1Q07955 248 aaKnown RBP eCLIP4.37□□□□□ -1.71
CRLF3-204ENST00000583527 ADIRFQ15847 76 aa4.37□□□□□ -1.71
CRLF3-204ENST00000583527 ZNF674Q2M3X9 581 aa4.37□□□□□ -1.71
CRLF3-204ENST00000583527 FAM78BQ5VT40 261 aa4.37□□□□□ -1.71
CRLF3-204ENST00000583527 CST9LP1Q5W188 147 aa4.37□□□□□ -1.71
CRLF3-204ENST00000583527 RUSC1-AS1Q66K80 236 aa4.37□□□□□ -1.71
CRLF3-204ENST00000583527 C15orf54Q8N8G6 183 aa4.37□□□□□ -1.71
CRLF3-204ENST00000583527 OR51G1Q8NGK1 321 aa4.37□□□□□ -1.71
CRLF3-204ENST00000583527 NPIPB3Q92617 1050 aa4.37□□□□□ -1.71
CRLF3-204ENST00000583527 NRGNQ92686 78 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms