RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 SMIM17P0DL12 118 aa4.79□□□□□ -1.64
RTTN-209ENST00000583043 BTF3P20290 206 aaKnown RBP4.79□□□□□ -1.64
RTTN-209ENST00000583043 CX3CL1P78423 397 aa4.79□□□□□ -1.64
RTTN-209ENST00000583043 PAX2Q02962 417 aa4.79□□□□□ -1.64
RTTN-209ENST00000583043 TMEM78Q5T7P6 136 aa4.79□□□□□ -1.64
RTTN-209ENST00000583043 CRIP3Q6Q6R5 217 aa4.79□□□□□ -1.64
RTTN-209ENST00000583043 OR10AG1Q8NH19 301 aa4.79□□□□□ -1.64
RTTN-209ENST00000583043 ASCL2Q99929 193 aa4.79□□□□□ -1.64
RTTN-209ENST00000583043 A0A1B0GUT8 65 aa4.79□□□□□ -1.64
RTTN-209ENST00000583043 LILRA1O75019 489 aa4.79□□□□□ -1.64
RTTN-209ENST00000583043 TMEM200BQ69YZ2 307 aa4.79□□□□□ -1.64
RTTN-209ENST00000583043 HSPB9Q9BQS6 159 aa4.79□□□□□ -1.64
RTTN-209ENST00000583043 ADAMTS9Q9P2N4 1935 aa4.79□□□□□ -1.64
RTTN-209ENST00000583043 NDUFB8O95169 186 aa4.79□□□□□ -1.64
RTTN-209ENST00000583043 LOXL3P58215 753 aa4.79□□□□□ -1.64
RTTN-209ENST00000583043 PRR20EP86478 221 aa4.79□□□□□ -1.64
RTTN-209ENST00000583043 PRR20CP86479 221 aa4.79□□□□□ -1.64
RTTN-209ENST00000583043 PRR20DP86480 221 aa4.79□□□□□ -1.64
RTTN-209ENST00000583043 PRR20BP86481 221 aa4.79□□□□□ -1.64
RTTN-209ENST00000583043 PRR20AP86496 221 aa4.79□□□□□ -1.64
RTTN-209ENST00000583043 HOXA4Q00056 320 aaPredicted RBP4.79□□□□□ -1.64
RTTN-209ENST00000583043 C17orf58Q2M2W7 97 aa4.79□□□□□ -1.64
RTTN-209ENST00000583043 SPACA3Q8IXA5 215 aa4.79□□□□□ -1.64
RTTN-209ENST00000583043 ARPC1AQ92747 370 aa4.79□□□□□ -1.64
RTTN-209ENST00000583043 LSM4Q9Y4Z0 139 aaKnown RBP4.79□□□□□ -1.64
RTTN-209ENST00000583043 IGHV2-26A0A0B4J1V2 119 aa4.79□□□□□ -1.64
RTTN-209ENST00000583043 K7ENP7 123 aa4.79□□□□□ -1.64
RTTN-209ENST00000583043 TCAPO15273 167 aa4.79□□□□□ -1.64
RTTN-209ENST00000583043 IGHV2-70P01814 119 aa4.79□□□□□ -1.64
RTTN-209ENST00000583043 CLEC2AQ6UVW9 174 aa4.79□□□□□ -1.64
RTTN-209ENST00000583043 HIST1H2BLQ99880 126 aa4.79□□□□□ -1.64
RTTN-209ENST00000583043 VSIRQ9H7M9 311 aa4.79□□□□□ -1.64
RTTN-209ENST00000583043 KNTC1P50748 2209 aa4.79□□□□□ -1.64
RTTN-209ENST00000583043 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.79□□□□□ -1.64
RTTN-209ENST00000583043 ZNF503-AS2A6NEH8 195 aa4.79□□□□□ -1.64
RTTN-209ENST00000583043 FAM157AC9JC47 383 aa4.79□□□□□ -1.64
RTTN-209ENST00000583043 THBDP07204 575 aa4.79□□□□□ -1.64
RTTN-209ENST00000583043 CLEC12BQ2HXU8 276 aa4.79□□□□□ -1.64
RTTN-209ENST00000583043 TMEM97Q5BJF2 176 aa4.79□□□□□ -1.64
RTTN-209ENST00000583043 OCC1Q8TAD7 63 aa4.79□□□□□ -1.64
RTTN-209ENST00000583043 RP1P56715 2156 aa4.78□□□□□ -1.64
RTTN-209ENST00000583043 TOMM40O96008 361 aa4.78□□□□□ -1.64
RTTN-209ENST00000583043 PRTN3P24158 256 aa4.78□□□□□ -1.64
RTTN-209ENST00000583043 CAMPP49913 170 aa4.78□□□□□ -1.64
RTTN-209ENST00000583043 BATFQ16520 125 aa4.78□□□□□ -1.64
RTTN-209ENST00000583043 TPTE2P1Q5T6R2 138 aa4.78□□□□□ -1.64
RTTN-209ENST00000583043 ERASQ7Z444 233 aa4.78□□□□□ -1.64
RTTN-209ENST00000583043 NDUFS8O00217 210 aa4.78□□□□□ -1.64
RTTN-209ENST00000583043 LEPROTL1O95214 131 aa4.78□□□□□ -1.64
RTTN-209ENST00000583043 PAX1P15863 534 aa4.78□□□□□ -1.64
RTTN-209ENST00000583043 ATP5G2Q06055 141 aa4.78□□□□□ -1.64
RTTN-209ENST00000583043 FBXL19-AS1Q494R0 122 aa4.78□□□□□ -1.64
RTTN-209ENST00000583043 VN1R17PQ8TDU5 208 aa4.78□□□□□ -1.64
RTTN-209ENST00000583043 DMRTA2Q96SC8 542 aa4.78□□□□□ -1.64
RTTN-209ENST00000583043 TMUB1Q9BVT8 246 aa4.78□□□□□ -1.64
RTTN-209ENST00000583043 A0A0G2JNJ9 132 aa4.78□□□□□ -1.64
RTTN-209ENST00000583043 HLA-DRB1P01911 266 aa4.78□□□□□ -1.64
RTTN-209ENST00000583043 S100A4P26447 101 aaKnown RBP4.78□□□□□ -1.64
RTTN-209ENST00000583043 SRIP30626 198 aa4.78□□□□□ -1.64
RTTN-209ENST00000583043 REG1BP48304 166 aa4.78□□□□□ -1.64
RTTN-209ENST00000583043 SLC35B1P78383 322 aa4.78□□□□□ -1.64
RTTN-209ENST00000583043 SSX7Q7RTT5 188 aa4.78□□□□□ -1.64
RTTN-209ENST00000583043 VKORC1L1Q8N0U8 176 aa4.78□□□□□ -1.64
RTTN-209ENST00000583043 WIPF2Q8TF74 440 aaPredicted RBP4.78□□□□□ -1.64
RTTN-209ENST00000583043 DDB2Q92466 427 aa4.78□□□□□ -1.64
RTTN-209ENST00000583043 MIEN1Q9BRT3 115 aa4.78□□□□□ -1.64
RTTN-209ENST00000583043 TPPP3Q9BW30 176 aa4.78□□□□□ -1.64
RTTN-209ENST00000583043 FGF23Q9GZV9 251 aaPredicted RBP4.78□□□□□ -1.64
RTTN-209ENST00000583043 Q9UFV3 132 aa4.78□□□□□ -1.64
RTTN-209ENST00000583043 IGHV1-3A0A0C4DH29 117 aa4.78□□□□□ -1.64
RTTN-209ENST00000583043 F2Z2F3 143 aa4.78□□□□□ -1.64
RTTN-209ENST00000583043 IGHV3-7P01780 117 aa4.78□□□□□ -1.64
RTTN-209ENST00000583043 ZNF137PP52743 207 aa4.78□□□□□ -1.64
RTTN-209ENST00000583043 EFNA4P52798 201 aa4.78□□□□□ -1.64
RTTN-209ENST00000583043 CACNG7P62955 275 aa4.78□□□□□ -1.64
RTTN-209ENST00000583043 Q6ZN92 141 aa4.78□□□□□ -1.64
RTTN-209ENST00000583043 FAM215AQ9Y5M1 114 aa4.78□□□□□ -1.64
RTTN-209ENST00000583043 DPRXA6NFQ7 191 aa4.77□□□□□ -1.65
RTTN-209ENST00000583043 C9JQL5 133 aa4.77□□□□□ -1.65
RTTN-209ENST00000583043 CXCL1P09341 107 aa4.77□□□□□ -1.65
RTTN-209ENST00000583043 TSPOP30536 169 aa4.77□□□□□ -1.65
RTTN-209ENST00000583043 PLP1P60201 277 aa4.77□□□□□ -1.65
RTTN-209ENST00000583043 UNQ5815/PRO19632Q6UWF5 114 aa4.77□□□□□ -1.65
RTTN-209ENST00000583043 TMEM116Q8NCL8 245 aa4.77□□□□□ -1.65
RTTN-209ENST00000583043 IGFBPL1Q8WX77 278 aa4.77□□□□□ -1.65
RTTN-209ENST00000583043 RNF125Q96EQ8 232 aa4.77□□□□□ -1.65
RTTN-209ENST00000583043 HS3ST6Q96QI5 342 aa4.77□□□□□ -1.65
RTTN-209ENST00000583043 Q9H3A6 140 aa4.77□□□□□ -1.65
RTTN-209ENST00000583043 MAP1LC3AQ9H492 121 aa4.77□□□□□ -1.65
RTTN-209ENST00000583043 ZNF581Q9P0T4 197 aa4.77□□□□□ -1.65
RTTN-209ENST00000583043 SMPXQ9UHP9 88 aa4.77□□□□□ -1.65
RTTN-209ENST00000583043 BUB1B-PAK6H3BSN5 160 aa4.77□□□□□ -1.65
RTTN-209ENST00000583043 NPPCP23582 126 aa4.77□□□□□ -1.65
RTTN-209ENST00000583043 HERVK_113P61574 105 aa4.77□□□□□ -1.65
RTTN-209ENST00000583043 HAPLN4Q86UW8 402 aa4.77□□□□□ -1.65
RTTN-209ENST00000583043 MS4A6AQ9H2W1 248 aa4.77□□□□□ -1.65
RTTN-209ENST00000583043 AHCTF1Q8WYP5 2266 aa4.77□□□□□ -1.65
RTTN-209ENST00000583043 TRBV6-1A0A0K0K1D8 114 aa4.77□□□□□ -1.65
RTTN-209ENST00000583043 ZNF672Q499Z4 452 aaPredicted RBP4.77□□□□□ -1.65
RTTN-209ENST00000583043 FAM106AQ4KMX7 169 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms