RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 TMEM95Q3KNT9 176 aa10.28□□□□□ -0.76
CTC1-203ENST00000578240 EIF5AL1Q6IS14 154 aaKnown RBP10.28□□□□□ -0.76
CTC1-203ENST00000578240 TMEM144Q7Z5S9 345 aa10.28□□□□□ -0.76
CTC1-203ENST00000578240 SCGB1C1Q8TD33 95 aa10.28□□□□□ -0.76
CTC1-203ENST00000578240 RNF141Q8WVD5 230 aa10.28□□□□□ -0.76
CTC1-203ENST00000578240 CACNG8Q8WXS5 425 aa10.28□□□□□ -0.76
CTC1-203ENST00000578240 NPVFQ9HCQ7 196 aa10.28□□□□□ -0.76
CTC1-203ENST00000578240 LINC00527Q9UJ94 153 aa10.28□□□□□ -0.76
CTC1-203ENST00000578240 NIPBLQ6KC79 2804 aaeCLIP10.27□□□□□ -0.77
CTC1-203ENST00000578240 F8W735 103 aaPredicted RBP10.27□□□□□ -0.77
CTC1-203ENST00000578240 AGPAT2O15120 278 aa10.27□□□□□ -0.77
CTC1-203ENST00000578240 MPDU1O75352 247 aa10.27□□□□□ -0.77
CTC1-203ENST00000578240 YIF1AO95070 293 aa10.27□□□□□ -0.77
CTC1-203ENST00000578240 IGF1P05019 195 aa10.27□□□□□ -0.77
CTC1-203ENST00000578240 RND2P52198 227 aa10.27□□□□□ -0.77
CTC1-203ENST00000578240 ZNF726P1Q15940 193 aa10.27□□□□□ -0.77
CTC1-203ENST00000578240 TEPPQ6URK8 271 aa10.27□□□□□ -0.77
CTC1-203ENST00000578240 UNQ5815/PRO19632Q6UWF5 114 aa10.27□□□□□ -0.77
CTC1-203ENST00000578240 Q6ZRG5 221 aa10.27□□□□□ -0.77
CTC1-203ENST00000578240 THAP8Q8NA92 274 aa10.27□□□□□ -0.77
CTC1-203ENST00000578240 OR5T1Q8NG75 326 aa10.27□□□□□ -0.77
CTC1-203ENST00000578240 DUX5Q96PT3 197 aa10.27□□□□□ -0.77
CTC1-203ENST00000578240 TMEM160Q9NX00 188 aa10.27□□□□□ -0.77
CTC1-203ENST00000578240 LINC00862A6NCI5 91 aa10.26□□□□□ -0.77
CTC1-203ENST00000578240 MFSD2BA6NFX1 497 aa10.26□□□□□ -0.77
CTC1-203ENST00000578240 ZNF705EA8MWA4 302 aaPredicted RBP10.26□□□□□ -0.77
CTC1-203ENST00000578240 CORTO00230 105 aa10.26□□□□□ -0.77
CTC1-203ENST00000578240 ELLP55199 621 aaPredicted RBP10.26□□□□□ -0.77
CTC1-203ENST00000578240 RAB2AP61019 212 aa10.26□□□□□ -0.77
CTC1-203ENST00000578240 PRR20EP86478 221 aa10.26□□□□□ -0.77
CTC1-203ENST00000578240 PRR20CP86479 221 aa10.26□□□□□ -0.77
CTC1-203ENST00000578240 PRR20DP86480 221 aa10.26□□□□□ -0.77
CTC1-203ENST00000578240 PRR20BP86481 221 aa10.26□□□□□ -0.77
CTC1-203ENST00000578240 PRR20AP86496 221 aa10.26□□□□□ -0.77
CTC1-203ENST00000578240 AKIRIN2Q53H80 203 aa10.26□□□□□ -0.77
CTC1-203ENST00000578240 GCSAMLQ5JQS6 135 aa10.26□□□□□ -0.77
CTC1-203ENST00000578240 C9orf152Q5JTZ5 239 aa10.26□□□□□ -0.77
CTC1-203ENST00000578240 PXDC1Q5TGL8 231 aa10.26□□□□□ -0.77
CTC1-203ENST00000578240 MIC13Q5XKP0 118 aa10.26□□□□□ -0.77
CTC1-203ENST00000578240 TMEM116Q8NCL8 245 aa10.26□□□□□ -0.77
CTC1-203ENST00000578240 ACY3Q96HD9 319 aa10.26□□□□□ -0.77
CTC1-203ENST00000578240 SLC35E1Q96K37 410 aa10.26□□□□□ -0.77
CTC1-203ENST00000578240 NOL4LQ96MY1 436 aaPredicted RBP10.26□□□□□ -0.77
CTC1-203ENST00000578240 ESM1Q9NQ30 184 aa10.26□□□□□ -0.77
CTC1-203ENST00000578240 RPRMQ9NS64 109 aa10.26□□□□□ -0.77
CTC1-203ENST00000578240 LINC00869P0C866 280 aa10.25□□□□□ -0.77
CTC1-203ENST00000578240 CAMLGP49069 296 aa10.25□□□□□ -0.77
CTC1-203ENST00000578240 CFHR3Q02985 330 aa10.25□□□□□ -0.77
CTC1-203ENST00000578240 SLC35E3Q7Z769 313 aa10.25□□□□□ -0.77
CTC1-203ENST00000578240 LYPD6BQ8NI32 183 aa10.25□□□□□ -0.77
CTC1-203ENST00000578240 NPIPB3Q92617 1050 aa10.25□□□□□ -0.77
CTC1-203ENST00000578240 SLC45A2Q9UMX9 530 aa10.25□□□□□ -0.77
CTC1-203ENST00000578240 S4R3C0 116 aa10.25□□□□□ -0.77
CTC1-203ENST00000578240 TRBV9A0A0B4J1U6 114 aa10.25□□□□□ -0.77
CTC1-203ENST00000578240 TRAV41A0A0B4J266 112 aa10.25□□□□□ -0.77
CTC1-203ENST00000578240 DNAJC9-AS1A6NH13 148 aa10.25□□□□□ -0.77
CTC1-203ENST00000578240 UMAD1C9J7I0 102 aa10.25□□□□□ -0.77
CTC1-203ENST00000578240 EIF3GO75821 320 aaKnown RBP eCLIP10.25□□□□□ -0.77
CTC1-203ENST00000578240 GATA2P23769 480 aaPredicted RBP10.25□□□□□ -0.77
CTC1-203ENST00000578240 PPIFP30405 207 aaKnown RBP10.25□□□□□ -0.77
CTC1-203ENST00000578240 OR10J1P30954 320 aa10.25□□□□□ -0.77
CTC1-203ENST00000578240 SRP14P37108 136 aaKnown RBP10.25□□□□□ -0.77
CTC1-203ENST00000578240 SERF2P84101 59 aa10.25□□□□□ -0.77
CTC1-203ENST00000578240 RPP25LQ8N5L8 163 aaKnown RBP10.25□□□□□ -0.77
CTC1-203ENST00000578240 STPG3Q8N7X2 389 aa10.25□□□□□ -0.77
CTC1-203ENST00000578240 FAM213BQ8TBF2 198 aa10.25□□□□□ -0.77
CTC1-203ENST00000578240 SAT2Q96F10 170 aaPredicted RBP10.25□□□□□ -0.77
CTC1-203ENST00000578240 ZNF414Q96IQ9 312 aa10.25□□□□□ -0.77
CTC1-203ENST00000578240 ZNF702PQ9H963 129 aa10.25□□□□□ -0.77
CTC1-203ENST00000578240 PXMP4Q9Y6I8 212 aa10.25□□□□□ -0.77
CTC1-203ENST00000578240 PSMB11A5LHX3 300 aa10.24□□□□□ -0.77
CTC1-203ENST00000578240 BTBD17A6NE02 478 aa10.24□□□□□ -0.77
CTC1-203ENST00000578240 TRIM77I1YAP6 450 aa10.24□□□□□ -0.77
CTC1-203ENST00000578240 OR2J3O76001 311 aa10.24□□□□□ -0.77
CTC1-203ENST00000578240 NDUFB8O95169 186 aa10.24□□□□□ -0.77
CTC1-203ENST00000578240 RAB14P61106 215 aa10.24□□□□□ -0.77
CTC1-203ENST00000578240 ZNF90Q03938 601 aa10.24□□□□□ -0.77
CTC1-203ENST00000578240 TMEM41BQ5BJD5 291 aa10.24□□□□□ -0.77
CTC1-203ENST00000578240 FFAR4Q5NUL3 377 aa10.24□□□□□ -0.77
CTC1-203ENST00000578240 OR1L6Q8NGR2 347 aa10.24□□□□□ -0.77
CTC1-203ENST00000578240 LRRC20Q8TCA0 184 aa10.24□□□□□ -0.77
CTC1-203ENST00000578240 RCC1LQ96I51 464 aaKnown RBP10.24□□□□□ -0.77
CTC1-203ENST00000578240 ZNF580Q9UK33 172 aa10.24□□□□□ -0.77
CTC1-203ENST00000578240 ATP6V1G1O75348 118 aa10.23□□□□□ -0.77
CTC1-203ENST00000578240 IGLC1P0CG04 106 aa10.23□□□□□ -0.77
CTC1-203ENST00000578240 RPL29P47914 159 aaKnown RBP10.23□□□□□ -0.77
CTC1-203ENST00000578240 RAB5CP51148 216 aa10.23□□□□□ -0.77
CTC1-203ENST00000578240 AKR1C8PQ5T2L2 129 aa10.23□□□□□ -0.77
CTC1-203ENST00000578240 SPSB3Q6PJ21 355 aa10.23□□□□□ -0.77
CTC1-203ENST00000578240 OR4X1Q8NH49 305 aa10.23□□□□□ -0.77
CTC1-203ENST00000578240 TMEM68Q96MH6 324 aa10.23□□□□□ -0.77
CTC1-203ENST00000578240 MED9Q9NWA0 146 aa10.23□□□□□ -0.77
CTC1-203ENST00000578240 TCRBV4S1A1TA0A5B7 111 aa10.22□□□□□ -0.77
CTC1-203ENST00000578240 C17orf112F2Z3M2 114 aa10.22□□□□□ -0.77
CTC1-203ENST00000578240 CRLF1O75462 422 aa10.22□□□□□ -0.77
CTC1-203ENST00000578240 IGKV1-17P01599 117 aa10.22□□□□□ -0.77
CTC1-203ENST00000578240 B2MP61769 119 aa10.22□□□□□ -0.77
CTC1-203ENST00000578240 ZNF616Q08AN1 781 aa10.22□□□□□ -0.77
CTC1-203ENST00000578240 ETFRF1Q6IPR1 90 aa10.22□□□□□ -0.77
CTC1-203ENST00000578240 TMEM86BQ8N661 226 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms