RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 SMIM9A6NGZ8 99 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 OR4C46A6NHA9 309 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 HMSDA8MTL9 139 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 EVPLLA8MZ36 301 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 INMT-MINDY4F8WBC2 141 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 I3L521 148 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 FAAHO00519 579 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 SDCBPO00560 298 aaPredicted RBP0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 PDE6DO43924 150 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 OR7C1O76099 320 aaPredicted RBP0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 LYPLA2O95372 231 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 NSA2O95478 260 aaKnown RBP0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 SERPINE1P05121 402 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 C8GP07360 202 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 LGALS1P09382 135 aaKnown RBP0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 SMIM10L2AP0DMW4 78 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 SMIM10L2BP0DMW5 78 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 NEFHP12036 1026 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 CCL5P13501 91 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 S100A4P26447 101 aaKnown RBP0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 HSD11B1P28845 292 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 RPL28P46779 137 aaKnown RBP0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 REG1BP48304 166 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 YPEL3P61236 119 aaPredicted RBP0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 RANP62826 216 aaKnown RBP0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 HBA1P69905 142 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 POU6F1Q14863 301 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 ELOBQ15370 118 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 GUK1Q16774 197 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 SPANXN5Q5MJ07 72 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 LYRM7Q5U5X0 104 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 ALKAL1Q6UXT8 129 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 SLC36A1Q7Z2H8 476 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 TMED4Q7Z7H5 227 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 KTN1-AS1Q86SY8 53 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 ANKRD29Q8N6D5 301 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 ZNF676Q8N7Q3 588 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 OR51D1Q8NGF3 324 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 OR52L1Q8NGH7 329 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 OR51A2Q8NGJ7 313 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 GNPDA2Q8TDQ7 276 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 MBD3L1Q8WWY6 194 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 TMEM106AQ96A25 262 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 GPR146Q96CH1 333 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 IMMP2LQ96T52 175 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 TMEM70Q9BUB7 260 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 DERL1Q9BUN8 251 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 TMEM147Q9BVK8 224 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 PARD6GQ9BYG4 376 aaPredicted RBP0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 CST9LQ9H4G1 147 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 SLC39A9Q9NUM3 307 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 FBXL12Q9NXK8 326 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 TVP23BQ9NYZ1 205 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 GLI3P10071 1580 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 ALPK3Q96L96 1907 aa0.48□□□□□ -2.33
SMCHD1-206ENST00000581631 YTHDC2Q9H6S0 1430 aaKnown RBP0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 COL4A5P29400 1685 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 TTC21AQ8NDW8 1320 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 TANC2Q9HCD6 1990 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 TRPM1Q7Z4N2 1603 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 MYH1P12882 1939 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 ATG2AQ2TAZ0 1938 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 TRBV19A0A075B6N1 114 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 A0A087WUJ7 227 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 TGIF2-C20orf24A0A0A6YYL0 155 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 TRBV6-5A0A0K0K1A5 114 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 C7orf71A4D174 169 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 TRAPPC13A5PLN9 417 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 E5RI56 91 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 AIPO00170 330 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 GGCTO75223 188 aaKnown RBP0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 CNIH1O95406 144 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 HTR1AP08908 422 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 CST2P09228 141 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 TRGC1P0CF51 173 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 IL9P15248 144 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 GPX2P18283 190 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 RPS4Y1P22090 263 aaKnown RBP0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 HLA-DMBP28068 263 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 CASP1P29466 404 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 AKR1C3P42330 323 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 HSPE1P61604 102 aaKnown RBP0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 BASP1P80723 227 aaKnown RBP0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 KCNJ8Q15842 424 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 MOGQ16653 247 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 C12orf74Q32Q52 190 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 SCGB2B2Q4G0G5 96 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 AADACL3Q5VUY0 350 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 DPPA3Q6W0C5 159 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 MIR17HGQ75NE6 70 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 AAED1Q7RTV5 226 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 DHFR2Q86XF0 187 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 HIST3H2BBQ8N257 126 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 LINC00471Q8N535 108 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 PXT1Q8NFP0 134 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 OR11H6Q8NGC7 330 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 OR10X1Q8NGY0 326 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 H1FXQ92522 213 aaKnown RBP0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 ERMAPQ96PL5 475 aaPredicted RBP0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms