RNA–Protein interactions for RNA: ENST00000577967.1

NF1-218, Transcript of neurofibromin 1, humanhuman

Gene NF1, Length 5,799 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-218ENST00000577967 TMEM144Q7Z5S9 345 aa3.79□□□□□ -1.8
NF1-218ENST00000577967 C11orf44Q8N8P7 122 aa3.79□□□□□ -1.8
NF1-218ENST00000577967 HIST1H2BAQ96A08 127 aa3.79□□□□□ -1.8
NF1-218ENST00000577967 CARHSP1Q9Y2V2 147 aaKnown RBP3.79□□□□□ -1.8
NF1-218ENST00000577967 MOB4Q9Y3A3 225 aa3.79□□□□□ -1.8
NF1-218ENST00000577967 COL4A2P08572 1712 aa3.79□□□□□ -1.8
NF1-218ENST00000577967 PF4P02776 101 aa3.78□□□□□ -1.8
NF1-218ENST00000577967 AMTP48728 403 aa3.78□□□□□ -1.8
NF1-218ENST00000577967 NSUN5P1Q3KNT7 163 aa3.78□□□□□ -1.8
NF1-218ENST00000577967 KIAA1644Q3SXP7 199 aa3.78□□□□□ -1.8
NF1-218ENST00000577967 MAP1LC3CQ9BXW4 147 aa3.78□□□□□ -1.8
NF1-218ENST00000577967 GRIFINA4D1Z8 144 aa3.78□□□□□ -1.8
NF1-218ENST00000577967 TMEM155Q4W5P6 130 aa3.78□□□□□ -1.8
NF1-218ENST00000577967 ZNF841Q6ZN19 808 aa3.78□□□□□ -1.8
NF1-218ENST00000577967 LINC01356Q8N9X3 169 aa3.78□□□□□ -1.8
NF1-218ENST00000577967 TXNDC17Q9BRA2 123 aa3.78□□□□□ -1.8
NF1-218ENST00000577967 PGPEP1LA6NFU8 196 aa3.78□□□□□ -1.8
NF1-218ENST00000577967 CCKARP32238 428 aa3.78□□□□□ -1.8
NF1-218ENST00000577967 SAA4P35542 130 aa3.78□□□□□ -1.8
NF1-218ENST00000577967 RPL15P61313 204 aaKnown RBP3.78□□□□□ -1.8
NF1-218ENST00000577967 C2orf83Q53S99 150 aa3.78□□□□□ -1.8
NF1-218ENST00000577967 TMEM97Q5BJF2 176 aa3.78□□□□□ -1.8
NF1-218ENST00000577967 TMEM116Q8NCL8 245 aa3.78□□□□□ -1.8
NF1-218ENST00000577967 ASCL2Q99929 193 aa3.78□□□□□ -1.8
NF1-218ENST00000577967 RNASE7Q9H1E1 156 aaKnown RBP3.78□□□□□ -1.8
NF1-218ENST00000577967 SDF2L1Q9HCN8 221 aa3.78□□□□□ -1.8
NF1-218ENST00000577967 PHF3Q92576 2039 aaKnown RBP3.78□□□□□ -1.8
NF1-218ENST00000577967 A8MWL6 223 aa3.78□□□□□ -1.8
NF1-218ENST00000577967 C10orf142B7Z368 130 aa3.78□□□□□ -1.8
NF1-218ENST00000577967 IGKV1-39P01597 117 aa3.78□□□□□ -1.8
NF1-218ENST00000577967 IGKV1D-39P04432 117 aa3.78□□□□□ -1.8
NF1-218ENST00000577967 PRR31Q5SQ13 230 aa3.78□□□□□ -1.8
NF1-218ENST00000577967 RNF125Q96EQ8 232 aa3.78□□□□□ -1.8
NF1-218ENST00000577967 Q96MF0 132 aa3.78□□□□□ -1.8
NF1-218ENST00000577967 IMMP2LQ96T52 175 aa3.78□□□□□ -1.8
NF1-218ENST00000577967 FER1L5A0AVI2 2057 aa3.78□□□□□ -1.81
NF1-218ENST00000577967 IGLV3-9A0A075B6K5 115 aa3.78□□□□□ -1.81
NF1-218ENST00000577967 C15orf62A8K5M9 175 aa3.78□□□□□ -1.81
NF1-218ENST00000577967 H3BUX3 64 aa3.78□□□□□ -1.81
NF1-218ENST00000577967 PRSS1P07477 247 aa3.78□□□□□ -1.81
NF1-218ENST00000577967 LOXP28300 417 aaPredicted RBP3.78□□□□□ -1.81
NF1-218ENST00000577967 HNRNPA3P51991 378 aaKnown RBP3.78□□□□□ -1.81
NF1-218ENST00000577967 MINOS1Q5TGZ0 78 aa3.78□□□□□ -1.81
NF1-218ENST00000577967 OR1P1Q8NH06 330 aa3.78□□□□□ -1.81
NF1-218ENST00000577967 C8orf46Q8TAG6 207 aa3.78□□□□□ -1.81
NF1-218ENST00000577967 TMEM167AQ8TBQ9 72 aa3.78□□□□□ -1.81
NF1-218ENST00000577967 GGTLC1Q9BX51 225 aa3.78□□□□□ -1.81
NF1-218ENST00000577967 REG4Q9BYZ8 158 aa3.78□□□□□ -1.81
NF1-218ENST00000577967 PRSS22Q9GZN4 317 aa3.78□□□□□ -1.81
NF1-218ENST00000577967 OTORQ9NRC9 128 aa3.78□□□□□ -1.81
NF1-218ENST00000577967 ZNF257Q9Y2Q1 563 aa3.78□□□□□ -1.81
NF1-218ENST00000577967 SIGLEC9Q9Y336 463 aa3.78□□□□□ -1.81
NF1-218ENST00000577967 YTHDF2Q9Y5A9 579 aaKnown RBP3.78□□□□□ -1.81
NF1-218ENST00000577967 MINOS1-NBL1R4GNA1 71 aa3.78□□□□□ -1.81
NF1-218ENST00000577967 CACNA1IQ9P0X4 2223 aa3.77□□□□□ -1.81
NF1-218ENST00000577967 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.77□□□□□ -1.81
NF1-218ENST00000577967 TCAPO15273 167 aa3.77□□□□□ -1.81
NF1-218ENST00000577967 SOD3P08294 240 aa3.77□□□□□ -1.81
NF1-218ENST00000577967 CD99P14209 185 aa3.77□□□□□ -1.81
NF1-218ENST00000577967 SNRPD3P62318 126 aaKnown RBP3.77□□□□□ -1.81
NF1-218ENST00000577967 RPL23P62829 140 aaKnown RBP3.77□□□□□ -1.81
NF1-218ENST00000577967 SYT8Q8NBV8 401 aa3.77□□□□□ -1.81
NF1-218ENST00000577967 VN1R17PQ8TDU5 208 aa3.77□□□□□ -1.81
NF1-218ENST00000577967 SCRT1Q9BWW7 348 aa3.77□□□□□ -1.81
NF1-218ENST00000577967 SEPSECSQ9HD40 501 aaKnown RBP3.77□□□□□ -1.81
NF1-218ENST00000577967 IL36BQ9NZH7 164 aa3.77□□□□□ -1.81
NF1-218ENST00000577967 A0A0G2JLM5 398 aa3.77□□□□□ -1.81
NF1-218ENST00000577967 B4DSR2 109 aa3.77□□□□□ -1.81
NF1-218ENST00000577967 TRGC1P0CF51 173 aa3.77□□□□□ -1.81
NF1-218ENST00000577967 AREGP15514 252 aa3.77□□□□□ -1.81
NF1-218ENST00000577967 CBLN1P23435 193 aa3.77□□□□□ -1.81
NF1-218ENST00000577967 TMEM183BQ1AE95 376 aa3.77□□□□□ -1.81
NF1-218ENST00000577967 SMUG1Q53HV7 270 aa3.77□□□□□ -1.81
NF1-218ENST00000577967 PVRIGQ6DKI7 326 aa3.77□□□□□ -1.81
NF1-218ENST00000577967 TMEM14EPQ6UXP3 125 aa3.77□□□□□ -1.81
NF1-218ENST00000577967 TCF23Q7RTU1 214 aa3.77□□□□□ -1.81
NF1-218ENST00000577967 ITLN2Q8WWU7 325 aaPredicted RBP3.77□□□□□ -1.81
NF1-218ENST00000577967 TPSG1Q9NRR2 321 aa3.77□□□□□ -1.81
NF1-218ENST00000577967 TRIOBPQ9H2D6 2365 aa3.77□□□□□ -1.81
NF1-218ENST00000577967 IGHV2-70DA0A0C4DH43 119 aa3.77□□□□□ -1.81
NF1-218ENST00000577967 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.77□□□□□ -1.81
NF1-218ENST00000577967 HOXB4P17483 251 aaPredicted RBP3.77□□□□□ -1.81
NF1-218ENST00000577967 BTF3P20290 206 aaKnown RBP3.77□□□□□ -1.81
NF1-218ENST00000577967 SRIP30626 198 aa3.77□□□□□ -1.81
NF1-218ENST00000577967 NDPQ00604 133 aa3.77□□□□□ -1.81
NF1-218ENST00000577967 C15orf32Q32M92 178 aa3.77□□□□□ -1.81
NF1-218ENST00000577967 IGFL4Q6B9Z1 124 aa3.77□□□□□ -1.81
NF1-218ENST00000577967 C19orf35Q6ZS72 473 aa3.77□□□□□ -1.81
NF1-218ENST00000577967 C1QL4Q86Z23 238 aa3.77□□□□□ -1.81
NF1-218ENST00000577967 Q8NA96 180 aa3.77□□□□□ -1.81
NF1-218ENST00000577967 OR4X2Q8NGF9 303 aa3.77□□□□□ -1.81
NF1-218ENST00000577967 MARVELD3Q96A59 401 aa3.77□□□□□ -1.81
NF1-218ENST00000577967 RAX2Q96IS3 184 aa3.77□□□□□ -1.81
NF1-218ENST00000577967 TBL2Q9Y4P3 447 aaKnown RBP3.77□□□□□ -1.81
NF1-218ENST00000577967 PHLDA3Q9Y5J5 127 aa3.77□□□□□ -1.81
NF1-218ENST00000577967 NDUFS7O75251 213 aa3.77□□□□□ -1.81
NF1-218ENST00000577967 PSG1P11464 419 aa3.77□□□□□ -1.81
NF1-218ENST00000577967 CKS2P33552 79 aa3.77□□□□□ -1.81
NF1-218ENST00000577967 PTTG1IPP53801 180 aa3.77□□□□□ -1.81
NF1-218ENST00000577967 Q5PR19 223 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms