RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 HIPK2Q9H2X6 1198 aa12.09□□□□□ -0.47
VAPA-204ENST00000577901 TECRQ9NZ01 308 aaKnown RBP12.09□□□□□ -0.47
VAPA-204ENST00000577901 UFC1Q9Y3C8 167 aa12.09□□□□□ -0.47
VAPA-204ENST00000577901 IGHV3-35A0A0C4DH35 117 aa12.08□□□□□ -0.48
VAPA-204ENST00000577901 A0A1B0GU03 582 aa12.08□□□□□ -0.48
VAPA-204ENST00000577901 A8MWP6 167 aa12.08□□□□□ -0.48
VAPA-204ENST00000577901 RNASE2P10153 161 aaKnown RBP12.08□□□□□ -0.48
VAPA-204ENST00000577901 FCGR2BP31994 310 aaPredicted RBP12.08□□□□□ -0.48
VAPA-204ENST00000577901 ELLP55199 621 aaPredicted RBP12.08□□□□□ -0.48
VAPA-204ENST00000577901 PPP1R1AQ13522 171 aa12.08□□□□□ -0.48
VAPA-204ENST00000577901 LRTM2Q8N967 370 aa12.08□□□□□ -0.48
VAPA-204ENST00000577901 DUSP18Q8NEJ0 188 aa12.08□□□□□ -0.48
VAPA-204ENST00000577901 MARC2Q969Z3 335 aa12.08□□□□□ -0.48
VAPA-204ENST00000577901 CCDC32Q9BV29 185 aa12.08□□□□□ -0.48
VAPA-204ENST00000577901 ZNF436Q9C0F3 470 aaPredicted RBP12.08□□□□□ -0.48
VAPA-204ENST00000577901 BATF3Q9NR55 127 aa12.08□□□□□ -0.48
VAPA-204ENST00000577901 F8W735 103 aaPredicted RBP12.07□□□□□ -0.48
VAPA-204ENST00000577901 NDUFA4O00483 81 aa12.07□□□□□ -0.48
VAPA-204ENST00000577901 GNG7O60262 68 aa12.07□□□□□ -0.48
VAPA-204ENST00000577901 NXPH3O95157 252 aa12.07□□□□□ -0.48
VAPA-204ENST00000577901 CTSGP08311 255 aa12.07□□□□□ -0.48
VAPA-204ENST00000577901 NPBWR1P48145 328 aa12.07□□□□□ -0.48
VAPA-204ENST00000577901 RELQ04864 619 aaPredicted RBP12.07□□□□□ -0.48
VAPA-204ENST00000577901 DEFB114Q30KQ6 69 aa12.07□□□□□ -0.48
VAPA-204ENST00000577901 ANKRD55Q3KP44 614 aa12.07□□□□□ -0.48
VAPA-204ENST00000577901 PVRIGQ6DKI7 326 aa12.07□□□□□ -0.48
VAPA-204ENST00000577901 UNQ9165/PRO28630Q6UXU0 137 aa12.07□□□□□ -0.48
VAPA-204ENST00000577901 NOXA1Q86UR1 476 aa12.07□□□□□ -0.48
VAPA-204ENST00000577901 OR1S1Q8NH92 325 aa12.07□□□□□ -0.48
VAPA-204ENST00000577901 CHRDL1Q9BU40 450 aa12.07□□□□□ -0.48
VAPA-204ENST00000577901 TMED3Q9Y3Q3 217 aa12.07□□□□□ -0.48
VAPA-204ENST00000577901 TMEM213A2RRL7 107 aa12.06□□□□□ -0.48
VAPA-204ENST00000577901 JTBO76095 146 aa12.06□□□□□ -0.48
VAPA-204ENST00000577901 IGHV3-48P01763 117 aa12.06□□□□□ -0.48
VAPA-204ENST00000577901 OPRK1P41145 380 aa12.06□□□□□ -0.48
VAPA-204ENST00000577901 TNFRSF9Q07011 255 aa12.06□□□□□ -0.48
VAPA-204ENST00000577901 BSXQ3C1V8 233 aa12.06□□□□□ -0.48
VAPA-204ENST00000577901 CD300EQ496F6 205 aaPredicted RBP12.06□□□□□ -0.48
VAPA-204ENST00000577901 TM4SF20Q53R12 229 aa12.06□□□□□ -0.48
VAPA-204ENST00000577901 SLC24A4Q8NFF2 622 aa12.06□□□□□ -0.48
VAPA-204ENST00000577901 PTTG2Q9NZH5 202 aa12.06□□□□□ -0.48
VAPA-204ENST00000577901 MRPL27Q9P0M9 148 aaKnown RBP12.06□□□□□ -0.48
VAPA-204ENST00000577901 HSPB7Q9UBY9 170 aa12.06□□□□□ -0.48
VAPA-204ENST00000577901 FLVCR2Q9UPI3 526 aa12.06□□□□□ -0.48
VAPA-204ENST00000577901 ALMS1Q8TCU4 4167 aa12.05□□□□□ -0.48
VAPA-204ENST00000577901 RPS10-NUDT3A0A1W2PQS6 291 aa12.05□□□□□ -0.48
VAPA-204ENST00000577901 C9orf170A2RU37 121 aa12.05□□□□□ -0.48
VAPA-204ENST00000577901 IZUMO1RA6ND01 250 aa12.05□□□□□ -0.48
VAPA-204ENST00000577901 PLA2G10O15496 165 aa12.05□□□□□ -0.48
VAPA-204ENST00000577901 LYRM1O43325 122 aa12.05□□□□□ -0.48
VAPA-204ENST00000577901 SLC25A6P12236 298 aa12.05□□□□□ -0.48
VAPA-204ENST00000577901 BTCP35070 178 aa12.05□□□□□ -0.48
VAPA-204ENST00000577901 ADMP35318 185 aa12.05□□□□□ -0.48
VAPA-204ENST00000577901 C4orf46Q504U0 113 aa12.05□□□□□ -0.48
VAPA-204ENST00000577901 UXS1Q8NBZ7 420 aa12.05□□□□□ -0.48
VAPA-204ENST00000577901 COQ8AQ8NI60 647 aa12.05□□□□□ -0.48
VAPA-204ENST00000577901 CACNG8Q8WXS5 425 aa12.05□□□□□ -0.48
VAPA-204ENST00000577901 TMEM190Q8WZ59 177 aa12.05□□□□□ -0.48
VAPA-204ENST00000577901 C20orf24Q9BUV8 137 aa12.05□□□□□ -0.48
VAPA-204ENST00000577901 RETNQ9HD89 108 aa12.05□□□□□ -0.48
VAPA-204ENST00000577901 K7EMT4 169 aa12.04□□□□□ -0.48
VAPA-204ENST00000577901 SCGB2A1O75556 95 aa12.04□□□□□ -0.48
VAPA-204ENST00000577901 YIF1AO95070 293 aa12.04□□□□□ -0.48
VAPA-204ENST00000577901 HOXB5P09067 269 aa12.04□□□□□ -0.48
VAPA-204ENST00000577901 OR4E1P0C645 316 aa12.04□□□□□ -0.48
VAPA-204ENST00000577901 C8orf88P0DMB2 117 aa12.04□□□□□ -0.48
VAPA-204ENST00000577901 EDN2P20800 178 aa12.04□□□□□ -0.48
VAPA-204ENST00000577901 C2orf83Q53S99 150 aa12.04□□□□□ -0.48
VAPA-204ENST00000577901 IL17DQ8TAD2 202 aa12.04□□□□□ -0.48
VAPA-204ENST00000577901 RNASEH2CQ8TDP1 164 aaKnown RBP12.04□□□□□ -0.48
VAPA-204ENST00000577901 DTD1Q8TEA8 209 aa12.04□□□□□ -0.48
VAPA-204ENST00000577901 WDR12Q9GZL7 423 aaKnown RBP12.04□□□□□ -0.48
VAPA-204ENST00000577901 RBKSQ9H477 322 aa12.04□□□□□ -0.48
VAPA-204ENST00000577901 DAZ1Q9NQZ3 744 aaKnown RBP12.04□□□□□ -0.48
VAPA-204ENST00000577901 U3KQ87 197 aa12.04□□□□□ -0.48
VAPA-204ENST00000577901 C15orf62A8K5M9 175 aa12.03□□□□□ -0.48
VAPA-204ENST00000577901 PITX3O75364 302 aa12.03□□□□□ -0.48
VAPA-204ENST00000577901 TMEM50AO95807 157 aa12.03□□□□□ -0.48
VAPA-204ENST00000577901 IFNA10P01566 189 aa12.03□□□□□ -0.48
VAPA-204ENST00000577901 ANXA7P20073 488 aaKnown RBP12.03□□□□□ -0.48
VAPA-204ENST00000577901 NPY1RP25929 384 aa12.03□□□□□ -0.48
VAPA-204ENST00000577901 ATP5IP56385 69 aaPredicted RBP12.03□□□□□ -0.48
VAPA-204ENST00000577901 ETFRF1Q6IPR1 90 aa12.03□□□□□ -0.48
VAPA-204ENST00000577901 LYG2Q86SG7 212 aa12.03□□□□□ -0.48
VAPA-204ENST00000577901 FAM110AQ9BQ89 295 aa12.03□□□□□ -0.48
VAPA-204ENST00000577901 FAM90A26D6RGX4 464 aa12.02□□□□□ -0.49
VAPA-204ENST00000577901 MED6O75586 246 aa12.02□□□□□ -0.49
VAPA-204ENST00000577901 IFNA21P01568 189 aa12.02□□□□□ -0.49
VAPA-204ENST00000577901 DHRS2Q13268 280 aa12.02□□□□□ -0.49
VAPA-204ENST00000577901 ZNF846Q147U1 533 aa12.02□□□□□ -0.49
VAPA-204ENST00000577901 MLANAQ16655 118 aa12.02□□□□□ -0.49
VAPA-204ENST00000577901 GUCA2BQ16661 112 aa12.02□□□□□ -0.49
VAPA-204ENST00000577901 GGNBP1Q5YKI7 109 aa12.02□□□□□ -0.49
VAPA-204ENST00000577901 LINC00322Q6ZN03 302 aaPredicted RBP12.02□□□□□ -0.49
VAPA-204ENST00000577901 OR4X1Q8NH49 305 aa12.02□□□□□ -0.49
VAPA-204ENST00000577901 C20orf85Q9H1P6 137 aa12.02□□□□□ -0.49
VAPA-204ENST00000577901 FNDC4Q9H6D8 234 aaPredicted RBP12.02□□□□□ -0.49
VAPA-204ENST00000577901 MLXQ9UH92 298 aa12.02□□□□□ -0.49
VAPA-204ENST00000577901 TRAV30A0A087WSZ9 112 aa12.01□□□□□ -0.49
VAPA-204ENST00000577901 TRAV25A0A0B4J276 109 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms