RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 RBMY1DP0C7P1 496 aaKnown RBP12.46□□□□□ -0.41
SREBF1-219ENST00000580540 HTR2BP41595 481 aa12.46□□□□□ -0.41
SREBF1-219ENST00000580540 TMEM116Q8NCL8 245 aa12.46□□□□□ -0.41
SREBF1-219ENST00000580540 SRRQ9GZT4 340 aa12.46□□□□□ -0.41
SREBF1-219ENST00000580540 SMPXQ9UHP9 88 aa12.46□□□□□ -0.41
SREBF1-219ENST00000580540 TRAV14DV4A0A0A6YYC5 116 aa12.45□□□□□ -0.42
SREBF1-219ENST00000580540 A0A0B4J2A0 478 aa12.45□□□□□ -0.42
SREBF1-219ENST00000580540 IGHV7-4-1A0A0J9YVY3 117 aa12.45□□□□□ -0.42
SREBF1-219ENST00000580540 LINC00854A0A1B0GVQ3 168 aa12.45□□□□□ -0.42
SREBF1-219ENST00000580540 TMEM50AO95807 157 aa12.45□□□□□ -0.42
SREBF1-219ENST00000580540 VAMP1P23763 118 aa12.45□□□□□ -0.42
SREBF1-219ENST00000580540 SRPXP78539 464 aa12.45□□□□□ -0.42
SREBF1-219ENST00000580540 AARDQ4LEZ3 155 aa12.45□□□□□ -0.42
SREBF1-219ENST00000580540 TRIQKQ629K1 86 aa12.45□□□□□ -0.42
SREBF1-219ENST00000580540 RHPN1-AS1Q9BWJ2 59 aa12.45□□□□□ -0.42
SREBF1-219ENST00000580540 HIPK2Q9H2X6 1198 aa12.45□□□□□ -0.42
SREBF1-219ENST00000580540 FNDC4Q9H6D8 234 aaPredicted RBP12.45□□□□□ -0.42
SREBF1-219ENST00000580540 MRPL36Q9P0J6 103 aaKnown RBP12.45□□□□□ -0.42
SREBF1-219ENST00000580540 UBQLN2Q9UHD9 624 aa12.45□□□□□ -0.42
SREBF1-219ENST00000580540 SHPKQ9UHJ6 478 aa12.45□□□□□ -0.42
SREBF1-219ENST00000580540 STAB2Q8WWQ8 2551 aa12.44□□□□□ -0.42
SREBF1-219ENST00000580540 TENM3Q9P273 2699 aa12.44□□□□□ -0.42
SREBF1-219ENST00000580540 CCR6P51684 374 aa12.44□□□□□ -0.42
SREBF1-219ENST00000580540 SMCO1Q147U7 214 aa12.44□□□□□ -0.42
SREBF1-219ENST00000580540 TMEM128Q5BJH2 165 aa12.44□□□□□ -0.42
SREBF1-219ENST00000580540 PVRIGQ6DKI7 326 aa12.44□□□□□ -0.42
SREBF1-219ENST00000580540 TOMM20LQ6UXN7 152 aa12.44□□□□□ -0.42
SREBF1-219ENST00000580540 ZNF600Q6ZNG1 722 aa12.44□□□□□ -0.42
SREBF1-219ENST00000580540 SLC24A4Q8NFF2 622 aa12.44□□□□□ -0.42
SREBF1-219ENST00000580540 OR1S1Q8NH92 325 aa12.44□□□□□ -0.42
SREBF1-219ENST00000580540 ZNF414Q96IQ9 312 aa12.44□□□□□ -0.42
SREBF1-219ENST00000580540 SPAG8Q99932 426 aaPredicted RBP12.44□□□□□ -0.42
SREBF1-219ENST00000580540 SLC25A21Q9BQT8 299 aaPredicted RBP12.44□□□□□ -0.42
SREBF1-219ENST00000580540 GINS3Q9BRX5 216 aa12.44□□□□□ -0.42
SREBF1-219ENST00000580540 RETNQ9HD89 108 aa12.44□□□□□ -0.42
SREBF1-219ENST00000580540 PUS1Q9Y606 427 aaKnown RBP eCLIP12.44□□□□□ -0.42
SREBF1-219ENST00000580540 IGKV3-7A0A075B6H7 116 aa12.43□□□□□ -0.42
SREBF1-219ENST00000580540 RPS10-NUDT3A0A1W2PQS6 291 aa12.43□□□□□ -0.42
SREBF1-219ENST00000580540 CHEK1O14757 476 aa12.43□□□□□ -0.42
SREBF1-219ENST00000580540 TSPAN4O14817 238 aa12.43□□□□□ -0.42
SREBF1-219ENST00000580540 CLN5O75503 358 aa12.43□□□□□ -0.42
SREBF1-219ENST00000580540 BAK1Q16611 211 aa12.43□□□□□ -0.42
SREBF1-219ENST00000580540 BSXQ3C1V8 233 aa12.43□□□□□ -0.42
SREBF1-219ENST00000580540 NMSQ5H8A3 153 aa12.43□□□□□ -0.42
SREBF1-219ENST00000580540 LINC00322Q6ZN03 302 aaPredicted RBP12.43□□□□□ -0.42
SREBF1-219ENST00000580540 OR10C1Q96KK4 312 aa12.43□□□□□ -0.42
SREBF1-219ENST00000580540 RNF2Q99496 336 aa12.43□□□□□ -0.42
SREBF1-219ENST00000580540 CACFD1Q9UGQ2 172 aa12.43□□□□□ -0.42
SREBF1-219ENST00000580540 IGHV3-66A0A0C4DH42 116 aa12.42□□□□□ -0.42
SREBF1-219ENST00000580540 SCGB2A1O75556 95 aa12.42□□□□□ -0.42
SREBF1-219ENST00000580540 IFNA10P01566 189 aa12.42□□□□□ -0.42
SREBF1-219ENST00000580540 TFPI2P48307 235 aa12.42□□□□□ -0.42
SREBF1-219ENST00000580540 TNFRSF9Q07011 255 aa12.42□□□□□ -0.42
SREBF1-219ENST00000580540 C2orf83Q53S99 150 aa12.42□□□□□ -0.42
SREBF1-219ENST00000580540 CENPSQ8N2Z9 138 aa12.42□□□□□ -0.42
SREBF1-219ENST00000580540 OR4X1Q8NH49 305 aa12.42□□□□□ -0.42
SREBF1-219ENST00000580540 DEDD2Q8WXF8 326 aa12.42□□□□□ -0.42
SREBF1-219ENST00000580540 FAM110AQ9BQ89 295 aa12.42□□□□□ -0.42
SREBF1-219ENST00000580540 RBKSQ9H477 322 aa12.42□□□□□ -0.42
SREBF1-219ENST00000580540 NDUFA13Q9P0J0 144 aa12.42□□□□□ -0.42
SREBF1-219ENST00000580540 PIGBOS1A0A0B4J2F0 54 aa12.41□□□□□ -0.42
SREBF1-219ENST00000580540 A0A1B0GU03 582 aa12.41□□□□□ -0.42
SREBF1-219ENST00000580540 OR4C46A6NHA9 309 aa12.41□□□□□ -0.42
SREBF1-219ENST00000580540 NPY1RP25929 384 aa12.41□□□□□ -0.42
SREBF1-219ENST00000580540 PPP1R1AQ13522 171 aa12.41□□□□□ -0.42
SREBF1-219ENST00000580540 TIGITQ495A1 244 aa12.41□□□□□ -0.42
SREBF1-219ENST00000580540 MUC7Q8TAX7 377 aa12.41□□□□□ -0.42
SREBF1-219ENST00000580540 DTD1Q8TEA8 209 aa12.41□□□□□ -0.42
SREBF1-219ENST00000580540 CITED4Q96RK1 184 aa12.41□□□□□ -0.42
SREBF1-219ENST00000580540 LOC102724200A0A096LPH7 203 aaPredicted RBP12.4□□□□□ -0.42
SREBF1-219ENST00000580540 C3orf84H3BNL1 204 aa12.4□□□□□ -0.42
SREBF1-219ENST00000580540 SFT2D2O95562 160 aa12.4□□□□□ -0.42
SREBF1-219ENST00000580540 APOHP02749 345 aaPredicted RBP12.4□□□□□ -0.42
SREBF1-219ENST00000580540 BMI1P35226 326 aa12.4□□□□□ -0.42
SREBF1-219ENST00000580540 RND2P52198 227 aa12.4□□□□□ -0.42
SREBF1-219ENST00000580540 RBMS2Q15434 407 aaKnown RBP12.4□□□□□ -0.42
SREBF1-219ENST00000580540 TCF24Q7RTU0 167 aa12.4□□□□□ -0.42
SREBF1-219ENST00000580540 NOXA1Q86UR1 476 aa12.4□□□□□ -0.42
SREBF1-219ENST00000580540 WFDC3Q8IUB2 231 aa12.4□□□□□ -0.42
SREBF1-219ENST00000580540 GBGT1Q8N5D6 347 aa12.4□□□□□ -0.42
SREBF1-219ENST00000580540 RNASEH2CQ8TDP1 164 aaKnown RBP12.4□□□□□ -0.42
SREBF1-219ENST00000580540 ST8SIA2Q92186 375 aa12.4□□□□□ -0.42
SREBF1-219ENST00000580540 GGTLC1Q9BX51 225 aa12.4□□□□□ -0.42
SREBF1-219ENST00000580540 ZFAND3Q9H8U3 227 aa12.4□□□□□ -0.42
SREBF1-219ENST00000580540 HSPB7Q9UBY9 170 aa12.4□□□□□ -0.42
SREBF1-219ENST00000580540 NBEAL2Q6ZNJ1 2754 aa12.39□□□□□ -0.43
SREBF1-219ENST00000580540 TRAV30A0A087WSZ9 112 aa12.39□□□□□ -0.43
SREBF1-219ENST00000580540 DUXBA0A1W2PPF3 345 aa12.39□□□□□ -0.43
SREBF1-219ENST00000580540 NAP1L6A6NFF2 107 aa12.39□□□□□ -0.43
SREBF1-219ENST00000580540 HOXB5P09067 269 aa12.39□□□□□ -0.43
SREBF1-219ENST00000580540 SLC25A4P12235 298 aa12.39□□□□□ -0.43
SREBF1-219ENST00000580540 NPPCP23582 126 aa12.39□□□□□ -0.43
SREBF1-219ENST00000580540 RPL11P62913 178 aaKnown RBP12.39□□□□□ -0.43
SREBF1-219ENST00000580540 ETFRF1Q6IPR1 90 aa12.39□□□□□ -0.43
SREBF1-219ENST00000580540 PRSS54Q6PEW0 395 aa12.39□□□□□ -0.43
SREBF1-219ENST00000580540 TMEM170AQ8WVE7 144 aa12.39□□□□□ -0.43
SREBF1-219ENST00000580540 ACY3Q96HD9 319 aa12.39□□□□□ -0.43
SREBF1-219ENST00000580540 U3KQ87 197 aa12.39□□□□□ -0.43
SREBF1-219ENST00000580540 CENPXA8MT69 81 aa12.38□□□□□ -0.43
SREBF1-219ENST00000580540 IFNA4P05014 189 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms