RNA–Protein interactions for RNA: ENST00000582303.1

CDC42EP4-208, Transcript of CDC42 effector protein 4, humanhuman

TSL 5

Gene CDC42EP4, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-208ENST00000582303 TRIM16LQ309B1 348 aa10.61□□□□□ -0.71
CDC42EP4-208ENST00000582303 RNASE10Q5GAN6 216 aaKnown RBP10.61□□□□□ -0.71
CDC42EP4-208ENST00000582303 LINC00336Q6ZUF6 198 aa10.61□□□□□ -0.71
CDC42EP4-208ENST00000582303 TRPT1Q86TN4 253 aaKnown RBP10.61□□□□□ -0.71
CDC42EP4-208ENST00000582303 SNX29P2Q8IUI4 249 aa10.61□□□□□ -0.71
CDC42EP4-208ENST00000582303 CCDC71LQ8N9Z2 235 aa10.61□□□□□ -0.71
CDC42EP4-208ENST00000582303 OR4X1Q8NH49 305 aa10.61□□□□□ -0.71
CDC42EP4-208ENST00000582303 RNASE11Q8TAA1 199 aaKnown RBP10.61□□□□□ -0.71
CDC42EP4-208ENST00000582303 VPS13DQ5THJ4 4388 aa10.61□□□□□ -0.71
CDC42EP4-208ENST00000582303 A0A087WXM4 84 aa10.6□□□□□ -0.71
CDC42EP4-208ENST00000582303 K7EQG2 157 aa10.6□□□□□ -0.71
CDC42EP4-208ENST00000582303 P2RY1P47900 373 aa10.6□□□□□ -0.71
CDC42EP4-208ENST00000582303 LSM3P62310 102 aaKnown RBP10.6□□□□□ -0.71
CDC42EP4-208ENST00000582303 SPINK9Q5DT21 86 aa10.6□□□□□ -0.71
CDC42EP4-208ENST00000582303 PVRIGQ6DKI7 326 aa10.6□□□□□ -0.71
CDC42EP4-208ENST00000582303 LILRB2Q8N423 598 aa10.6□□□□□ -0.71
CDC42EP4-208ENST00000582303 ZFAND1Q8TCF1 268 aa10.6□□□□□ -0.71
CDC42EP4-208ENST00000582303 C15orf40Q8WUR7 153 aa10.6□□□□□ -0.71
CDC42EP4-208ENST00000582303 C1QTNF4Q9BXJ3 329 aa10.6□□□□□ -0.71
CDC42EP4-208ENST00000582303 COPZ2Q9P299 210 aa10.6□□□□□ -0.71
CDC42EP4-208ENST00000582303 CACFD1Q9UGQ2 172 aa10.6□□□□□ -0.71
CDC42EP4-208ENST00000582303 APLNQ9ULZ1 77 aa10.6□□□□□ -0.71
CDC42EP4-208ENST00000582303 HERC2O95714 4834 aa10.6□□□□□ -0.71
CDC42EP4-208ENST00000582303 A0A0B4J293 547 aa10.59□□□□□ -0.71
CDC42EP4-208ENST00000582303 IGHV4-28A0A0C4DH34 117 aa10.59□□□□□ -0.71
CDC42EP4-208ENST00000582303 C3orf85A0A1B0GTC6 90 aa10.59□□□□□ -0.71
CDC42EP4-208ENST00000582303 A0A1B0GU03 582 aa10.59□□□□□ -0.71
CDC42EP4-208ENST00000582303 ZNF705EA8MWA4 302 aaPredicted RBP10.59□□□□□ -0.71
CDC42EP4-208ENST00000582303 RNASE2P10153 161 aaKnown RBP10.59□□□□□ -0.71
CDC42EP4-208ENST00000582303 HLA-DMBP28068 263 aa10.59□□□□□ -0.71
CDC42EP4-208ENST00000582303 TGFBR1P36897 503 aa10.59□□□□□ -0.71
CDC42EP4-208ENST00000582303 SNRPD3P62318 126 aaKnown RBP10.59□□□□□ -0.71
CDC42EP4-208ENST00000582303 MZT2AQ6P582 158 aa10.59□□□□□ -0.71
CDC42EP4-208ENST00000582303 FAM219AQ8IW50 185 aa10.59□□□□□ -0.71
CDC42EP4-208ENST00000582303 AP3S1Q92572 193 aa10.59□□□□□ -0.71
CDC42EP4-208ENST00000582303 YIPF6Q96EC8 236 aa10.59□□□□□ -0.71
CDC42EP4-208ENST00000582303 RNF126Q9BV68 326 aa10.59□□□□□ -0.71
CDC42EP4-208ENST00000582303 TBC1D24Q9ULP9 559 aa10.59□□□□□ -0.71
CDC42EP4-208ENST00000582303 IGKV1-5P01602 117 aa10.58□□□□□ -0.72
CDC42EP4-208ENST00000582303 ZNF688P0C7X2 276 aa10.58□□□□□ -0.72
CDC42EP4-208ENST00000582303 SLC25A4P12235 298 aa10.58□□□□□ -0.72
CDC42EP4-208ENST00000582303 ETV6P41212 452 aa10.58□□□□□ -0.72
CDC42EP4-208ENST00000582303 HTR2BP41595 481 aa10.58□□□□□ -0.72
CDC42EP4-208ENST00000582303 FAM24BQ8N5W8 94 aa10.58□□□□□ -0.72
CDC42EP4-208ENST00000582303 Q8WTZ3 238 aa10.58□□□□□ -0.72
CDC42EP4-208ENST00000582303 DNAH6Q9C0G6 4158 aa10.57□□□□□ -0.72
CDC42EP4-208ENST00000582303 FAM25AB3EWG3 89 aa10.57□□□□□ -0.72
CDC42EP4-208ENST00000582303 FAM25CB3EWG5 89 aa10.57□□□□□ -0.72
CDC42EP4-208ENST00000582303 FAM25GB3EWG6 89 aa10.57□□□□□ -0.72
CDC42EP4-208ENST00000582303 M0QYG6 137 aa10.57□□□□□ -0.72
CDC42EP4-208ENST00000582303 GSTZ1O43708 216 aaPredicted RBP10.57□□□□□ -0.72
CDC42EP4-208ENST00000582303 TNFAIP8O95379 198 aa10.57□□□□□ -0.72
CDC42EP4-208ENST00000582303 P0C879 139 aa10.57□□□□□ -0.72
CDC42EP4-208ENST00000582303 NPY1RP25929 384 aa10.57□□□□□ -0.72
CDC42EP4-208ENST00000582303 RORCP51449 518 aa10.57□□□□□ -0.72
CDC42EP4-208ENST00000582303 SPCS3P61009 180 aa10.57□□□□□ -0.72
CDC42EP4-208ENST00000582303 PRR20EP86478 221 aa10.57□□□□□ -0.72
CDC42EP4-208ENST00000582303 PRR20CP86479 221 aa10.57□□□□□ -0.72
CDC42EP4-208ENST00000582303 PRR20DP86480 221 aa10.57□□□□□ -0.72
CDC42EP4-208ENST00000582303 PRR20BP86481 221 aa10.57□□□□□ -0.72
CDC42EP4-208ENST00000582303 PRR20AP86496 221 aa10.57□□□□□ -0.72
CDC42EP4-208ENST00000582303 DHRS2Q13268 280 aa10.57□□□□□ -0.72
CDC42EP4-208ENST00000582303 IZUMO4Q1ZYL8 232 aa10.57□□□□□ -0.72
CDC42EP4-208ENST00000582303 ACTL10Q5JWF8 245 aa10.57□□□□□ -0.72
CDC42EP4-208ENST00000582303 ETFRF1Q6IPR1 90 aa10.57□□□□□ -0.72
CDC42EP4-208ENST00000582303 NOXA1Q86UR1 476 aa10.57□□□□□ -0.72
CDC42EP4-208ENST00000582303 LHFPL1Q86WI0 220 aa10.57□□□□□ -0.72
CDC42EP4-208ENST00000582303 OR1S2Q8NGQ3 325 aa10.57□□□□□ -0.72
CDC42EP4-208ENST00000582303 OR52E5Q8NH55 327 aa10.57□□□□□ -0.72
CDC42EP4-208ENST00000582303 DCANP1Q8TF63 244 aa10.57□□□□□ -0.72
CDC42EP4-208ENST00000582303 TP53RKQ96S44 253 aa10.57□□□□□ -0.72
CDC42EP4-208ENST00000582303 KRTAP17-1Q9BYP8 105 aa10.57□□□□□ -0.72
CDC42EP4-208ENST00000582303 SEPSECSQ9HD40 501 aaKnown RBP10.57□□□□□ -0.72
CDC42EP4-208ENST00000582303 PFDN2Q9UHV9 154 aa10.57□□□□□ -0.72
CDC42EP4-208ENST00000582303 IGHV4-4A0A075B6R2 117 aa10.56□□□□□ -0.72
CDC42EP4-208ENST00000582303 HNRNPCP07910 306 aaKnown RBP eCLIP10.56□□□□□ -0.722e-6■■■■□ 20.4
CDC42EP4-208ENST00000582303 RBMY1A1P0DJD3 496 aaKnown RBP10.56□□□□□ -0.72
CDC42EP4-208ENST00000582303 RBMY1CP0DJD4 496 aa10.56□□□□□ -0.72
CDC42EP4-208ENST00000582303 P0DMU3 169 aa10.56□□□□□ -0.72
CDC42EP4-208ENST00000582303 FAM231AP0DMU4 169 aa10.56□□□□□ -0.72
CDC42EP4-208ENST00000582303 FAM231CP0DMU5 169 aa10.56□□□□□ -0.72
CDC42EP4-208ENST00000582303 ELK1P19419 428 aa10.56□□□□□ -0.72
CDC42EP4-208ENST00000582303 PI3P19957 117 aa10.56□□□□□ -0.72
CDC42EP4-208ENST00000582303 NUP62P37198 522 aaPredicted RBP10.56□□□□□ -0.72
CDC42EP4-208ENST00000582303 RBMY1FQ15415 496 aaKnown RBP10.56□□□□□ -0.72
CDC42EP4-208ENST00000582303 Q6ZTC4 211 aa10.56□□□□□ -0.72
CDC42EP4-208ENST00000582303 TERB2Q8NHR7 220 aa10.56□□□□□ -0.72
CDC42EP4-208ENST00000582303 RNASEH2CQ8TDP1 164 aaKnown RBP10.56□□□□□ -0.72
CDC42EP4-208ENST00000582303 HEYLQ9NQ87 328 aaPredicted RBP10.56□□□□□ -0.72
CDC42EP4-208ENST00000582303 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.56□□□□□ -0.72
CDC42EP4-208ENST00000582303 IGKV1-17P01599 117 aa10.55□□□□□ -0.72
CDC42EP4-208ENST00000582303 AMBPP02760 352 aa10.55□□□□□ -0.72
CDC42EP4-208ENST00000582303 GIG44P09565 113 aaPredicted RBP10.55□□□□□ -0.72
CDC42EP4-208ENST00000582303 UCP1P25874 307 aa10.55□□□□□ -0.72
CDC42EP4-208ENST00000582303 PPP5CP53041 499 aa10.55□□□□□ -0.72
CDC42EP4-208ENST00000582303 YPEL3P61236 119 aaPredicted RBP10.55□□□□□ -0.72
CDC42EP4-208ENST00000582303 BSXQ3C1V8 233 aa10.55□□□□□ -0.72
CDC42EP4-208ENST00000582303 PSMG4Q5JS54 123 aa10.55□□□□□ -0.72
CDC42EP4-208ENST00000582303 ABHD1Q96SE0 405 aa10.55□□□□□ -0.72
CDC42EP4-208ENST00000582303 FNDC4Q9H6D8 234 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms