RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 ARTNQ5T4W7 220 aa8.4□□□□□ -1.06
MSI2-209ENST00000579483 LCN12Q6JVE5 192 aa8.4□□□□□ -1.06
MSI2-209ENST00000579483 IGLV3-9A0A075B6K5 115 aa8.4□□□□□ -1.07
MSI2-209ENST00000579483 IGKV1-12A0A0C4DH73 117 aa8.4□□□□□ -1.07
MSI2-209ENST00000579483 LY6HO94772 140 aa8.4□□□□□ -1.07
MSI2-209ENST00000579483 IGKV1D-12P01611 117 aa8.4□□□□□ -1.07
MSI2-209ENST00000579483 EMP1P54849 157 aa8.4□□□□□ -1.07
MSI2-209ENST00000579483 C2orf83Q53S99 150 aa8.4□□□□□ -1.07
MSI2-209ENST00000579483 GSX1Q9H4S2 264 aaPredicted RBP8.4□□□□□ -1.07
MSI2-209ENST00000579483 PEF1Q9UBV8 284 aaKnown RBP8.4□□□□□ -1.07
MSI2-209ENST00000579483 TRAV21A0A0B4J279 112 aa8.39□□□□□ -1.07
MSI2-209ENST00000579483 PRB1P04280 392 aa8.39□□□□□ -1.07
MSI2-209ENST00000579483 NAT1P18440 290 aa8.39□□□□□ -1.07
MSI2-209ENST00000579483 WT1P19544 449 aaPredicted RBP8.39□□□□□ -1.07
MSI2-209ENST00000579483 CRYBB3P26998 211 aa8.39□□□□□ -1.07
MSI2-209ENST00000579483 SIGLEC15Q6ZMC9 328 aa8.39□□□□□ -1.07
MSI2-209ENST00000579483 LRTM2Q8N967 370 aa8.39□□□□□ -1.07
MSI2-209ENST00000579483 SGMS2Q8NHU3 365 aa8.39□□□□□ -1.07
MSI2-209ENST00000579483 SGK494Q96LW2 274 aa8.39□□□□□ -1.07
MSI2-209ENST00000579483 VAMP8Q9BV40 100 aa8.39□□□□□ -1.07
MSI2-209ENST00000579483 IER3P46695 156 aa8.39□□□□□ -1.07
MSI2-209ENST00000579483 ERVK11-1P61568 191 aa8.39□□□□□ -1.07
MSI2-209ENST00000579483 PRB3Q04118 309 aaPredicted RBP8.39□□□□□ -1.07
MSI2-209ENST00000579483 ZNF383Q8NA42 475 aa8.39□□□□□ -1.07
MSI2-209ENST00000579483 A0A1B0GW15 77 aa8.39□□□□□ -1.07
MSI2-209ENST00000579483 LYPD2Q6UXB3 125 aa8.39□□□□□ -1.07
MSI2-209ENST00000579483 C1orf122Q6ZSJ8 110 aa8.39□□□□□ -1.07
MSI2-209ENST00000579483 ROS1P08922 2347 aa8.39□□□□□ -1.07
MSI2-209ENST00000579483 C2orf68Q2NKX9 166 aa8.39□□□□□ -1.07
MSI2-209ENST00000579483 H0YJW9 148 aa8.38□□□□□ -1.07
MSI2-209ENST00000579483 TMEM250H0YL14 139 aa8.38□□□□□ -1.07
MSI2-209ENST00000579483 RPL29P47914 159 aaKnown RBP8.38□□□□□ -1.07
MSI2-209ENST00000579483 FOXL1Q12952 345 aa8.38□□□□□ -1.07
MSI2-209ENST00000579483 AWAT1Q58HT5 328 aa8.38□□□□□ -1.07
MSI2-209ENST00000579483 LAIR2Q6ISS4 152 aa8.38□□□□□ -1.07
MSI2-209ENST00000579483 ZNF841Q6ZN19 808 aa8.38□□□□□ -1.07
MSI2-209ENST00000579483 C9orf62Q8N4C0 152 aa8.38□□□□□ -1.07
MSI2-209ENST00000579483 CLRN3Q8NCR9 226 aa8.38□□□□□ -1.07
MSI2-209ENST00000579483 CIRBPQ14011 172 aaKnown RBP8.38□□□□□ -1.07
MSI2-209ENST00000579483 C2CD4CQ8TF44 421 aa8.38□□□□□ -1.07
MSI2-209ENST00000579483 GEMIN7Q9H840 131 aaKnown RBP8.38□□□□□ -1.07
MSI2-209ENST00000579483 LINC00527Q9UJ94 153 aa8.38□□□□□ -1.07
MSI2-209ENST00000579483 A0A1B0GWJ7 208 aa8.38□□□□□ -1.07
MSI2-209ENST00000579483 J3QR89 54 aa8.38□□□□□ -1.07
MSI2-209ENST00000579483 NAPSAO96009 420 aa8.38□□□□□ -1.07
MSI2-209ENST00000579483 AMBPP02760 352 aa8.38□□□□□ -1.07
MSI2-209ENST00000579483 TMEM88Q6PEY1 159 aa8.38□□□□□ -1.07
MSI2-209ENST00000579483 IFT22Q9H7X7 185 aa8.38□□□□□ -1.07
MSI2-209ENST00000579483 TRGV4A0A0C4DH28 118 aa8.38□□□□□ -1.07
MSI2-209ENST00000579483 NUDT3O95989 172 aa8.38□□□□□ -1.07
MSI2-209ENST00000579483 FAM3BP58499 235 aaPredicted RBP8.38□□□□□ -1.07
MSI2-209ENST00000579483 C9orf139Q6ZV77 190 aa8.38□□□□□ -1.07
MSI2-209ENST00000579483 FAM24BQ8N5W8 94 aa8.38□□□□□ -1.07
MSI2-209ENST00000579483 ALKBH7Q9BT30 221 aaPredicted RBP8.38□□□□□ -1.07
MSI2-209ENST00000579483 IGKV1D-13A0A0B4J2D9 117 aa8.37□□□□□ -1.07
MSI2-209ENST00000579483 FABP5P3A8MUU1 101 aa8.37□□□□□ -1.07
MSI2-209ENST00000579483 H3BTX0 84 aa8.37□□□□□ -1.07
MSI2-209ENST00000579483 IGKV1-13P0DP09 117 aa8.37□□□□□ -1.07
MSI2-209ENST00000579483 RNASE4P34096 147 aaKnown RBP8.37□□□□□ -1.07
MSI2-209ENST00000579483 TEX36Q5VZQ5 186 aa8.37□□□□□ -1.07
MSI2-209ENST00000579483 RTBDNQ9BSG5 229 aaPredicted RBP8.37□□□□□ -1.07
MSI2-209ENST00000579483 SIGLEC9Q9Y336 463 aa8.37□□□□□ -1.07
MSI2-209ENST00000579483 CRXO43186 299 aaPredicted RBP8.37□□□□□ -1.07
MSI2-209ENST00000579483 ZNF324O75467 553 aaPredicted RBP8.37□□□□□ -1.07
MSI2-209ENST00000579483 Q6P435 159 aa8.37□□□□□ -1.07
MSI2-209ENST00000579483 ZNF562Q6V9R5 426 aa8.37□□□□□ -1.07
MSI2-209ENST00000579483 FAM208BQ5VWN6 2430 aa8.37□□□□□ -1.07
MSI2-209ENST00000579483 CD8AP01732 235 aa8.37□□□□□ -1.07
MSI2-209ENST00000579483 TAS2R60P59551 318 aa8.37□□□□□ -1.07
MSI2-209ENST00000579483 Q6ZS49 121 aa8.37□□□□□ -1.07
MSI2-209ENST00000579483 KAAG1Q9UBP8 84 aa8.37□□□□□ -1.07
MSI2-209ENST00000579483 PIEZO1Q92508 2521 aa8.37□□□□□ -1.07
MSI2-209ENST00000579483 LINC01619G3V211 115 aa8.37□□□□□ -1.07
MSI2-209ENST00000579483 M0R3E3 92 aa8.37□□□□□ -1.07
MSI2-209ENST00000579483 PEX7O00628 323 aa8.37□□□□□ -1.07
MSI2-209ENST00000579483 TFF1P04155 84 aa8.37□□□□□ -1.07
MSI2-209ENST00000579483 BTF3P20290 206 aaKnown RBP8.37□□□□□ -1.07
MSI2-209ENST00000579483 PSMG4Q5JS54 123 aa8.37□□□□□ -1.07
MSI2-209ENST00000579483 CACNA1DQ01668 2161 aa8.37□□□□□ -1.07
MSI2-209ENST00000579483 FGF16O43320 207 aa8.36□□□□□ -1.07
MSI2-209ENST00000579483 PRSS2P07478 247 aa8.36□□□□□ -1.07
MSI2-209ENST00000579483 EFNB1P98172 346 aa8.36□□□□□ -1.07
MSI2-209ENST00000579483 OR1N2Q8NGR9 330 aa8.36□□□□□ -1.07
MSI2-209ENST00000579483 SOX21Q9Y651 276 aaPredicted RBP8.36□□□□□ -1.07
MSI2-209ENST00000579483 USF3Q68DE3 2245 aa8.36□□□□□ -1.07
MSI2-209ENST00000579483 PTPRDP23468 1912 aa8.36□□□□□ -1.07
MSI2-209ENST00000579483 HEATR1Q9H583 2144 aaKnown RBP8.36□□□□□ -1.07
MSI2-209ENST00000579483 VGLL1Q99990 258 aa8.36□□□□□ -1.07
MSI2-209ENST00000579483 MRPS16Q9Y3D3 137 aaKnown RBP8.36□□□□□ -1.07
MSI2-209ENST00000579483 TOMM20LQ6UXN7 152 aa8.36□□□□□ -1.07
MSI2-209ENST00000579483 SPRY4Q9C004 299 aa8.36□□□□□ -1.07
MSI2-209ENST00000579483 Q9H3A6 140 aa8.36□□□□□ -1.07
MSI2-209ENST00000579483 F11RQ9Y624 299 aaKnown RBP8.36□□□□□ -1.07
MSI2-209ENST00000579483 LTBP2Q14767 1821 aa8.36□□□□□ -1.07
MSI2-209ENST00000579483 IGKV1-27A0A075B6S5 117 aa8.36□□□□□ -1.07
MSI2-209ENST00000579483 C7orf77A4D0Y5 90 aa8.36□□□□□ -1.07
MSI2-209ENST00000579483 PRR32B1ATL7 298 aa8.36□□□□□ -1.07
MSI2-209ENST00000579483 ELANEP08246 267 aa8.36□□□□□ -1.07
MSI2-209ENST00000579483 SRSF9Q13242 221 aaKnown RBP eCLIP8.36□□□□□ -1.07
MSI2-209ENST00000579483 TMEM183BQ1AE95 376 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms